EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000009846 (Gene tree)
Gene ID: -
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 13840 bases
Position: chrKB742550.1:361654-375493
Accession: 101803815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009572	zf-C2H2	PF00096.26	6.1e-20	1	2
ENSAPLP00000009572	zf-C2H2	PF00096.26	6.1e-20	2	2
ENSAPLP00000009572	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000010268	PRDM4-201	2400	XM_005011513	ENSAPLP00000009572	799 (aa)	-	U3IQP9

Gene Model

Click here to download ENSAPLG00000009846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009846's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009846	PRDM4	99	86.842	ENSG00000110851	PRDM4	96	95.833	Homo_sapiens
ENSAPLG00000009846	PRDM4	99	86.859	ENSAMEG00000016174	PRDM4	99	87.109	Ailuropoda_melanoleuca
ENSAPLG00000009846	PRDM4	99	86.591	ENSANAG00000024800	PRDM4	99	87.218	Aotus_nancymaae
ENSAPLG00000009846	PRDM4	99	87.469	ENSBTAG00000012999	PRDM4	99	87.970	Bos_taurus
ENSAPLG00000009846	PRDM4	99	86.466	ENSCJAG00000015261	PRDM4	99	87.093	Callithrix_jacchus
ENSAPLG00000009846	PRDM4	99	87.594	ENSCAFG00000001788	PRDM4	99	88.095	Canis_familiaris
ENSAPLG00000009846	PRDM4	99	87.594	ENSCAFG00020004916	PRDM4	99	88.095	Canis_lupus_dingo
ENSAPLG00000009846	PRDM4	99	87.343	ENSCHIG00000019409	PRDM4	99	87.845	Capra_hircus
ENSAPLG00000009846	PRDM4	99	86.591	ENSTSYG00000009248	PRDM4	99	87.093	Carlito_syrichta
ENSAPLG00000009846	PRDM4	99	83.229	ENSCAPG00000013937	PRDM4	99	83.354	Cavia_aperea
ENSAPLG00000009846	PRDM4	99	82.733	ENSCPOG00000022385	PRDM4	100	82.857	Cavia_porcellus
ENSAPLG00000009846	PRDM4	99	86.717	ENSCCAG00000036033	PRDM4	99	87.343	Cebus_capucinus
ENSAPLG00000009846	PRDM4	99	86.466	ENSCATG00000044797	PRDM4	99	87.093	Cercocebus_atys
ENSAPLG00000009846	PRDM4	99	83.582	ENSCLAG00000007545	PRDM4	100	84.204	Chinchilla_lanigera
ENSAPLG00000009846	PRDM4	99	86.842	ENSCSAG00000002896	PRDM4	99	87.469	Chlorocebus_sabaeus
ENSAPLG00000009846	PRDM4	71	94.393	ENSCHOG00000001744	PRDM4	85	94.393	Choloepus_hoffmanni
ENSAPLG00000009846	PRDM4	99	91.069	ENSCPBG00000023187	PRDM4	100	91.069	Chrysemys_picta_bellii
ENSAPLG00000009846	PRDM4	99	86.717	ENSCANG00000021804	PRDM4	99	87.343	Colobus_angolensis_palliatus
ENSAPLG00000009846	PRDM4	99	85.287	ENSCGRG00001015102	-	100	85.287	Cricetulus_griseus_chok1gshd
ENSAPLG00000009846	PRDM4	96	84.994	ENSCGRG00000004044	-	100	84.994	Cricetulus_griseus_crigri
ENSAPLG00000009846	PRDM4	99	86.216	ENSDNOG00000032478	PRDM4	99	87.194	Dasypus_novemcinctus
ENSAPLG00000009846	PRDM4	99	72.864	ENSDORG00000015081	-	100	73.116	Dipodomys_ordii
ENSAPLG00000009846	PRDM4	94	46.629	ENSEBUG00000003775	prdm4	99	46.528	Eptatretus_burgeri
