EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000009351 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 67052 bases
Position: chrKB742797.1:896168-963219
Accession: 101792623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	1	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	2	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	3	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	4	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	5	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	6	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	7	8
ENSAPLP00000009112	PUF	PF00806.19	7.7e-73	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000009800	PUM1-201	3930	XM_005015451	ENSAPLP00000009112	1189 (aa)	XP_005015508	U3IPD9

Gene Model

Click here to download ENSAPLG00000009351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000009351	PUM1	95	75.923	ENSAPLG00000010496	PUM2	96	75.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009351	PUM1	100	97.729	ENSG00000134644	PUM1	100	98.010	Homo_sapiens
ENSAPLG00000009351	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.566	Acanthochromis_polyacanthus
ENSAPLG00000009351	PUM1	100	97.647	ENSAMEG00000017656	PUM1	97	97.647	Ailuropoda_melanoleuca
ENSAPLG00000009351	PUM1	100	75.166	ENSACIG00000021013	pum1	100	77.254	Amphilophus_citrinellus
ENSAPLG00000009351	PUM1	90	91.566	ENSAOCG00000003944	pum1	100	91.566	Amphiprion_ocellaris
ENSAPLG00000009351	PUM1	90	91.566	ENSAPEG00000014550	pum1	100	91.566	Amphiprion_percula
ENSAPLG00000009351	PUM1	90	91.566	ENSATEG00000016004	pum1	100	91.566	Anabas_testudineus
ENSAPLG00000009351	PUM1	100	96.804	ENSACAG00000000682	PUM1	98	96.804	Anolis_carolinensis
ENSAPLG00000009351	PUM1	100	97.393	ENSANAG00000027865	PUM1	100	98.068	Aotus_nancymaae
ENSAPLG00000009351	PUM1	90	77.130	ENSACLG00000019354	pum1	100	79.575	Astatotilapia_calliptera
ENSAPLG00000009351	PUM1	100	79.783	ENSAMXG00000020607	pum1	96	79.950	Astyanax_mexicanus
ENSAPLG00000009351	PUM1	100	97.393	ENSBTAG00000018979	PUM1	100	98.792	Bos_taurus
ENSAPLG00000009351	PUM1	100	97.561	ENSCJAG00000006035	PUM1	100	98.309	Callithrix_jacchus
ENSAPLG00000009351	PUM1	100	95.542	ENSCAFG00000011205	PUM1	100	95.542	Canis_familiaris
ENSAPLG00000009351	PUM1	91	96.774	ENSCAFG00020024616	PUM1	98	98.309	Canis_lupus_dingo
ENSAPLG00000009351	PUM1	100	97.393	ENSCHIG00000012952	PUM1	100	98.309	Capra_hircus
ENSAPLG00000009351	PUM1	100	97.393	ENSTSYG00000008868	PUM1	100	97.761	Carlito_syrichta
ENSAPLG00000009351	PUM1	100	97.561	ENSCPOG00000031613	PUM1	100	97.761	Cavia_porcellus
ENSAPLG00000009351	PUM1	100	95.458	ENSCATG00000017991	PUM1	100	98.792	Cercocebus_atys
ENSAPLG00000009351	PUM1	100	97.477	ENSCLAG00000007662	PUM1	100	97.761	Chinchilla_lanigera
ENSAPLG00000009351	PUM1	100	96.833	ENSCSAG00000001028	PUM1	100	96.833	Chlorocebus_sabaeus
ENSAPLG00000009351	PUM1	93	93.966	ENSCHOG00000010245	PUM1	93	93.966	Choloepus_hoffmanni
ENSAPLG00000009351	PUM1	100	98.486	ENSCPBG00000009288	PUM1	100	99.034	Chrysemys_picta_bellii
ENSAPLG00000009351	PUM1	100	97.645	ENSCANG00000042606	PUM1	100	98.309	Colobus_angolensis_palliatus
ENSAPLG00000009351	PUM1	100	96.804	ENSCGRG00001024949	Pum1	100	97.139	Cricetulus_griseus_chok1gshd
