EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000008955 (Gene tree)
Gene ID: -
Gene Symbol: RNASEH2B
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 26467 bases
Position: chrKB744073.1:185004-211470
Accession: 101802447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000008665	RNase_H2-Ydr279	PF09468.10	3.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009348	RNASEH2B-201	1451	XM_005026900	ENSAPLP00000008665	271 (aa)	XP_005026957	U3IN42

Gene Model

Click here to download ENSAPLG00000008955's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000008955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000008955	RNASEH2B	99	65.799	ENSG00000136104	RNASEH2B	97	63.362	Homo_sapiens
ENSAPLG00000008955	RNASEH2B	99	66.176	ENSAPOG00000010496	rnaseh2b	83	66.148	Acanthochromis_polyacanthus
ENSAPLG00000008955	RNASEH2B	99	64.338	ENSAMEG00000012040	RNASEH2B	88	64.231	Ailuropoda_melanoleuca
ENSAPLG00000008955	RNASEH2B	96	57.634	ENSACIG00000021991	rnaseh2b	89	55.914	Amphilophus_citrinellus
ENSAPLG00000008955	RNASEH2B	99	65.809	ENSAOCG00000013398	rnaseh2b	83	65.759	Amphiprion_ocellaris
ENSAPLG00000008955	RNASEH2B	99	65.809	ENSAPEG00000006033	rnaseh2b	83	65.759	Amphiprion_percula
ENSAPLG00000008955	RNASEH2B	99	64.706	ENSATEG00000008370	rnaseh2b	83	64.981	Anabas_testudineus
ENSAPLG00000008955	RNASEH2B	99	70.956	ENSACAG00000011679	RNASEH2B	87	70.930	Anolis_carolinensis
ENSAPLG00000008955	RNASEH2B	99	65.056	ENSANAG00000020662	RNASEH2B	83	65.370	Aotus_nancymaae
ENSAPLG00000008955	RNASEH2B	100	62.637	ENSACLG00000000467	rnaseh2b	84	62.403	Astatotilapia_calliptera
ENSAPLG00000008955	RNASEH2B	99	63.838	ENSAMXG00000014351	rnaseh2b	83	64.062	Astyanax_mexicanus
ENSAPLG00000008955	RNASEH2B	98	63.197	ENSBTAG00000020149	RNASEH2B	84	62.934	Bos_taurus
ENSAPLG00000008955	RNASEH2B	78	60.094	ENSCJAG00000003822	-	79	60.094	Callithrix_jacchus
ENSAPLG00000008955	RNASEH2B	98	64.794	ENSCJAG00000008585	-	85	64.981	Callithrix_jacchus
ENSAPLG00000008955	RNASEH2B	99	63.569	ENSCAFG00000004295	RNASEH2B	84	62.257	Canis_familiaris
ENSAPLG00000008955	RNASEH2B	99	63.569	ENSCAFG00020000250	RNASEH2B	84	63.424	Canis_lupus_dingo
ENSAPLG00000008955	RNASEH2B	85	58.190	ENSCHIG00000012982	-	78	57.658	Capra_hircus
ENSAPLG00000008955	RNASEH2B	98	62.547	ENSCHIG00000018220	RNASEH2B	84	62.257	Capra_hircus
ENSAPLG00000008955	RNASEH2B	99	63.941	ENSTSYG00000009176	-	83	64.202	Carlito_syrichta
ENSAPLG00000008955	RNASEH2B	98	54.682	ENSTSYG00000031177	-	83	54.475	Carlito_syrichta
ENSAPLG00000008955	RNASEH2B	99	53.903	ENSCAPG00000009978	RNASEH2B	87	54.615	Cavia_aperea
ENSAPLG00000008955	RNASEH2B	99	60.370	ENSCPOG00000032527	RNASEH2B	83	60.465	Cavia_porcellus
ENSAPLG00000008955	RNASEH2B	99	65.056	ENSCCAG00000026979	RNASEH2B	85	65.370	Cebus_capucinus