ENSAPLG00000009846	PRDM4	99	86.967	ENSECAG00000015423	PRDM4	99	87.469	Equus_caballus
ENSAPLG00000009846	PRDM4	94	83.979	ENSEEUG00000006569	PRDM4	99	83.979	Erinaceus_europaeus
ENSAPLG00000009846	PRDM4	99	60.389	ENSELUG00000015265	prdm4	99	60.875	Esox_lucius
ENSAPLG00000009846	PRDM4	99	87.093	ENSFCAG00000022478	PRDM4	99	87.594	Felis_catus
ENSAPLG00000009846	PRDM4	99	94.598	ENSFALG00000013342	PRDM4	100	94.472	Ficedula_albicollis
ENSAPLG00000009846	PRDM4	99	95.113	ENSGALG00000012619	PRDM4	99	95.113	Gallus_gallus
ENSAPLG00000009846	PRDM4	100	90.113	ENSGAGG00000002763	PRDM4	95	90.113	Gopherus_agassizii
ENSAPLG00000009846	PRDM4	99	86.842	ENSGGOG00000001244	PRDM4	99	87.469	Gorilla_gorilla
ENSAPLG00000009846	PRDM4	99	84.925	ENSHGLG00000004590	PRDM4	98	84.925	Heterocephalus_glaber_female
ENSAPLG00000009846	PRDM4	99	83.955	ENSHGLG00100007464	PRDM4	100	83.955	Heterocephalus_glaber_male
ENSAPLG00000009846	PRDM4	95	62.435	ENSIPUG00000024162	prdm4	94	62.435	Ictalurus_punctatus
ENSAPLG00000009846	PRDM4	100	87.266	ENSSTOG00000016168	PRDM4	99	87.640	Ictidomys_tridecemlineatus
ENSAPLG00000009846	PRDM4	79	87.547	ENSJJAG00000022448	-	94	85.507	Jaculus_jaculus
ENSAPLG00000009846	PRDM4	99	73.391	ENSLACG00000007452	PRDM4	99	73.762	Latimeria_chalumnae
ENSAPLG00000009846	PRDM4	78	42.782	ENSLOCG00000017092	prdm4	100	54.545	Lepisosteus_oculatus
ENSAPLG00000009846	PRDM4	97	86.929	ENSLAFG00000001483	PRDM4	100	87.437	Loxodonta_africana
ENSAPLG00000009846	PRDM4	99	86.842	ENSMFAG00000041862	PRDM4	99	87.469	Macaca_fascicularis
ENSAPLG00000009846	PRDM4	100	86.767	ENSMMUG00000015550	PRDM4	99	87.469	Macaca_mulatta
ENSAPLG00000009846	PRDM4	99	86.842	ENSMNEG00000032319	PRDM4	99	87.469	Macaca_nemestrina
ENSAPLG00000009846	PRDM4	99	86.967	ENSMLEG00000039607	PRDM4	99	87.594	Mandrillus_leucophaeus
ENSAPLG00000009846	PRDM4	99	86.216	ENSMGAG00000012815	PRDM4	100	86.216	Meleagris_gallopavo
ENSAPLG00000009846	PRDM4	99	85.965	ENSMICG00000007807	PRDM4	99	86.466	Microcebus_murinus
ENSAPLG00000009846	PRDM4	100	85.250	ENSMOCG00000000753	Prdm4	99	85.625	Microtus_ochrogaster
ENSAPLG00000009846	PRDM4	99	86.432	ENSMUSG00000035529	Prdm4	100	86.558	Mus_musculus
ENSAPLG00000009846	PRDM4	99	85.696	MGP_PahariEiJ_G0031398	Prdm4	100	86.198	Mus_pahari
ENSAPLG00000009846	PRDM4	99	86.324	MGP_SPRETEiJ_G0016505	Prdm4	100	86.826	Mus_spretus
ENSAPLG00000009846	PRDM4	99	81.297	ENSMPUG00000012238	PRDM4	99	81.352	Mustela_putorius_furo
ENSAPLG00000009846	PRDM4	99	86.717	ENSMLUG00000000767	PRDM4	99	87.218	Myotis_lucifugus
ENSAPLG00000009846	PRDM4	99	85.571	ENSNGAG00000018627	Prdm4	100	86.073	Nannospalax_galili
ENSAPLG00000009846	PRDM4	99	86.717	ENSNLEG00000006748	PRDM4	99	87.343	Nomascus_leucogenys
