EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000009057 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 11620 bases
Position: chrKB743627.1:310157-321776
Accession: 101796760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000008783	PRP21_like_P	PF12230.8	7.4e-51	1	1
ENSAPLP00000008783	Surp	PF01805.20	3.5e-46	1	2
ENSAPLP00000008783	Surp	PF01805.20	3.5e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009468	SF3A1-201	2973	XM_005024605	ENSAPLP00000008783	774 (aa)	XP_005024662	U3ING0

Gene Model

Click here to download ENSAPLG00000009057's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009057	SF3A1	99	93.677	ENSG00000099995	SF3A1	95	94.055	Homo_sapiens
ENSAPLG00000009057	SF3A1	100	84.674	ENSAPOG00000020465	sf3a1	96	84.848	Acanthochromis_polyacanthus
ENSAPLG00000009057	SF3A1	99	93.506	ENSAMEG00000007737	SF3A1	95	94.188	Ailuropoda_melanoleuca
ENSAPLG00000009057	SF3A1	100	84.802	ENSACIG00000020672	sf3a1	96	84.453	Amphilophus_citrinellus
ENSAPLG00000009057	SF3A1	100	84.674	ENSAOCG00000003060	sf3a1	96	84.980	Amphiprion_ocellaris
ENSAPLG00000009057	SF3A1	100	84.802	ENSAPEG00000010735	sf3a1	96	84.980	Amphiprion_percula
ENSAPLG00000009057	SF3A1	99	85.026	ENSATEG00000021201	sf3a1	95	84.585	Anabas_testudineus
ENSAPLG00000009057	SF3A1	99	87.833	ENSACAG00000009415	SF3A1	96	89.535	Anolis_carolinensis
ENSAPLG00000009057	SF3A1	99	93.532	ENSANAG00000032045	SF3A1	95	94.452	Aotus_nancymaae
ENSAPLG00000009057	SF3A1	100	84.891	ENSACLG00000012622	sf3a1	96	85.865	Astatotilapia_calliptera
ENSAPLG00000009057	SF3A1	99	83.700	ENSAMXG00000005382	sf3a1	97	84.625	Astyanax_mexicanus
ENSAPLG00000009057	SF3A1	99	93.290	ENSBTAG00000003390	SF3A1	95	94.188	Bos_taurus
ENSAPLG00000009057	SF3A1	85	44.708	WBGene00004188	prp-21	88	45.010	Caenorhabditis_elegans
ENSAPLG00000009057	SF3A1	99	93.532	ENSCJAG00000010370	SF3A1	95	94.452	Callithrix_jacchus
ENSAPLG00000009057	SF3A1	99	93.290	ENSCAFG00000012559	SF3A1	95	94.188	Canis_familiaris
ENSAPLG00000009057	SF3A1	99	93.290	ENSCAFG00020000838	SF3A1	95	94.188	Canis_lupus_dingo
ENSAPLG00000009057	SF3A1	99	93.161	ENSCHIG00000018642	SF3A1	95	94.055	Capra_hircus
ENSAPLG00000009057	SF3A1	99	93.290	ENSTSYG00000004739	SF3A1	95	94.188	Carlito_syrichta
ENSAPLG00000009057	SF3A1	96	77.036	ENSCAPG00000015414	SF3A1	96	76.902	Cavia_aperea
ENSAPLG00000009057	SF3A1	99	93.548	ENSCPOG00000014589	SF3A1	95	94.055	Cavia_porcellus
ENSAPLG00000009057	SF3A1	99	93.532	ENSCCAG00000032006	SF3A1	95	94.452	Cebus_capucinus
ENSAPLG00000009057	SF3A1	99	93.290	ENSCATG00000029241	SF3A1	95	94.188	Cercocebus_atys
ENSAPLG00000009057	SF3A1	99	93.135	ENSCLAG00000006508	SF3A1	95	93.659	Chinchilla_lanigera
