EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000008951 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(rC)-binding protein 3
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 48902 bases
Position: chrKB743685.1:180721-229622
Accession: 101789676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000008679	KH_1	PF00013.29	3.5e-55	1	3
ENSAPLP00000008679	KH_1	PF00013.29	3.5e-55	2	3
ENSAPLP00000008679	KH_1	PF00013.29	3.5e-55	3	3
ENSAPLP00000008679	KH_2	PF07650.17	2.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009362	-	1344	XM_005024886	ENSAPLP00000008679	447 (aa)	-	U3IN56

Gene Model

Click here to download ENSAPLG00000008951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000008951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000008951	-	80	76.216	ENSAPLG00000002975	-	97	76.216
ENSAPLG00000008951	-	77	33.803	ENSAPLG00000011238	FUBP3	62	33.803
ENSAPLG00000008951	-	56	47.945	ENSAPLG00000010986	-	59	44.304
ENSAPLG00000008951	-	57	46.667	ENSAPLG00000010856	-	58	46.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000008951	-	82	75.477	ENSAPOG00000016582	-	98	75.477	Acanthochromis_polyacanthus
ENSAPLG00000008951	-	79	74.366	ENSAPOG00000020003	pcbp3	85	74.366	Acanthochromis_polyacanthus
ENSAPLG00000008951	-	80	78.202	ENSAMEG00000001697	-	97	78.202	Ailuropoda_melanoleuca
ENSAPLG00000008951	-	79	76.136	ENSACIG00000002739	-	95	76.136	Amphilophus_citrinellus
ENSAPLG00000008951	-	82	75.749	ENSACIG00000010933	pcbp3	98	75.749	Amphilophus_citrinellus
ENSAPLG00000008951	-	78	72.404	ENSAOCG00000007806	-	98	72.404	Amphiprion_ocellaris
ENSAPLG00000008951	-	79	76.771	ENSAOCG00000008592	-	96	76.771	Amphiprion_ocellaris
ENSAPLG00000008951	-	82	77.507	ENSAPEG00000008011	pcbp3	98	77.507	Amphiprion_percula
ENSAPLG00000008951	-	79	76.136	ENSAPEG00000005209	-	95	76.136	Amphiprion_percula
ENSAPLG00000008951	-	79	75.568	ENSATEG00000009833	-	95	75.568	Anabas_testudineus
ENSAPLG00000008951	-	78	78.286	ENSATEG00000015787	-	98	78.286	Anabas_testudineus
ENSAPLG00000008951	-	81	90.278	ENSACAG00000009819	-	97	90.278	Anolis_carolinensis
ENSAPLG00000008951	-	80	78.191	ENSACAG00000004607	-	97	78.191	Anolis_carolinensis
ENSAPLG00000008951	-	77	74.275	ENSANAG00000030702	-	96	74.275	Aotus_nancymaae
ENSAPLG00000008951	-	82	74.932	ENSACLG00000003801	-	98	74.932	Astatotilapia_calliptera
ENSAPLG00000008951	-	82	77.507	ENSACLG00000011835	pcbp3	98	77.507	Astatotilapia_calliptera
ENSAPLG00000008951	-	78	74.571	ENSAMXG00000013588	-	97	74.571	Astyanax_mexicanus
ENSAPLG00000008951	-	100	64.211	ENSAMXG00000001760	zgc:110045	100	62.947	Astyanax_mexicanus
ENSAPLG00000008951	-	83	78.976	ENSAMXG00000003440	pcbp3	99	78.976	Astyanax_mexicanus
ENSAPLG00000008951	-	77	75.801	ENSCAFG00020019472	-	78	82.805	Canis_lupus_dingo
ENSAPLG00000008951	-	80	78.371	ENSCSAG00000007440	-	88	78.371	Chlorocebus_sabaeus
ENSAPLG00000008951	-	80	79.213	ENSCPBG00000012151	-	97	75.000	Chrysemys_picta_bellii
ENSAPLG00000008951	-	100	85.300	ENSCPBG00000000733	-	100	99.543	Chrysemys_picta_bellii