ENSAPLG00000008955	RNASEH2B	96	65.267	ENSCATG00000031336	RNASEH2B	73	65.759	Cercocebus_atys
ENSAPLG00000008955	RNASEH2B	99	63.569	ENSCLAG00000003517	RNASEH2B	71	63.813	Chinchilla_lanigera
ENSAPLG00000008955	RNASEH2B	97	64.794	ENSCSAG00000017701	RNASEH2B	79	64.615	Chlorocebus_sabaeus
ENSAPLG00000008955	RNASEH2B	100	53.650	ENSCHOG00000013688	RNASEH2B	84	53.668	Choloepus_hoffmanni
ENSAPLG00000008955	RNASEH2B	100	79.044	ENSCPBG00000008684	RNASEH2B	90	76.494	Chrysemys_picta_bellii
ENSAPLG00000008955	RNASEH2B	97	40.714	ENSCING00000016454	-	88	40.714	Ciona_intestinalis
ENSAPLG00000008955	RNASEH2B	99	65.074	ENSCANG00000041511	-	83	65.385	Colobus_angolensis_palliatus
ENSAPLG00000008955	RNASEH2B	99	62.454	ENSCGRG00001000611	Rnaseh2b	83	62.646	Cricetulus_griseus_chok1gshd
ENSAPLG00000008955	RNASEH2B	99	62.454	ENSCGRG00000006077	Rnaseh2b	83	62.646	Cricetulus_griseus_crigri
ENSAPLG00000008955	RNASEH2B	99	63.704	ENSCSEG00000004910	rnaseh2b	86	63.821	Cynoglossus_semilaevis
ENSAPLG00000008955	RNASEH2B	99	62.132	ENSCVAG00000005212	rnaseh2b	83	61.868	Cyprinodon_variegatus
ENSAPLG00000008955	RNASEH2B	99	61.255	ENSDARG00000005128	rnaseh2b	83	61.328	Danio_rerio
ENSAPLG00000008955	RNASEH2B	99	60.000	ENSDNOG00000049666	-	83	60.078	Dasypus_novemcinctus
ENSAPLG00000008955	RNASEH2B	98	56.554	ENSDNOG00000034290	-	83	56.420	Dasypus_novemcinctus
ENSAPLG00000008955	RNASEH2B	99	64.312	ENSDORG00000010708	Rnaseh2b	83	64.591	Dipodomys_ordii
ENSAPLG00000008955	RNASEH2B	96	30.592	FBgn0030507	CG11164	56	33.005	Drosophila_melanogaster
ENSAPLG00000008955	RNASEH2B	94	37.838	ENSEBUG00000005965	rnaseh2b	94	39.357	Eptatretus_burgeri
ENSAPLG00000008955	RNASEH2B	99	64.684	ENSEASG00005017323	RNASEH2B	83	64.591	Equus_asinus_asinus
ENSAPLG00000008955	RNASEH2B	99	64.312	ENSECAG00000014262	RNASEH2B	83	64.202	Equus_caballus
ENSAPLG00000008955	RNASEH2B	99	61.397	ENSELUG00000019560	rnaseh2b	83	61.089	Esox_lucius
ENSAPLG00000008955	RNASEH2B	96	62.595	ENSFCAG00000014257	RNASEH2B	80	62.646	Felis_catus
ENSAPLG00000008955	RNASEH2B	100	89.338	ENSFALG00000008435	RNASEH2B	93	89.338	Ficedula_albicollis
ENSAPLG00000008955	RNASEH2B	99	61.710	ENSFDAG00000009920	RNASEH2B	89	61.868	Fukomys_damarensis
ENSAPLG00000008955	RNASEH2B	99	62.500	ENSFHEG00000012160	rnaseh2b	83	62.257	Fundulus_heteroclitus
ENSAPLG00000008955	RNASEH2B	96	61.654	ENSGMOG00000016830	rnaseh2b	87	62.151	Gadus_morhua
ENSAPLG00000008955	RNASEH2B	100	91.176	ENSGALG00000017015	RNASEH2B	89	91.176	Gallus_gallus
ENSAPLG00000008955	RNASEH2B	99	61.765	ENSGAFG00000021222	rnaseh2b	83	61.479	Gambusia_affinis
ENSAPLG00000008955	RNASEH2B	99	62.455	ENSGACG00000002821	rnaseh2b	84	62.214	Gasterosteus_aculeatus
ENSAPLG00000008955	RNASEH2B	100	79.412	ENSGAGG00000014722	RNASEH2B	97	79.412	Gopherus_agassizii