ENSAPLG00000009057	SF3A1	99	93.419	ENSCSAG00000009470	SF3A1	95	94.188	Chlorocebus_sabaeus
ENSAPLG00000009057	SF3A1	60	95.283	ENSCHOG00000005201	SF3A1	64	95.283	Choloepus_hoffmanni
ENSAPLG00000009057	SF3A1	99	96.494	ENSCPBG00000007595	SF3A1	97	96.494	Chrysemys_picta_bellii
ENSAPLG00000009057	SF3A1	96	52.312	ENSCING00000008526	-	96	52.673	Ciona_intestinalis
ENSAPLG00000009057	SF3A1	99	51.210	ENSCSAVG00000005608	-	91	63.559	Ciona_savignyi
ENSAPLG00000009057	SF3A1	99	93.419	ENSCANG00000033564	SF3A1	95	94.188	Colobus_angolensis_palliatus
ENSAPLG00000009057	SF3A1	98	93.701	ENSCGRG00001008933	Sf3a1	95	93.791	Cricetulus_griseus_chok1gshd
ENSAPLG00000009057	SF3A1	98	93.701	ENSCGRG00000006127	Sf3a1	95	93.791	Cricetulus_griseus_crigri
ENSAPLG00000009057	SF3A1	99	83.181	ENSCSEG00000010792	sf3a1	96	82.872	Cynoglossus_semilaevis
ENSAPLG00000009057	SF3A1	99	83.721	ENSCVAG00000004560	sf3a1	96	82.982	Cyprinodon_variegatus
ENSAPLG00000009057	SF3A1	100	82.737	ENSDARG00000041887	sf3a1	96	84.433	Danio_rerio
ENSAPLG00000009057	SF3A1	99	93.050	ENSDNOG00000010629	SF3A1	95	93.412	Dasypus_novemcinctus
ENSAPLG00000009057	SF3A1	99	93.677	ENSDORG00000005613	Sf3a1	95	94.188	Dipodomys_ordii
ENSAPLG00000009057	SF3A1	66	60.291	FBgn0266917	Sf3a1	68	60.482	Drosophila_melanogaster
ENSAPLG00000009057	SF3A1	86	93.871	ENSETEG00000017194	SF3A1	95	93.534	Echinops_telfairi
ENSAPLG00000009057	SF3A1	99	68.244	ENSEBUG00000001285	sf3a1	94	68.774	Eptatretus_burgeri
ENSAPLG00000009057	SF3A1	99	93.653	ENSEASG00005010254	SF3A1	95	94.188	Equus_asinus_asinus
ENSAPLG00000009057	SF3A1	99	93.653	ENSECAG00000023962	SF3A1	95	94.188	Equus_caballus
ENSAPLG00000009057	SF3A1	75	93.443	ENSEEUG00000003159	SF3A1	79	93.443	Erinaceus_europaeus
ENSAPLG00000009057	SF3A1	100	81.552	ENSELUG00000022578	sf3a1	96	82.176	Esox_lucius
ENSAPLG00000009057	SF3A1	99	93.419	ENSFCAG00000011932	SF3A1	95	94.320	Felis_catus
ENSAPLG00000009057	SF3A1	99	98.049	ENSFALG00000006944	SF3A1	97	98.049	Ficedula_albicollis
ENSAPLG00000009057	SF3A1	99	92.903	ENSFDAG00000009560	SF3A1	95	93.791	Fukomys_damarensis
ENSAPLG00000009057	SF3A1	100	83.673	ENSFHEG00000010866	sf3a1	96	84.980	Fundulus_heteroclitus
ENSAPLG00000009057	SF3A1	99	81.558	ENSGMOG00000016024	sf3a1	96	80.105	Gadus_morhua
ENSAPLG00000009057	SF3A1	99	99.610	ENSGALG00000007937	SF3A1	97	99.610	Gallus_gallus
ENSAPLG00000009057	SF3A1	100	83.418	ENSGAFG00000009111	sf3a1	96	83.641	Gambusia_affinis
ENSAPLG00000009057	SF3A1	99	83.203	ENSGACG00000011893	sf3a1	96	82.540	Gasterosteus_aculeatus
ENSAPLG00000009057	SF3A1	95	94.437	ENSGAGG00000000762	SF3A1	95	94.598	Gopherus_agassizii
ENSAPLG00000009057	SF3A1	99	93.677	ENSGGOG00000012631	SF3A1	95	94.055	Gorilla_gorilla
