EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000009347 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 39117 bases
Position: chrKB744942.1:38784-77900
Accession: 101802209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009104	Ago_hook	PF10427.9	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009791	TNRC6B-201	5007	XM_005029720	ENSAPLP00000009104	1668 (aa)	XP_005029778	U3IPD1

Gene Model

Click here to download ENSAPLG00000009347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000009347	TNRC6B	99	40.752	ENSAPLG00000005456	TNRC6C	96	40.476
ENSAPLG00000009347	TNRC6B	99	39.037	ENSAPLG00000009978	TNRC6A	99	34.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009347	TNRC6B	100	88.765	ENSG00000100354	TNRC6B	98	88.529	Homo_sapiens
ENSAPLG00000009347	TNRC6B	100	81.592	ENSAMEG00000011025	TNRC6B	98	81.316	Ailuropoda_melanoleuca
ENSAPLG00000009347	TNRC6B	100	73.618	ENSACAG00000007281	TNRC6B	98	73.162	Anolis_carolinensis
ENSAPLG00000009347	TNRC6B	100	88.471	ENSANAG00000035042	TNRC6B	98	88.471	Aotus_nancymaae
ENSAPLG00000009347	TNRC6B	66	47.284	ENSAMXG00000008707	tnrc6b	76	47.844	Astyanax_mexicanus
ENSAPLG00000009347	TNRC6B	100	87.317	ENSBTAG00000021076	TNRC6B	98	87.317	Bos_taurus
ENSAPLG00000009347	TNRC6B	90	95.787	ENSCJAG00000002732	TNRC6B	99	95.506	Callithrix_jacchus
ENSAPLG00000009347	TNRC6B	100	88.146	ENSCAFG00000001255	TNRC6B	98	88.146	Canis_familiaris
ENSAPLG00000009347	TNRC6B	99	86.364	ENSCAFG00020002189	TNRC6B	99	86.364	Canis_lupus_dingo
ENSAPLG00000009347	TNRC6B	100	83.533	ENSCHIG00000003491	TNRC6B	98	82.406	Capra_hircus
ENSAPLG00000009347	TNRC6B	100	88.516	ENSTSYG00000011836	TNRC6B	98	88.339	Carlito_syrichta
ENSAPLG00000009347	TNRC6B	100	87.456	ENSCPOG00000005705	TNRC6B	96	87.163	Cavia_porcellus
ENSAPLG00000009347	TNRC6B	99	87.116	ENSCCAG00000019912	TNRC6B	98	87.411	Cebus_capucinus
ENSAPLG00000009347	TNRC6B	99	85.755	ENSCATG00000029291	TNRC6B	99	83.410	Cercocebus_atys
ENSAPLG00000009347	TNRC6B	99	84.593	ENSCLAG00000016942	TNRC6B	96	84.994	Chinchilla_lanigera
ENSAPLG00000009347	TNRC6B	100	81.896	ENSCSAG00000006021	TNRC6B	98	79.566	Chlorocebus_sabaeus
ENSAPLG00000009347	TNRC6B	92	89.421	ENSCPBG00000022932	TNRC6B	99	89.795	Chrysemys_picta_bellii
ENSAPLG00000009347	TNRC6B	100	88.523	ENSCANG00000030776	TNRC6B	98	88.346	Colobus_angolensis_palliatus
ENSAPLG00000009347	TNRC6B	96	83.689	ENSCGRG00001020166	Tnrc6b	96	83.571	Cricetulus_griseus_chok1gshd
ENSAPLG00000009347	TNRC6B	100	83.865	ENSCGRG00000016696	Tnrc6b	98	83.694	Cricetulus_griseus_crigri
ENSAPLG00000009347	TNRC6B	100	84.892	ENSDNOG00000012744	TNRC6B	98	83.637	Dasypus_novemcinctus
ENSAPLG00000009347	TNRC6B	100	85.388	ENSDORG00000003386	Tnrc6b	96	85.388	Dipodomys_ordii
ENSAPLG00000009347	TNRC6B	99	79.765	ENSETEG00000006570	TNRC6B	98	80.235	Echinops_telfairi
ENSAPLG00000009347	TNRC6B	99	88.267	ENSEASG00005005306	TNRC6B	98	88.267	Equus_asinus_asinus
ENSAPLG00000009347	TNRC6B	96	94.030	ENSECAG00000009759	TNRC6B	99	93.532	Equus_caballus