ENSAPLG00000008955	RNASEH2B	99	65.441	ENSGGOG00000001044	RNASEH2B	83	65.769	Gorilla_gorilla
ENSAPLG00000008955	RNASEH2B	100	63.004	ENSHBUG00000006049	rnaseh2b	85	63.008	Haplochromis_burtoni
ENSAPLG00000008955	RNASEH2B	99	62.454	ENSHGLG00100015953	RNASEH2B	87	62.646	Heterocephalus_glaber_male
ENSAPLG00000008955	RNASEH2B	99	59.341	ENSHCOG00000003318	rnaseh2b	86	60.976	Hippocampus_comes
ENSAPLG00000008955	RNASEH2B	99	62.825	ENSIPUG00000023815	rnaseh2b	83	62.257	Ictalurus_punctatus
ENSAPLG00000008955	RNASEH2B	98	63.670	ENSSTOG00000015126	RNASEH2B	88	63.813	Ictidomys_tridecemlineatus
ENSAPLG00000008955	RNASEH2B	99	64.576	ENSJJAG00000013335	Rnaseh2b	86	65.759	Jaculus_jaculus
ENSAPLG00000008955	RNASEH2B	99	64.338	ENSKMAG00000002198	rnaseh2b	83	64.202	Kryptolebias_marmoratus
ENSAPLG00000008955	RNASEH2B	99	66.667	ENSLBEG00000019331	rnaseh2b	84	66.102	Labrus_bergylta
ENSAPLG00000008955	RNASEH2B	77	64.151	ENSLACG00000010782	RNASEH2B	85	64.151	Latimeria_chalumnae
ENSAPLG00000008955	RNASEH2B	100	64.835	ENSLOCG00000009296	rnaseh2b	83	65.116	Lepisosteus_oculatus
ENSAPLG00000008955	RNASEH2B	99	61.852	ENSLAFG00000030158	RNASEH2B	83	62.016	Loxodonta_africana
ENSAPLG00000008955	RNASEH2B	99	64.945	ENSMFAG00000038464	-	83	65.759	Macaca_fascicularis
ENSAPLG00000008955	RNASEH2B	99	58.088	ENSMMUG00000021746	RNASEH2B	82	62.381	Macaca_mulatta
ENSAPLG00000008955	RNASEH2B	99	64.945	ENSMNEG00000030580	RNASEH2B	83	65.759	Macaca_nemestrina
ENSAPLG00000008955	RNASEH2B	99	64.234	ENSMLEG00000043911	-	83	65.000	Mandrillus_leucophaeus
ENSAPLG00000008955	RNASEH2B	99	65.441	ENSMAMG00000017109	rnaseh2b	83	65.370	Mastacembelus_armatus
ENSAPLG00000008955	RNASEH2B	96	62.835	ENSMZEG00005021926	rnaseh2b	81	62.602	Maylandia_zebra
ENSAPLG00000008955	RNASEH2B	100	92.308	ENSMGAG00000015025	RNASEH2B	95	92.308	Meleagris_gallopavo
ENSAPLG00000008955	RNASEH2B	99	63.197	ENSMAUG00000016520	Rnaseh2b	83	63.424	Mesocricetus_auratus
ENSAPLG00000008955	RNASEH2B	99	63.197	ENSMICG00000000528	RNASEH2B	83	63.424	Microcebus_murinus
ENSAPLG00000008955	RNASEH2B	99	63.971	ENSMMOG00000019799	rnaseh2b	89	63.813	Mola_mola
ENSAPLG00000008955	RNASEH2B	100	73.162	ENSMODG00000010775	RNASEH2B	89	73.162	Monodelphis_domestica
ENSAPLG00000008955	RNASEH2B	99	64.338	ENSMALG00000004463	rnaseh2b	84	64.591	Monopterus_albus
ENSAPLG00000008955	RNASEH2B	82	66.968	MGP_CAROLIEiJ_G0019389	Rnaseh2b	77	67.464	Mus_caroli
ENSAPLG00000008955	RNASEH2B	99	61.993	ENSMUSG00000021932	Rnaseh2b	83	62.646	Mus_musculus
ENSAPLG00000008955	RNASEH2B	99	51.447	MGP_PahariEiJ_G0030407	-	86	51.178	Mus_pahari
ENSAPLG00000008955	RNASEH2B	77	60.000	ENSMPUG00000018010	RNASEH2B	88	60.000	Mustela_putorius_furo
ENSAPLG00000008955	RNASEH2B	99	65.799	ENSMLUG00000004065	-	83	65.759	Myotis_lucifugus