ENSAPLG00000009057	SF3A1	100	84.891	ENSHBUG00000015795	sf3a1	96	85.865	Haplochromis_burtoni
ENSAPLG00000009057	SF3A1	99	93.161	ENSHGLG00000007907	SF3A1	95	94.055	Heterocephalus_glaber_female
ENSAPLG00000009057	SF3A1	99	93.161	ENSHGLG00100013799	SF3A1	95	94.055	Heterocephalus_glaber_male
ENSAPLG00000009057	SF3A1	100	81.026	ENSHCOG00000015423	sf3a1	97	81.266	Hippocampus_comes
ENSAPLG00000009057	SF3A1	100	81.386	ENSIPUG00000002470	sf3a1	97	82.632	Ictalurus_punctatus
ENSAPLG00000009057	SF3A1	99	93.419	ENSSTOG00000013892	SF3A1	95	94.320	Ictidomys_tridecemlineatus
ENSAPLG00000009057	SF3A1	99	93.661	ENSJJAG00000022566	Sf3a1	95	94.320	Jaculus_jaculus
ENSAPLG00000009057	SF3A1	100	82.759	ENSKMAG00000002400	sf3a1	96	84.058	Kryptolebias_marmoratus
ENSAPLG00000009057	SF3A1	100	82.992	ENSLBEG00000022974	sf3a1	96	83.905	Labrus_bergylta
ENSAPLG00000009057	SF3A1	99	86.381	ENSLACG00000003565	SF3A1	96	87.615	Latimeria_chalumnae
ENSAPLG00000009057	SF3A1	100	85.987	ENSLOCG00000008251	sf3a1	96	87.516	Lepisosteus_oculatus
ENSAPLG00000009057	SF3A1	99	93.290	ENSLAFG00000000448	SF3A1	95	94.320	Loxodonta_africana
ENSAPLG00000009057	SF3A1	99	59.610	ENSLAFG00000026032	-	96	59.527	Loxodonta_africana
ENSAPLG00000009057	SF3A1	99	93.290	ENSMFAG00000031979	SF3A1	95	94.055	Macaca_fascicularis
ENSAPLG00000009057	SF3A1	99	93.290	ENSMMUG00000005547	SF3A1	95	94.055	Macaca_mulatta
ENSAPLG00000009057	SF3A1	99	93.419	ENSMNEG00000037229	SF3A1	95	94.188	Macaca_nemestrina
ENSAPLG00000009057	SF3A1	99	93.419	ENSMLEG00000041908	SF3A1	95	94.188	Mandrillus_leucophaeus
ENSAPLG00000009057	SF3A1	99	84.794	ENSMAMG00000006460	sf3a1	95	84.980	Mastacembelus_armatus
ENSAPLG00000009057	SF3A1	100	84.891	ENSMZEG00005009633	sf3a1	96	85.865	Maylandia_zebra
ENSAPLG00000009057	SF3A1	99	99.611	ENSMGAG00000001330	SF3A1	100	99.611	Meleagris_gallopavo
ENSAPLG00000009057	SF3A1	95	89.918	ENSMAUG00000020317	Sf3a1	94	89.918	Mesocricetus_auratus
ENSAPLG00000009057	SF3A1	99	93.032	ENSMICG00000010038	SF3A1	95	94.055	Microcebus_murinus
ENSAPLG00000009057	SF3A1	99	93.144	ENSMOCG00000008438	Sf3a1	95	94.055	Microtus_ochrogaster
ENSAPLG00000009057	SF3A1	100	82.239	ENSMMOG00000015588	sf3a1	96	81.398	Mola_mola
ENSAPLG00000009057	SF3A1	99	94.148	ENSMODG00000009270	SF3A1	95	95.106	Monodelphis_domestica
ENSAPLG00000009057	SF3A1	100	83.929	ENSMALG00000000148	sf3a1	99	83.832	Monopterus_albus
ENSAPLG00000009057	SF3A1	99	92.367	MGP_CAROLIEiJ_G0016029	Sf3a1	95	93.527	Mus_caroli
ENSAPLG00000009057	SF3A1	99	92.367	ENSMUSG00000002129	Sf3a1	95	93.527	Mus_musculus
ENSAPLG00000009057	SF3A1	99	92.238	MGP_PahariEiJ_G0016862	Sf3a1	95	93.395	Mus_pahari
ENSAPLG00000009057	SF3A1	99	92.367	MGP_SPRETEiJ_G0016870	Sf3a1	95	93.527	Mus_spretus