ENSAPLG00000008951	-	78	74.571	ENSCSEG00000000822	pcbp3	87	86.730	Cynoglossus_semilaevis
ENSAPLG00000008951	-	79	67.308	ENSCSEG00000016984	-	75	89.840	Cynoglossus_semilaevis
ENSAPLG00000008951	-	82	75.204	ENSCVAG00000005262	-	98	75.204	Cyprinodon_variegatus
ENSAPLG00000008951	-	82	77.507	ENSCVAG00000014482	pcbp3	98	77.507	Cyprinodon_variegatus
ENSAPLG00000008951	-	77	86.000	ENSDARG00000054378	pcbp3	98	79.292	Danio_rerio
ENSAPLG00000008951	-	80	67.416	ENSETEG00000015988	-	97	67.416	Echinops_telfairi
ENSAPLG00000008951	-	77	62.975	ENSEBUG00000016192	pcbp3	99	62.975	Eptatretus_burgeri
ENSAPLG00000008951	-	81	58.703	ENSEBUG00000005495	pcbp3	73	58.703	Eptatretus_burgeri
ENSAPLG00000008951	-	98	63.519	ENSEBUG00000007485	-	95	71.600	Eptatretus_burgeri
ENSAPLG00000008951	-	82	78.474	ENSELUG00000003521	pcbp3	97	78.474	Esox_lucius
ENSAPLG00000008951	-	82	75.683	ENSELUG00000001560	-	94	73.569	Esox_lucius
ENSAPLG00000008951	-	80	79.213	ENSFALG00000003949	-	97	79.213	Ficedula_albicollis
ENSAPLG00000008951	-	100	92.616	ENSFALG00000004411	-	100	92.616	Ficedula_albicollis
ENSAPLG00000008951	-	82	72.877	ENSFHEG00000016615	pcbp3	97	72.877	Fundulus_heteroclitus
ENSAPLG00000008951	-	79	75.568	ENSFHEG00000006539	-	95	75.568	Fundulus_heteroclitus
ENSAPLG00000008951	-	80	56.117	ENSGMOG00000008611	-	98	56.989	Gadus_morhua
ENSAPLG00000008951	-	79	65.957	ENSGMOG00000011992	pcbp3	95	66.489	Gadus_morhua
ENSAPLG00000008951	-	80	76.330	ENSGALG00000004394	-	100	78.095	Gallus_gallus
ENSAPLG00000008951	-	81	92.308	ENSGALG00000013155	-	96	92.308	Gallus_gallus
ENSAPLG00000008951	-	79	76.204	ENSGAFG00000011430	pcbp3	94	76.204	Gambusia_affinis
ENSAPLG00000008951	-	82	75.204	ENSGAFG00000010274	-	98	75.204	Gambusia_affinis
ENSAPLG00000008951	-	79	73.514	ENSGACG00000002266	-	94	73.514	Gasterosteus_aculeatus
ENSAPLG00000008951	-	78	70.541	ENSGACG00000014955	-	95	70.541	Gasterosteus_aculeatus
ENSAPLG00000008951	-	62	80.645	ENSGAGG00000006956	-	88	80.645	Gopherus_agassizii
ENSAPLG00000008951	-	95	80.711	ENSGAGG00000000271	-	100	84.127	Gopherus_agassizii
ENSAPLG00000008951	-	82	74.932	ENSHBUG00000021782	-	98	74.932	Haplochromis_burtoni
ENSAPLG00000008951	-	82	77.507	ENSHBUG00000010697	pcbp3	98	77.507	Haplochromis_burtoni
ENSAPLG00000008951	-	82	77.717	ENSHCOG00000017868	pcbp3	98	77.717	Hippocampus_comes
ENSAPLG00000008951	-	79	60.563	ENSHCOG00000006067	-	95	72.159	Hippocampus_comes
ENSAPLG00000008951	-	56	57.635	ENSIPUG00000003914	zgc:110045	100	59.113	Ictalurus_punctatus
ENSAPLG00000008951	-	79	81.818	ENSIPUG00000006238	pcbp3	95	81.818	Ictalurus_punctatus
ENSAPLG00000008951	-	82	77.507	ENSKMAG00000003046	pcbp3	98	77.507	Kryptolebias_marmoratus
ENSAPLG00000008951	-	81	75.068	ENSKMAG00000018530	-	97	75.068	Kryptolebias_marmoratus
ENSAPLG00000008951	-	79	74.432	ENSLBEG00000006201	pcbp3	93	74.432	Labrus_bergylta
ENSAPLG00000008951	-	84	81.003	ENSLACG00000010386	pcbp3	79	81.003	Latimeria_chalumnae
ENSAPLG00000008951	-	100	86.128	ENSLACG00000010804	zgc:110045	100	87.212	Latimeria_chalumnae