ENSAPLG00000009347	TNRC6B	60	93.066	ENSEEUG00000008690	-	60	92.701	Erinaceus_europaeus
ENSAPLG00000009347	TNRC6B	100	85.219	ENSFCAG00000004791	TNRC6B	96	85.389	Felis_catus
ENSAPLG00000009347	TNRC6B	97	93.642	ENSFALG00000012195	TNRC6B	100	92.870	Ficedula_albicollis
ENSAPLG00000009347	TNRC6B	100	84.274	ENSFDAG00000021368	TNRC6B	96	84.756	Fukomys_damarensis
ENSAPLG00000009347	TNRC6B	99	94.537	ENSGALG00000012050	TNRC6B	96	93.905	Gallus_gallus
ENSAPLG00000009347	TNRC6B	100	88.761	ENSGAGG00000025188	TNRC6B	97	88.876	Gopherus_agassizii
ENSAPLG00000009347	TNRC6B	100	88.706	ENSGGOG00000008444	TNRC6B	98	88.471	Gorilla_gorilla
ENSAPLG00000009347	TNRC6B	100	84.252	ENSHGLG00000009306	TNRC6B	100	80.509	Heterocephalus_glaber_female
ENSAPLG00000009347	TNRC6B	100	84.637	ENSHGLG00100018108	TNRC6B	97	84.664	Heterocephalus_glaber_male
ENSAPLG00000009347	TNRC6B	68	47.318	ENSIPUG00000001515	tnrc6b	78	48.574	Ictalurus_punctatus
ENSAPLG00000009347	TNRC6B	100	84.932	ENSSTOG00000008927	TNRC6B	96	85.160	Ictidomys_tridecemlineatus
ENSAPLG00000009347	TNRC6B	100	84.066	ENSJJAG00000015779	Tnrc6b	96	84.180	Jaculus_jaculus
ENSAPLG00000009347	TNRC6B	50	53.523	ENSLACG00000000628	-	98	58.696	Latimeria_chalumnae
ENSAPLG00000009347	TNRC6B	78	84.677	ENSLAFG00000014473	TNRC6B	97	92.416	Loxodonta_africana
ENSAPLG00000009347	TNRC6B	100	85.437	ENSMFAG00000003862	TNRC6B	99	83.105	Macaca_fascicularis
ENSAPLG00000009347	TNRC6B	100	88.699	ENSMMUG00000021345	TNRC6B	98	88.523	Macaca_mulatta
ENSAPLG00000009347	TNRC6B	100	88.640	ENSMNEG00000042745	TNRC6B	99	88.464	Macaca_nemestrina
ENSAPLG00000009347	TNRC6B	100	88.699	ENSMLEG00000041780	TNRC6B	98	88.523	Mandrillus_leucophaeus
ENSAPLG00000009347	TNRC6B	99	89.477	ENSMGAG00000012333	TNRC6B	98	95.938	Meleagris_gallopavo
ENSAPLG00000009347	TNRC6B	100	84.247	ENSMAUG00000016123	Tnrc6b	97	84.018	Mesocricetus_auratus
ENSAPLG00000009347	TNRC6B	100	88.256	ENSMICG00000014056	TNRC6B	98	87.962	Microcebus_murinus
ENSAPLG00000009347	TNRC6B	96	91.542	ENSMOCG00000020334	Tnrc6b	96	91.045	Microtus_ochrogaster
ENSAPLG00000009347	TNRC6B	100	84.484	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	84.370	Mus_caroli
ENSAPLG00000009347	TNRC6B	100	84.541	ENSMUSG00000047888	Tnrc6b	99	85.685	Mus_musculus
ENSAPLG00000009347	TNRC6B	99	84.866	MGP_PahariEiJ_G0020045	Tnrc6b	96	84.580	Mus_pahari
ENSAPLG00000009347	TNRC6B	100	84.598	MGP_SPRETEiJ_G0020941	Tnrc6b	96	84.484	Mus_spretus
ENSAPLG00000009347	TNRC6B	99	92.190	ENSMPUG00000016442	TNRC6B	99	73.662	Mustela_putorius_furo
ENSAPLG00000009347	TNRC6B	100	81.340	ENSMLUG00000008765	TNRC6B	98	81.118	Myotis_lucifugus
ENSAPLG00000009347	TNRC6B	100	84.243	ENSNGAG00000021294	Tnrc6b	96	84.642	Nannospalax_galili
ENSAPLG00000009347	TNRC6B	89	88.148	ENSNLEG00000015311	TNRC6B	93	88.148	Nomascus_leucogenys
ENSAPLG00000009347	TNRC6B	89	87.129	ENSOPRG00000012054	TNRC6B	86	87.129	Ochotona_princeps
ENSAPLG00000009347	TNRC6B	100	84.576	ENSODEG00000013146	TNRC6B	96	84.917	Octodon_degus