ENSAPLG00000009057	SF3A1	99	93.161	ENSMPUG00000013144	SF3A1	95	94.055	Mustela_putorius_furo
ENSAPLG00000009057	SF3A1	99	93.290	ENSMLUG00000002139	SF3A1	95	94.188	Myotis_lucifugus
ENSAPLG00000009057	SF3A1	99	93.782	ENSNGAG00000016977	Sf3a1	95	93.923	Nannospalax_galili
ENSAPLG00000009057	SF3A1	100	84.547	ENSNBRG00000016642	sf3a1	96	85.865	Neolamprologus_brichardi
ENSAPLG00000009057	SF3A1	99	93.419	ENSNLEG00000003686	SF3A1	95	94.188	Nomascus_leucogenys
ENSAPLG00000009057	SF3A1	95	85.598	ENSMEUG00000008741	SF3A1	95	86.030	Notamacropus_eugenii
ENSAPLG00000009057	SF3A1	99	93.995	ENSOPRG00000016636	SF3A1	95	94.188	Ochotona_princeps
ENSAPLG00000009057	SF3A1	99	93.506	ENSODEG00000002571	SF3A1	95	94.055	Octodon_degus
ENSAPLG00000009057	SF3A1	99	84.334	ENSONIG00000010848	sf3a1	96	84.828	Oreochromis_niloticus
ENSAPLG00000009057	SF3A1	99	93.273	ENSOCUG00000007633	SF3A1	95	94.055	Oryctolagus_cuniculus
ENSAPLG00000009057	SF3A1	96	82.754	ENSORLG00000013050	sf3a1	95	84.945	Oryzias_latipes
ENSAPLG00000009057	SF3A1	98	82.092	ENSORLG00020003236	sf3a1	93	83.671	Oryzias_latipes_hni
ENSAPLG00000009057	SF3A1	100	82.843	ENSORLG00015017411	sf3a1	96	84.941	Oryzias_latipes_hsok
ENSAPLG00000009057	SF3A1	100	83.483	ENSOMEG00000013362	sf3a1	96	84.808	Oryzias_melastigma
ENSAPLG00000009057	SF3A1	99	93.161	ENSOGAG00000012931	SF3A1	95	94.055	Otolemur_garnettii
ENSAPLG00000009057	SF3A1	99	91.097	ENSOARG00000006849	SF3A1	95	91.810	Ovis_aries
ENSAPLG00000009057	SF3A1	99	92.645	ENSPPAG00000041790	SF3A1	95	92.999	Pan_paniscus
ENSAPLG00000009057	SF3A1	99	93.419	ENSPPRG00000004391	SF3A1	95	94.320	Panthera_pardus
ENSAPLG00000009057	SF3A1	99	93.506	ENSPTIG00000000844	SF3A1	98	94.055	Panthera_tigris_altaica
ENSAPLG00000009057	SF3A1	99	93.677	ENSPTRG00000014240	SF3A1	95	94.055	Pan_troglodytes
ENSAPLG00000009057	SF3A1	99	93.419	ENSPANG00000020772	SF3A1	95	94.188	Papio_anubis
ENSAPLG00000009057	SF3A1	85	94.505	ENSPSIG00000012803	SF3A1	93	97.670	Pelodiscus_sinensis
ENSAPLG00000009057	SF3A1	99	83.922	ENSPMGG00000023096	sf3a1	99	84.127	Periophthalmus_magnuspinnatus
ENSAPLG00000009057	SF3A1	98	93.963	ENSPEMG00000009494	Sf3a1	95	94.055	Peromyscus_maniculatus_bairdii
ENSAPLG00000009057	SF3A1	66	80.545	ENSPMAG00000007139	-	87	79.845	Petromyzon_marinus
ENSAPLG00000009057	SF3A1	99	93.774	ENSPCIG00000022692	SF3A1	95	94.709	Phascolarctos_cinereus
ENSAPLG00000009057	SF3A1	95	78.668	ENSPFOG00000016768	sf3a1	93	77.853	Poecilia_formosa
ENSAPLG00000009057	SF3A1	100	83.673	ENSPLAG00000017268	sf3a1	96	84.190	Poecilia_latipinna
ENSAPLG00000009057	SF3A1	86	84.985	ENSPMEG00000019811	sf3a1	98	84.361	Poecilia_mexicana
ENSAPLG00000009057	SF3A1	100	84.056	ENSPREG00000010347	sf3a1	96	84.848	Poecilia_reticulata