ENSAPLG00000008951	-	80	82.022	ENSLOCG00000009369	pcbp3	97	82.022	Lepisosteus_oculatus
ENSAPLG00000008951	-	100	84.265	ENSLOCG00000005058	zgc:110045	100	85.325	Lepisosteus_oculatus
ENSAPLG00000008951	-	81	73.333	ENSMAMG00000022336	pcbp3	94	73.333	Mastacembelus_armatus
ENSAPLG00000008951	-	79	75.852	ENSMAMG00000011620	-	95	75.852	Mastacembelus_armatus
ENSAPLG00000008951	-	82	68.966	ENSMZEG00005014882	-	98	71.390	Maylandia_zebra
ENSAPLG00000008951	-	82	75.749	ENSMZEG00005008993	pcbp3	98	75.749	Maylandia_zebra
ENSAPLG00000008951	-	100	90.506	ENSMGAG00000006794	-	100	89.662	Meleagris_gallopavo
ENSAPLG00000008951	-	80	70.822	ENSMGAG00000001883	-	97	71.693	Meleagris_gallopavo
ENSAPLG00000008951	-	79	73.803	ENSMMOG00000000730	pcbp3	86	73.803	Mola_mola
ENSAPLG00000008951	-	79	75.000	ENSMMOG00000005216	-	95	75.000	Mola_mola
ENSAPLG00000008951	-	59	70.000	ENSMODG00000027884	-	94	70.000	Monodelphis_domestica
ENSAPLG00000008951	-	82	75.749	ENSMALG00000000691	pcbp3	98	75.749	Monopterus_albus
ENSAPLG00000008951	-	80	68.617	ENSMPUG00000001779	-	89	68.617	Mustela_putorius_furo
ENSAPLG00000008951	-	82	75.749	ENSNBRG00000016409	-	98	75.749	Neolamprologus_brichardi
ENSAPLG00000008951	-	82	73.656	ENSNBRG00000016714	-	98	73.656	Neolamprologus_brichardi
ENSAPLG00000008951	-	79	75.134	ENSOPRG00000003431	-	99	75.134	Ochotona_princeps
ENSAPLG00000008951	-	79	77.273	ENSONIG00000004611	-	95	77.273	Oreochromis_niloticus
ENSAPLG00000008951	-	80	74.670	ENSONIG00000012122	-	98	74.670	Oreochromis_niloticus
ENSAPLG00000008951	-	80	78.371	ENSOCUG00000002696	-	88	78.371	Oryctolagus_cuniculus
ENSAPLG00000008951	-	78	77.143	ENSORLG00000000059	pcbp3	97	77.143	Oryzias_latipes
ENSAPLG00000008951	-	82	75.543	ENSORLG00000022739	-	98	75.543	Oryzias_latipes
ENSAPLG00000008951	-	82	75.272	ENSORLG00020006124	-	98	75.272	Oryzias_latipes_hni
ENSAPLG00000008951	-	78	77.143	ENSORLG00020012671	pcbp3	95	77.143	Oryzias_latipes_hni
ENSAPLG00000008951	-	78	77.143	ENSORLG00015000429	pcbp3	95	77.143	Oryzias_latipes_hsok
ENSAPLG00000008951	-	82	75.543	ENSORLG00015008051	-	98	75.543	Oryzias_latipes_hsok
ENSAPLG00000008951	-	79	77.841	ENSOMEG00000020162	-	95	77.841	Oryzias_melastigma
ENSAPLG00000008951	-	77	74.695	ENSOMEG00000020811	pcbp3	97	74.695	Oryzias_melastigma
ENSAPLG00000008951	-	80	74.346	ENSOGAG00000008044	-	97	74.346	Otolemur_garnettii
ENSAPLG00000008951	-	82	75.749	ENSPKIG00000019329	pcbp3	98	75.749	Paramormyrops_kingsleyae
ENSAPLG00000008951	-	63	86.301	ENSPKIG00000020913	-	95	86.301	Paramormyrops_kingsleyae
ENSAPLG00000008951	-	95	80.964	ENSPSIG00000008350	-	100	82.216	Pelodiscus_sinensis
ENSAPLG00000008951	-	80	67.828	ENSPSIG00000014970	-	97	68.365	Pelodiscus_sinensis
ENSAPLG00000008951	-	82	77.869	ENSPMGG00000022383	pcbp3	98	77.869	Periophthalmus_magnuspinnatus
ENSAPLG00000008951	-	57	92.188	ENSPMAG00000004637	-	99	92.188	Petromyzon_marinus
ENSAPLG00000008951	-	80	64.011	ENSPMAG00000004551	pcbp3	90	64.011	Petromyzon_marinus
ENSAPLG00000008951	-	85	89.520	ENSPCIG00000028092	-	97	82.303	Phascolarctos_cinereus