ENSAPLG00000009347	TNRC6B	100	84.620	ENSOCUG00000016128	TNRC6B	96	82.517	Oryctolagus_cuniculus
ENSAPLG00000009347	TNRC6B	100	81.191	ENSOGAG00000011096	TNRC6B	98	80.750	Otolemur_garnettii
ENSAPLG00000009347	TNRC6B	100	83.664	ENSOARG00000017238	TNRC6B	96	82.203	Ovis_aries
ENSAPLG00000009347	TNRC6B	100	88.765	ENSPPAG00000028514	TNRC6B	98	88.529	Pan_paniscus
ENSAPLG00000009347	TNRC6B	100	88.471	ENSPPRG00000017741	TNRC6B	98	88.471	Panthera_pardus
ENSAPLG00000009347	TNRC6B	99	85.596	ENSPTIG00000022064	TNRC6B	98	85.833	Panthera_tigris_altaica
ENSAPLG00000009347	TNRC6B	100	88.817	ENSPTRG00000047826	TNRC6B	98	88.582	Pan_troglodytes
ENSAPLG00000009347	TNRC6B	99	84.647	ENSPANG00000009271	TNRC6B	99	90.083	Papio_anubis
ENSAPLG00000009347	TNRC6B	100	88.037	ENSPSIG00000005318	TNRC6B	98	88.208	Pelodiscus_sinensis
ENSAPLG00000009347	TNRC6B	100	83.428	ENSPEMG00000011403	Tnrc6b	96	83.656	Peromyscus_maniculatus_bairdii
ENSAPLG00000009347	TNRC6B	99	82.450	ENSPCIG00000020347	TNRC6B	99	80.193	Phascolarctos_cinereus
ENSAPLG00000009347	TNRC6B	54	49.325	ENSPFOG00000006033	-	98	38.474	Poecilia_formosa
ENSAPLG00000009347	TNRC6B	68	45.587	ENSPLAG00000001418	-	98	45.744	Poecilia_latipinna
ENSAPLG00000009347	TNRC6B	64	53.431	ENSPMEG00000006371	-	91	53.810	Poecilia_mexicana
ENSAPLG00000009347	TNRC6B	100	88.647	ENSPPYG00000011849	TNRC6B	98	88.412	Pongo_abelii
ENSAPLG00000009347	TNRC6B	77	85.861	ENSPCAG00000008739	TNRC6B	75	85.193	Procavia_capensis
ENSAPLG00000009347	TNRC6B	100	88.256	ENSPCOG00000020790	TNRC6B	98	87.962	Propithecus_coquereli
ENSAPLG00000009347	TNRC6B	93	88.127	ENSPVAG00000004975	TNRC6B	90	88.127	Pteropus_vampyrus
ENSAPLG00000009347	TNRC6B	61	50.775	ENSPNAG00000011713	tnrc6b	90	46.075	Pygocentrus_nattereri
ENSAPLG00000009347	TNRC6B	100	84.345	ENSRNOG00000024907	Tnrc6b	96	83.948	Rattus_norvegicus
ENSAPLG00000009347	TNRC6B	100	88.405	ENSRBIG00000035576	TNRC6B	98	88.228	Rhinopithecus_bieti
ENSAPLG00000009347	TNRC6B	100	88.346	ENSRROG00000031135	TNRC6B	99	88.170	Rhinopithecus_roxellana
ENSAPLG00000009347	TNRC6B	100	88.301	ENSSBOG00000029743	TNRC6B	99	88.301	Saimiri_boliviensis_boliviensis
ENSAPLG00000009347	TNRC6B	99	78.587	ENSSHAG00000009692	TNRC6B	98	77.925	Sarcophilus_harrisii
ENSAPLG00000009347	TNRC6B	73	84.615	ENSSARG00000007971	-	73	84.615	Sorex_araneus
ENSAPLG00000009347	TNRC6B	92	83.035	ENSSPUG00000010801	TNRC6B	100	82.736	Sphenodon_punctatus
ENSAPLG00000009347	TNRC6B	100	85.160	ENSSSCG00000000078	TNRC6B	98	83.219	Sus_scrofa
ENSAPLG00000009347	TNRC6B	93	95.594	ENSTGUG00000010138	-	98	95.594	Taeniopygia_guttata
ENSAPLG00000009347	TNRC6B	99	85.292	ENSTTRG00000011465	TNRC6B	96	85.588	Tursiops_truncatus
ENSAPLG00000009347	TNRC6B	99	88.527	ENSUAMG00000007174	TNRC6B	98	88.527	Ursus_americanus
ENSAPLG00000009347	TNRC6B	100	85.511	ENSUMAG00000014336	TNRC6B	99	85.682	Ursus_maritimus
ENSAPLG00000009347	TNRC6B	67	84.211	ENSVPAG00000001467	TNRC6B	72	83.239	Vicugna_pacos
ENSAPLG00000009347	TNRC6B	100	88.087	ENSVVUG00000007064	TNRC6B	96	87.911	Vulpes_vulpes