ENSAPLG00000008955	RNASEH2B	100	63.004	ENSNBRG00000003253	rnaseh2b	84	62.403	Neolamprologus_brichardi
ENSAPLG00000008955	RNASEH2B	99	64.706	ENSNLEG00000003804	RNASEH2B	83	65.000	Nomascus_leucogenys
ENSAPLG00000008955	RNASEH2B	99	70.588	ENSMEUG00000003665	RNASEH2B	89	71.154	Notamacropus_eugenii
ENSAPLG00000008955	RNASEH2B	99	63.569	ENSODEG00000006793	-	83	63.813	Octodon_degus
ENSAPLG00000008955	RNASEH2B	80	57.339	ENSODEG00000005412	-	90	57.339	Octodon_degus
ENSAPLG00000008955	RNASEH2B	100	63.004	ENSONIG00000006657	rnaseh2b	84	62.791	Oreochromis_niloticus
ENSAPLG00000008955	RNASEH2B	100	71.119	ENSOANG00000015537	RNASEH2B	96	71.119	Ornithorhynchus_anatinus
ENSAPLG00000008955	RNASEH2B	100	64.338	ENSOCUG00000008904	RNASEH2B	81	64.591	Oryctolagus_cuniculus
ENSAPLG00000008955	RNASEH2B	99	64.444	ENSORLG00000011850	rnaseh2b	85	63.953	Oryzias_latipes
ENSAPLG00000008955	RNASEH2B	99	64.815	ENSORLG00020012081	rnaseh2b	85	64.341	Oryzias_latipes_hni
ENSAPLG00000008955	RNASEH2B	99	64.444	ENSORLG00015015468	rnaseh2b	85	64.341	Oryzias_latipes_hsok
ENSAPLG00000008955	RNASEH2B	99	64.312	ENSOMEG00000012441	rnaseh2b	84	64.202	Oryzias_melastigma
ENSAPLG00000008955	RNASEH2B	99	62.500	ENSOGAG00000016486	RNASEH2B	87	62.692	Otolemur_garnettii
ENSAPLG00000008955	RNASEH2B	98	62.172	ENSOARG00000008701	RNASEH2B	86	61.868	Ovis_aries
ENSAPLG00000008955	RNASEH2B	99	64.706	ENSPPAG00000026374	RNASEH2B	93	61.502	Pan_paniscus
ENSAPLG00000008955	RNASEH2B	99	61.905	ENSPPRG00000012450	RNASEH2B	85	61.686	Panthera_pardus
ENSAPLG00000008955	RNASEH2B	99	62.271	ENSPTIG00000013918	RNASEH2B	93	62.069	Panthera_tigris_altaica
ENSAPLG00000008955	RNASEH2B	99	65.074	ENSPTRG00000005886	RNASEH2B	91	67.227	Pan_troglodytes
ENSAPLG00000008955	RNASEH2B	99	64.234	ENSPANG00000022424	-	83	65.000	Papio_anubis
ENSAPLG00000008955	RNASEH2B	99	57.934	ENSPKIG00000013386	rnaseh2b	88	57.934	Paramormyrops_kingsleyae
ENSAPLG00000008955	RNASEH2B	62	77.381	ENSPSIG00000002224	RNASEH2B	78	77.381	Pelodiscus_sinensis
ENSAPLG00000008955	RNASEH2B	72	63.265	ENSPMGG00000010299	rnaseh2b	89	63.043	Periophthalmus_magnuspinnatus
ENSAPLG00000008955	RNASEH2B	99	64.312	ENSPEMG00000019721	Rnaseh2b	83	64.591	Peromyscus_maniculatus_bairdii
ENSAPLG00000008955	RNASEH2B	93	67.063	ENSPCIG00000014535	-	85	66.667	Phascolarctos_cinereus
ENSAPLG00000008955	RNASEH2B	99	62.044	ENSPFOG00000016722	rnaseh2b	83	61.776	Poecilia_formosa
ENSAPLG00000008955	RNASEH2B	99	62.868	ENSPLAG00000011755	rnaseh2b	83	62.646	Poecilia_latipinna
ENSAPLG00000008955	RNASEH2B	99	62.868	ENSPMEG00000002721	rnaseh2b	83	62.646	Poecilia_mexicana
ENSAPLG00000008955	RNASEH2B	99	62.500	ENSPREG00000007737	rnaseh2b	83	62.257	Poecilia_reticulata
ENSAPLG00000008955	RNASEH2B	99	65.074	ENSPPYG00000005378	RNASEH2B	83	65.385	Pongo_abelii
