EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000009174 (Gene tree)
Gene ID: -
Gene Symbol: PABPN1L
Alias: -
Full Name: polyadenylate-binding protein 2-like
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 1515 bases
Position: chrKB820323.1:43-1557
Accession: 101791322
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000008857	RRM_1	PF00076.22	1.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009542	PABPN1L-201	354	XM_005031602	ENSAPLP00000008857	118 (aa)	XP_005031659	U3INN4

Gene Model

Click here to download ENSAPLG00000009174's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG
apla05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009174's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009174	PABPN1L	81	64.583	ENSACIG00000021400	PABPN1L	65	58.197	Amphilophus_citrinellus
ENSAPLG00000009174	PABPN1L	83	61.000	ENSATEG00000011646	PABPN1L	50	55.906	Anabas_testudineus
ENSAPLG00000009174	PABPN1L	100	75.630	ENSACAG00000013250	PABPN1L	63	75.630	Anolis_carolinensis
ENSAPLG00000009174	PABPN1L	100	88.136	ENSFALG00000003319	PABPN1L	50	88.136	Ficedula_albicollis
ENSAPLG00000009174	PABPN1L	96	81.897	ENSGALG00000006242	PABPN1L	66	81.897	Gallus_gallus
ENSAPLG00000009174	PABPN1L	76	67.033	ENSIPUG00000023583	PABPN1L	62	57.851	Ictalurus_punctatus
ENSAPLG00000009174	PABPN1L	81	65.625	ENSKMAG00000001112	PABPN1L	52	59.322	Kryptolebias_marmoratus
ENSAPLG00000009174	PABPN1L	56	78.788	ENSLACG00000008620	-	67	78.788	Latimeria_chalumnae
ENSAPLG00000009174	PABPN1L	81	64.583	ENSNBRG00000017078	PABPN1L	52	56.693	Neolamprologus_brichardi
ENSAPLG00000009174	PABPN1L	100	78.226	ENSPSIG00000003404	PABPN1L	65	78.226	Pelodiscus_sinensis
ENSAPLG00000009174	PABPN1L	86	58.824	ENSPMGG00000013927	PABPN1L	51	57.391	Periophthalmus_magnuspinnatus
ENSAPLG00000009174	PABPN1L	70	71.084	ENSPCIG00000007038	-	58	71.084	Phascolarctos_cinereus
ENSAPLG00000009174	PABPN1L	81	63.542	ENSPFOG00000007001	PABPN1L	51	53.906	Poecilia_formosa
ENSAPLG00000009174	PABPN1L	93	58.559	ENSPREG00000022533	PABPN1L	52	56.303	Poecilia_reticulata
ENSAPLG00000009174	PABPN1L	100	79.661	ENSSPUG00000007031	PABPN1L	54	79.661	Sphenodon_punctatus
ENSAPLG00000009174	PABPN1L	94	58.929	ENSTRUG00000024725	PABPN1L	53	55.906	Takifugu_rubripes
ENSAPLG00000009174	PABPN1L	99	60.150	ENSXETG00000011258	pabpn1l	61	60.150	Xenopus_tropicalis
ENSAPLG00000009174	PABPN1L	81	63.542	ENSXCOG00000003254	PABPN1L	52	56.303	Xiphophorus_couchianus
ENSAPLG00000009174	PABPN1L	70	68.675	ENSXMAG00000029090	PABPN1L	51	57.018	Xiphophorus_maculatus