ENSAPLG00000008951	-	80	71.916	ENSPLAG00000011449	pcbp3	89	71.916	Poecilia_latipinna
ENSAPLG00000008951	-	79	72.877	ENSPLAG00000004074	-	89	72.877	Poecilia_latipinna
ENSAPLG00000008951	-	82	77.297	ENSPMEG00000021239	pcbp3	98	77.297	Poecilia_mexicana
ENSAPLG00000008951	-	82	72.480	ENSPMEG00000006653	-	98	72.480	Poecilia_mexicana
ENSAPLG00000008951	-	79	72.676	ENSPREG00000015736	pcbp3	98	72.676	Poecilia_reticulata
ENSAPLG00000008951	-	79	75.568	ENSPREG00000020585	-	91	82.819	Poecilia_reticulata
ENSAPLG00000008951	-	79	75.000	ENSPNYG00000013205	-	95	75.000	Pundamilia_nyererei
ENSAPLG00000008951	-	79	74.011	ENSPNYG00000012326	pcbp3	94	74.011	Pundamilia_nyererei
ENSAPLG00000008951	-	82	77.717	ENSPNAG00000008541	-	98	77.717	Pygocentrus_nattereri
ENSAPLG00000008951	-	79	77.841	ENSPNAG00000015104	pcbp3	95	77.841	Pygocentrus_nattereri
ENSAPLG00000008951	-	55	63.592	ENSPNAG00000006838	zgc:110045	100	59.709	Pygocentrus_nattereri
ENSAPLG00000008951	-	80	78.371	ENSRNOG00000001245	Pcbp3	97	78.371	Rattus_norvegicus
ENSAPLG00000008951	-	80	70.380	ENSRBIG00000028177	-	97	69.588	Rhinopithecus_bieti
ENSAPLG00000008951	-	80	76.253	ENSSHAG00000007890	-	97	74.734	Sarcophilus_harrisii
ENSAPLG00000008951	-	82	77.929	ENSSFOG00015014706	pcbp3	98	77.929	Scleropages_formosus
ENSAPLG00000008951	-	80	77.374	ENSSFOG00015007118	-	95	77.374	Scleropages_formosus
ENSAPLG00000008951	-	78	80.000	ENSSFOG00015010205	pcbp3	98	80.000	Scleropages_formosus
ENSAPLG00000008951	-	78	74.857	ENSSMAG00000011929	pcbp3	95	74.857	Scophthalmus_maximus
ENSAPLG00000008951	-	82	75.204	ENSSMAG00000003135	-	98	75.204	Scophthalmus_maximus
ENSAPLG00000008951	-	82	73.025	ENSSDUG00000008502	-	98	73.025	Seriola_dumerili
ENSAPLG00000008951	-	78	77.841	ENSSDUG00000011608	pcbp3	96	77.841	Seriola_dumerili
ENSAPLG00000008951	-	78	77.841	ENSSLDG00000008518	pcbp3	96	77.841	Seriola_lalandi_dorsalis
ENSAPLG00000008951	-	82	75.477	ENSSLDG00000020161	-	98	75.477	Seriola_lalandi_dorsalis
ENSAPLG00000008951	-	100	84.375	ENSSPUG00000013214	-	100	86.709	Sphenodon_punctatus
ENSAPLG00000008951	-	77	73.112	ENSSPAG00000004190	-	97	73.112	Stegastes_partitus
ENSAPLG00000008951	-	82	65.668	ENSSPAG00000023341	-	98	65.668	Stegastes_partitus
ENSAPLG00000008951	-	80	72.074	ENSTGUG00000003316	-	97	72.074	Taeniopygia_guttata
ENSAPLG00000008951	-	80	84.831	ENSTGUG00000008158	-	97	84.831	Taeniopygia_guttata
ENSAPLG00000008951	-	77	76.074	ENSTRUG00000006280	-	89	76.074	Takifugu_rubripes
ENSAPLG00000008951	-	82	74.932	ENSTRUG00000013604	pcbp3	84	92.188	Takifugu_rubripes
ENSAPLG00000008951	-	80	76.862	ENSTTRG00000015075	-	97	76.862	Tursiops_truncatus
ENSAPLG00000008951	-	80	74.734	ENSXETG00000011483	pcbp1	97	74.734	Xenopus_tropicalis
ENSAPLG00000008951	-	96	86.245	ENSXETG00000010491	pcbp2	100	86.245	Xenopus_tropicalis
ENSAPLG00000008951	-	82	77.297	ENSXCOG00000020481	pcbp3	98	77.297	Xiphophorus_couchianus
ENSAPLG00000008951	-	82	77.507	ENSXMAG00000008175	pcbp3	98	77.507	Xiphophorus_maculatus
ENSAPLG00000008951	-	82	75.477	ENSXMAG00000028711	-	98	75.477	Xiphophorus_maculatus