ENSAPLG00000009057	SF3A1	99	93.419	ENSPPYG00000011707	SF3A1	95	94.188	Pongo_abelii
ENSAPLG00000009057	SF3A1	59	96.266	ENSPCAG00000003266	SF3A1	56	96.266	Procavia_capensis
ENSAPLG00000009057	SF3A1	99	93.161	ENSPCOG00000026630	SF3A1	95	94.188	Propithecus_coquereli
ENSAPLG00000009057	SF3A1	96	92.771	ENSPVAG00000017719	SF3A1	94	92.771	Pteropus_vampyrus
ENSAPLG00000009057	SF3A1	100	84.891	ENSPNYG00000018706	sf3a1	96	85.865	Pundamilia_nyererei
ENSAPLG00000009057	SF3A1	99	83.571	ENSPNAG00000003721	sf3a1	97	84.100	Pygocentrus_nattereri
ENSAPLG00000009057	SF3A1	99	92.645	ENSRNOG00000005218	Sf3a1	95	93.659	Rattus_norvegicus
ENSAPLG00000009057	SF3A1	99	93.419	ENSRBIG00000032167	SF3A1	95	94.188	Rhinopithecus_bieti
ENSAPLG00000009057	SF3A1	99	93.419	ENSRROG00000044908	SF3A1	95	94.188	Rhinopithecus_roxellana
ENSAPLG00000009057	SF3A1	95	94.150	ENSSBOG00000021960	SF3A1	98	94.286	Saimiri_boliviensis_boliviensis
ENSAPLG00000009057	SF3A1	99	91.085	ENSSHAG00000003666	SF3A1	96	92.196	Sarcophilus_harrisii
ENSAPLG00000009057	SF3A1	99	84.170	ENSSFOG00015004579	sf3a1	96	85.827	Scleropages_formosus
ENSAPLG00000009057	SF3A1	100	81.586	ENSSMAG00000004275	sf3a1	96	81.794	Scophthalmus_maximus
ENSAPLG00000009057	SF3A1	100	84.655	ENSSDUG00000022219	sf3a1	96	84.565	Seriola_dumerili
ENSAPLG00000009057	SF3A1	100	84.655	ENSSLDG00000012642	sf3a1	96	84.565	Seriola_lalandi_dorsalis
ENSAPLG00000009057	SF3A1	99	90.992	ENSSARG00000005960	SF3A1	98	91.017	Sorex_araneus
ENSAPLG00000009057	SF3A1	98	93.515	ENSSPUG00000018863	SF3A1	96	94.510	Sphenodon_punctatus
ENSAPLG00000009057	SF3A1	100	84.783	ENSSPAG00000011856	sf3a1	96	85.092	Stegastes_partitus
ENSAPLG00000009057	SF3A1	99	93.032	ENSSSCG00000010002	SF3A1	95	93.923	Sus_scrofa
ENSAPLG00000009057	SF3A1	99	98.833	ENSTGUG00000010547	SF3A1	100	98.833	Taeniopygia_guttata
ENSAPLG00000009057	SF3A1	100	81.818	ENSTRUG00000006118	sf3a1	96	81.926	Takifugu_rubripes
ENSAPLG00000009057	SF3A1	63	84.328	ENSTNIG00000005713	sf3a1	89	84.956	Tetraodon_nigroviridis
ENSAPLG00000009057	SF3A1	99	86.581	ENSTBEG00000012771	SF3A1	95	87.318	Tupaia_belangeri
ENSAPLG00000009057	SF3A1	99	92.655	ENSTTRG00000001535	SF3A1	95	93.404	Tursiops_truncatus
ENSAPLG00000009057	SF3A1	99	92.458	ENSUAMG00000006750	SF3A1	94	93.342	Ursus_americanus
ENSAPLG00000009057	SF3A1	99	93.506	ENSUMAG00000016665	SF3A1	96	94.055	Ursus_maritimus
ENSAPLG00000009057	SF3A1	99	93.290	ENSVVUG00000003075	SF3A1	95	94.188	Vulpes_vulpes
ENSAPLG00000009057	SF3A1	98	87.368	ENSXETG00000016144	sf3a1	95	86.243	Xenopus_tropicalis
ENSAPLG00000009057	SF3A1	100	83.163	ENSXCOG00000015653	sf3a1	96	83.377	Xiphophorus_couchianus
ENSAPLG00000009057	SF3A1	100	83.291	ENSXMAG00000002753	sf3a1	96	83.509	Xiphophorus_maculatus