ENSAPLG00000009351	PUM1	100	96.804	ENSCGRG00000014197	Pum1	100	97.139	Cricetulus_griseus_crigri
ENSAPLG00000009351	PUM1	90	76.481	ENSCSEG00000015981	pum1	100	78.261	Cynoglossus_semilaevis
ENSAPLG00000009351	PUM1	100	74.359	ENSCVAG00000007043	pum1	100	76.383	Cyprinodon_variegatus
ENSAPLG00000009351	PUM1	100	79.616	ENSDARG00000099256	pum1	100	79.950	Danio_rerio
ENSAPLG00000009351	PUM1	100	97.225	ENSDNOG00000010939	PUM1	100	97.225	Dasypus_novemcinctus
ENSAPLG00000009351	PUM1	85	97.826	ENSDORG00000001875	Pum1	100	97.826	Dipodomys_ordii
ENSAPLG00000009351	PUM1	88	92.390	ENSETEG00000004355	PUM1	87	92.390	Echinops_telfairi
ENSAPLG00000009351	PUM1	100	97.309	ENSEASG00005010813	PUM1	100	97.309	Equus_asinus_asinus
ENSAPLG00000009351	PUM1	100	97.309	ENSECAG00000021369	PUM1	100	97.309	Equus_caballus
ENSAPLG00000009351	PUM1	76	99.111	ENSEEUG00000003871	PUM1	74	99.111	Erinaceus_europaeus
ENSAPLG00000009351	PUM1	100	76.398	ENSELUG00000002409	pum1	100	83.560	Esox_lucius
ENSAPLG00000009351	PUM1	100	97.729	ENSFCAG00000010374	PUM1	100	98.792	Felis_catus
ENSAPLG00000009351	PUM1	100	97.404	ENSFALG00000001214	PUM1	97	97.404	Ficedula_albicollis
ENSAPLG00000009351	PUM1	100	97.393	ENSFDAG00000011319	PUM1	100	97.637	Fukomys_damarensis
ENSAPLG00000009351	PUM1	100	99.748	ENSGALG00000042598	PUM1	100	99.748	Gallus_gallus
ENSAPLG00000009351	PUM1	90	88.046	ENSGAFG00000015617	pum1	100	91.084	Gambusia_affinis
ENSAPLG00000009351	PUM1	100	75.227	ENSGACG00000005717	pum1	100	76.936	Gasterosteus_aculeatus
ENSAPLG00000009351	PUM1	100	98.486	ENSGAGG00000001290	PUM1	99	99.595	Gopherus_agassizii
ENSAPLG00000009351	PUM1	100	97.645	ENSGGOG00000011983	PUM1	100	98.309	Gorilla_gorilla
ENSAPLG00000009351	PUM1	100	74.690	ENSHBUG00000018718	pum1	100	76.796	Haplochromis_burtoni
ENSAPLG00000009351	PUM1	100	97.225	ENSHGLG00000013819	Pum1	100	97.512	Heterocephalus_glaber_female
ENSAPLG00000009351	PUM1	100	97.225	ENSHGLG00100008621	Pum1	100	97.512	Heterocephalus_glaber_male
ENSAPLG00000009351	PUM1	90	75.578	ENSHCOG00000005149	pum1	100	75.856	Hippocampus_comes
ENSAPLG00000009351	PUM1	100	77.805	ENSIPUG00000020421	pum1	100	78.738	Ictalurus_punctatus
ENSAPLG00000009351	PUM1	100	97.477	ENSSTOG00000010757	PUM1	100	97.761	Ictidomys_tridecemlineatus
ENSAPLG00000009351	PUM1	100	97.225	ENSJJAG00000000530	Pum1	100	97.388	Jaculus_jaculus
ENSAPLG00000009351	PUM1	100	74.751	ENSKMAG00000003481	pum1	100	76.783	Kryptolebias_marmoratus
ENSAPLG00000009351	PUM1	100	74.151	ENSLBEG00000002527	pum1	100	76.427	Labrus_bergylta
ENSAPLG00000009351	PUM1	100	87.677	ENSLACG00000017188	PUM1	99	87.843	Latimeria_chalumnae
ENSAPLG00000009351	PUM1	100	88.815	ENSLOCG00000005210	pum1	99	88.982	Lepisosteus_oculatus
ENSAPLG00000009351	PUM1	100	97.140	ENSLAFG00000003178	PUM1	100	97.140	Loxodonta_africana
ENSAPLG00000009351	PUM1	100	97.402	ENSMFAG00000010291	PUM1	100	98.792	Macaca_fascicularis
ENSAPLG00000009351	PUM1	100	97.402	ENSMMUG00000013520	PUM1	100	98.309	Macaca_mulatta
ENSAPLG00000009351	PUM1	100	97.645	ENSMNEG00000034639	PUM1	100	98.309	Macaca_nemestrina
ENSAPLG00000009351	PUM1	100	97.645	ENSMLEG00000038743	PUM1	100	98.309	Mandrillus_leucophaeus
ENSAPLG00000009351	PUM1	100	74.938	ENSMAMG00000011606	pum1	100	77.044	Mastacembelus_armatus