ENSAPLG00000008955	RNASEH2B	99	63.704	ENSPCOG00000026623	RNASEH2B	83	63.953	Propithecus_coquereli
ENSAPLG00000008955	RNASEH2B	87	62.083	ENSPVAG00000000508	RNASEH2B	90	62.083	Pteropus_vampyrus
ENSAPLG00000008955	RNASEH2B	100	63.004	ENSPNYG00000013552	rnaseh2b	85	63.008	Pundamilia_nyererei
ENSAPLG00000008955	RNASEH2B	99	59.926	ENSPNAG00000024825	rnaseh2b	83	59.922	Pygocentrus_nattereri
ENSAPLG00000008955	RNASEH2B	99	61.993	ENSRNOG00000009192	Rnaseh2b	83	62.646	Rattus_norvegicus
ENSAPLG00000008955	RNASEH2B	99	64.684	ENSRBIG00000028928	-	83	64.981	Rhinopithecus_bieti
ENSAPLG00000008955	RNASEH2B	97	56.818	ENSRBIG00000036017	-	83	56.809	Rhinopithecus_bieti
ENSAPLG00000008955	RNASEH2B	99	64.684	ENSRROG00000018808	-	83	64.981	Rhinopithecus_roxellana
ENSAPLG00000008955	RNASEH2B	79	50.935	ENSRROG00000044915	-	81	50.935	Rhinopithecus_roxellana
ENSAPLG00000008955	RNASEH2B	99	65.056	ENSSBOG00000008081	RNASEH2B	92	65.370	Saimiri_boliviensis_boliviensis
ENSAPLG00000008955	RNASEH2B	100	72.426	ENSSHAG00000016190	RNASEH2B	89	72.426	Sarcophilus_harrisii
ENSAPLG00000008955	RNASEH2B	100	60.073	ENSSFOG00015010190	rnaseh2b	84	60.465	Scleropages_formosus
ENSAPLG00000008955	RNASEH2B	99	63.469	ENSSMAG00000001546	rnaseh2b	83	63.281	Scophthalmus_maximus
ENSAPLG00000008955	RNASEH2B	99	66.176	ENSSDUG00000007567	rnaseh2b	83	66.148	Seriola_dumerili
ENSAPLG00000008955	RNASEH2B	99	64.945	ENSSLDG00000012485	rnaseh2b	82	65.854	Seriola_lalandi_dorsalis
ENSAPLG00000008955	RNASEH2B	96	73.004	ENSSPUG00000006745	-	95	72.727	Sphenodon_punctatus
ENSAPLG00000008955	RNASEH2B	99	66.544	ENSSPAG00000020926	rnaseh2b	83	66.537	Stegastes_partitus
ENSAPLG00000008955	RNASEH2B	98	63.670	ENSSSCG00000024385	RNASEH2B	91	65.385	Sus_scrofa
ENSAPLG00000008955	RNASEH2B	100	90.406	ENSTGUG00000012104	RNASEH2B	100	90.406	Taeniopygia_guttata
ENSAPLG00000008955	RNASEH2B	99	64.706	ENSTRUG00000015098	rnaseh2b	83	64.981	Takifugu_rubripes
ENSAPLG00000008955	RNASEH2B	99	63.333	ENSTNIG00000013861	rnaseh2b	82	63.529	Tetraodon_nigroviridis
ENSAPLG00000008955	RNASEH2B	98	57.778	ENSTTRG00000010761	RNASEH2B	84	57.308	Tursiops_truncatus
ENSAPLG00000008955	RNASEH2B	99	65.428	ENSUAMG00000022849	RNASEH2B	92	65.370	Ursus_americanus
ENSAPLG00000008955	RNASEH2B	99	64.312	ENSUMAG00000018556	RNASEH2B	92	64.202	Ursus_maritimus
ENSAPLG00000008955	RNASEH2B	98	66.418	ENSVPAG00000005679	RNASEH2B	89	66.279	Vicugna_pacos
ENSAPLG00000008955	RNASEH2B	99	63.569	ENSVVUG00000024015	RNASEH2B	77	63.424	Vulpes_vulpes
ENSAPLG00000008955	RNASEH2B	100	69.231	ENSXETG00000020720	rnaseh2b	89	69.231	Xenopus_tropicalis
ENSAPLG00000008955	RNASEH2B	99	60.886	ENSXCOG00000018732	rnaseh2b	84	61.200	Xiphophorus_couchianus
ENSAPLG00000008955	RNASEH2B	99	62.132	ENSXMAG00000022554	rnaseh2b	83	61.868	Xiphophorus_maculatus