ENSAPLG00000009351	PUM1	100	74.690	ENSMZEG00005005834	pum1	100	76.796	Maylandia_zebra
ENSAPLG00000009351	PUM1	100	99.495	ENSMGAG00000000724	PUM1	100	99.495	Meleagris_gallopavo
ENSAPLG00000009351	PUM1	100	97.140	ENSMAUG00000022090	Pum1	100	97.264	Mesocricetus_auratus
ENSAPLG00000009351	PUM1	99	95.451	ENSMICG00000012213	-	100	95.169	Microcebus_murinus
ENSAPLG00000009351	PUM1	100	97.645	ENSMICG00000007713	-	100	98.551	Microcebus_murinus
ENSAPLG00000009351	PUM1	100	96.972	ENSMOCG00000015463	Pum1	100	97.139	Microtus_ochrogaster
ENSAPLG00000009351	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	91.325	Mola_mola
ENSAPLG00000009351	PUM1	100	97.649	ENSMODG00000017067	PUM1	100	97.649	Monodelphis_domestica
ENSAPLG00000009351	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.566	Monopterus_albus
ENSAPLG00000009351	PUM1	100	96.888	MGP_CAROLIEiJ_G0026549	Pum1	100	97.139	Mus_caroli
ENSAPLG00000009351	PUM1	100	96.972	ENSMUSG00000028580	Pum1	100	97.015	Mus_musculus
ENSAPLG00000009351	PUM1	100	96.804	MGP_PahariEiJ_G0028881	Pum1	100	97.015	Mus_pahari
ENSAPLG00000009351	PUM1	100	96.888	MGP_SPRETEiJ_G0027529	Pum1	100	97.015	Mus_spretus
ENSAPLG00000009351	PUM1	100	97.561	ENSMPUG00000015454	PUM1	100	97.561	Mustela_putorius_furo
ENSAPLG00000009351	PUM1	100	97.225	ENSMLUG00000006490	PUM1	100	97.225	Myotis_lucifugus
ENSAPLG00000009351	PUM1	100	97.309	ENSNGAG00000002378	Pum1	100	97.886	Nannospalax_galili
ENSAPLG00000009351	PUM1	80	81.582	ENSNBRG00000010689	pum1	100	83.970	Neolamprologus_brichardi
ENSAPLG00000009351	PUM1	100	96.299	ENSNLEG00000001151	PUM1	100	96.528	Nomascus_leucogenys
ENSAPLG00000009351	PUM1	84	95.608	ENSMEUG00000000976	-	82	95.608	Notamacropus_eugenii
ENSAPLG00000009351	PUM1	83	98.131	ENSOPRG00000001776	PUM1	76	98.131	Ochotona_princeps
ENSAPLG00000009351	PUM1	100	97.225	ENSODEG00000003465	PUM1	100	97.637	Octodon_degus
ENSAPLG00000009351	PUM1	100	75.266	ENSONIG00000002290	pum1	100	77.126	Oreochromis_niloticus
ENSAPLG00000009351	PUM1	83	77.324	ENSOANG00000004902	-	100	77.324	Ornithorhynchus_anatinus
ENSAPLG00000009351	PUM1	100	97.056	ENSOCUG00000008641	PUM1	99	97.056	Oryctolagus_cuniculus
ENSAPLG00000009351	PUM1	100	75.350	ENSORLG00000011482	pum1	100	76.708	Oryzias_latipes
ENSAPLG00000009351	PUM1	100	75.433	ENSORLG00020019461	pum1	100	76.708	Oryzias_latipes_hni
ENSAPLG00000009351	PUM1	100	75.433	ENSORLG00015011375	pum1	100	76.790	Oryzias_latipes_hsok
ENSAPLG00000009351	PUM1	90	93.253	ENSOMEG00000009312	pum1	100	91.325	Oryzias_melastigma
ENSAPLG00000009351	PUM1	100	94.710	ENSOGAG00000011063	PUM1	100	94.710	Otolemur_garnettii
ENSAPLG00000009351	PUM1	100	96.720	ENSOARG00000001899	PUM1	100	98.309	Ovis_aries
ENSAPLG00000009351	PUM1	100	97.645	ENSPPAG00000044003	PUM1	100	98.309	Pan_paniscus
ENSAPLG00000009351	PUM1	100	97.645	ENSPPRG00000001370	PUM1	100	98.010	Panthera_pardus
ENSAPLG00000009351	PUM1	100	97.477	ENSPTIG00000010798	PUM1	100	97.761	Panthera_tigris_altaica
ENSAPLG00000009351	PUM1	100	97.645	ENSPTRG00000000453	PUM1	100	98.309	Pan_troglodytes
ENSAPLG00000009351	PUM1	100	97.645	ENSPANG00000016338	PUM1	100	98.792	Papio_anubis
ENSAPLG00000009351	PUM1	100	78.660	ENSPKIG00000010578	pum1	100	78.318	Paramormyrops_kingsleyae
ENSAPLG00000009351	PUM1	100	98.738	ENSPSIG00000014118	PUM1	100	98.738	Pelodiscus_sinensis
ENSAPLG00000009351	PUM1	80	79.927	ENSPMGG00000005836	pum1	100	82.418	Periophthalmus_magnuspinnatus
ENSAPLG00000009351	PUM1	100	97.140	ENSPEMG00000010009	Pum1	100	97.264	Peromyscus_maniculatus_bairdii
ENSAPLG00000009351	PUM1	100	97.733	ENSPCIG00000014151	PUM1	100	99.034	Phascolarctos_cinereus
ENSAPLG00000009351	PUM1	95	77.933	ENSPFOG00000007289	pum1	99	83.180	Poecilia_formosa
ENSAPLG00000009351	PUM1	100	73.714	ENSPLAG00000007256	pum1	100	78.882	Poecilia_latipinna
ENSAPLG00000009351	PUM1	90	77.808	ENSPMEG00000019543	pum1	99	78.952	Poecilia_mexicana
ENSAPLG00000009351	PUM1	100	74.938	ENSPREG00000005195	pum1	100	81.598	Poecilia_reticulata
ENSAPLG00000009351	PUM1	100	95.713	ENSPPYG00000001621	PUM1	100	95.713	Pongo_abelii
ENSAPLG00000009351	PUM1	78	98.765	ENSPCAG00000001979	PUM1	74	98.765	Procavia_capensis
ENSAPLG00000009351	PUM1	100	97.645	ENSPCOG00000004398	PUM1	100	98.551	Propithecus_coquereli
ENSAPLG00000009351	PUM1	100	95.374	ENSPVAG00000005207	PUM1	97	95.374	Pteropus_vampyrus
ENSAPLG00000009351	PUM1	100	74.773	ENSPNYG00000009518	pum1	100	82.169	Pundamilia_nyererei
ENSAPLG00000009351	PUM1	100	80.033	ENSPNAG00000026728	pum1	100	81.126	Pygocentrus_nattereri
ENSAPLG00000009351	PUM1	100	96.720	ENSRNOG00000011709	Pum1	100	96.720	Rattus_norvegicus
ENSAPLG00000009351	PUM1	100	97.645	ENSRBIG00000042521	PUM1	100	98.792	Rhinopithecus_bieti
ENSAPLG00000009351	PUM1	100	97.645	ENSRROG00000020156	PUM1	100	98.309	Rhinopithecus_roxellana
ENSAPLG00000009351	PUM1	100	97.645	ENSSBOG00000032037	PUM1	100	98.309	Saimiri_boliviensis_boliviensis
ENSAPLG00000009351	PUM1	100	97.565	ENSSHAG00000010918	PUM1	100	97.565	Sarcophilus_harrisii
ENSAPLG00000009351	PUM1	90	88.506	ENSSMAG00000010918	pum1	100	91.566	Scophthalmus_maximus
ENSAPLG00000009351	PUM1	100	74.855	ENSSDUG00000009021	pum1	100	77.209	Seriola_dumerili
ENSAPLG00000009351	PUM1	95	76.452	ENSSLDG00000009667	pum1	100	79.296	Seriola_lalandi_dorsalis
ENSAPLG00000009351	PUM1	94	96.865	ENSSARG00000003055	PUM1	91	96.865	Sorex_araneus
ENSAPLG00000009351	PUM1	100	98.318	ENSSPUG00000006267	PUM1	100	98.318	Sphenodon_punctatus
ENSAPLG00000009351	PUM1	90	91.566	ENSSPAG00000016636	pum1	100	91.566	Stegastes_partitus
ENSAPLG00000009351	PUM1	100	98.178	ENSSSCG00000003591	PUM1	100	98.792	Sus_scrofa
ENSAPLG00000009351	PUM1	100	74.752	ENSTRUG00000013121	pum1	100	83.600	Takifugu_rubripes
ENSAPLG00000009351	PUM1	100	75.166	ENSTNIG00000016983	pum1	99	77.280	Tetraodon_nigroviridis
ENSAPLG00000009351	PUM1	87	93.902	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSAPLG00000009351	PUM1	92	97.721	ENSTTRG00000007436	PUM1	90	97.721	Tursiops_truncatus
ENSAPLG00000009351	PUM1	99	97.143	ENSUAMG00000018262	-	100	97.143	Ursus_americanus
ENSAPLG00000009351	PUM1	95	98.792	ENSUMAG00000009211	PUM1	100	98.792	Ursus_maritimus
ENSAPLG00000009351	PUM1	92	98.507	ENSVPAG00000005902	PUM1	92	98.507	Vicugna_pacos
ENSAPLG00000009351	PUM1	100	97.729	ENSVVUG00000014631	PUM1	100	98.792	Vulpes_vulpes
ENSAPLG00000009351	PUM1	100	88.329	ENSXETG00000012904	pum1	99	87.573	Xenopus_tropicalis
ENSAPLG00000009351	PUM1	100	74.276	ENSXMAG00000002945	pum1	100	78.778	Xiphophorus_maculatus