ENSAPLG00000009846	PRDM4	89	85.915	ENSMEUG00000004495	PRDM4	89	86.385	Notamacropus_eugenii
ENSAPLG00000009846	PRDM4	88	87.202	ENSOPRG00000010192	PRDM4	89	88.095	Ochotona_princeps
ENSAPLG00000009846	PRDM4	99	84.336	ENSODEG00000014750	PRDM4	99	84.837	Octodon_degus
ENSAPLG00000009846	PRDM4	99	87.845	ENSOANG00000005526	PRDM4	99	87.970	Ornithorhynchus_anatinus
ENSAPLG00000009846	PRDM4	94	87.840	ENSOCUG00000012859	PRDM4	96	87.840	Oryctolagus_cuniculus
ENSAPLG00000009846	PRDM4	99	86.575	ENSOGAG00000011945	PRDM4	100	87.077	Otolemur_garnettii
ENSAPLG00000009846	PRDM4	99	87.218	ENSOARG00000017955	PRDM4	99	87.719	Ovis_aries
ENSAPLG00000009846	PRDM4	99	86.967	ENSPPAG00000038438	PRDM4	99	87.594	Pan_paniscus
ENSAPLG00000009846	PRDM4	99	87.093	ENSPPRG00000004144	PRDM4	99	87.594	Panthera_pardus
ENSAPLG00000009846	PRDM4	99	87.093	ENSPTIG00000005847	PRDM4	99	87.594	Panthera_tigris_altaica
ENSAPLG00000009846	PRDM4	99	86.842	ENSPTRG00000005400	PRDM4	99	87.469	Pan_troglodytes
ENSAPLG00000009846	PRDM4	99	86.842	ENSPANG00000022084	PRDM4	99	87.469	Papio_anubis
ENSAPLG00000009846	PRDM4	99	59.572	ENSPKIG00000000875	prdm4	99	59.572	Paramormyrops_kingsleyae
ENSAPLG00000009846	PRDM4	89	91.713	ENSPSIG00000012066	PRDM4	100	91.713	Pelodiscus_sinensis
ENSAPLG00000009846	PRDM4	99	86.324	ENSPEMG00000014598	Prdm4	100	86.575	Peromyscus_maniculatus_bairdii
ENSAPLG00000009846	PRDM4	99	85.144	ENSPCIG00000009471	PRDM4	99	85.393	Phascolarctos_cinereus
ENSAPLG00000009846	PRDM4	99	86.717	ENSPPYG00000004913	PRDM4	99	87.343	Pongo_abelii
ENSAPLG00000009846	PRDM4	83	93.333	ENSPCAG00000009987	PRDM4	83	93.333	Procavia_capensis
ENSAPLG00000009846	PRDM4	99	85.965	ENSPCOG00000021060	PRDM4	99	86.466	Propithecus_coquereli
ENSAPLG00000009846	PRDM4	99	86.233	ENSPVAG00000001596	PRDM4	99	86.859	Pteropus_vampyrus
ENSAPLG00000009846	PRDM4	99	85.714	ENSRNOG00000004962	Prdm4	100	85.840	Rattus_norvegicus
ENSAPLG00000009846	PRDM4	99	86.967	ENSRBIG00000035488	PRDM4	99	87.594	Rhinopithecus_bieti
ENSAPLG00000009846	PRDM4	99	86.842	ENSRROG00000012779	PRDM4	99	87.469	Rhinopithecus_roxellana
ENSAPLG00000009846	PRDM4	99	86.717	ENSSBOG00000000403	PRDM4	99	87.343	Saimiri_boliviensis_boliviensis
ENSAPLG00000009846	PRDM4	99	64.005	ENSSFOG00015023358	prdm4	99	64.128	Scleropages_formosus
ENSAPLG00000009846	PRDM4	99	87.343	ENSSSCG00000000160	PRDM4	99	87.845	Sus_scrofa
ENSAPLG00000009846	PRDM4	99	94.987	ENSTGUG00000010962	-	99	94.862	Taeniopygia_guttata
ENSAPLG00000009846	PRDM4	73	80.375	ENSTBEG00000001732	PRDM4	84	80.375	Tupaia_belangeri
ENSAPLG00000009846	PRDM4	99	86.842	ENSTTRG00000011056	PRDM4	99	87.343	Tursiops_truncatus
ENSAPLG00000009846	PRDM4	99	87.218	ENSUAMG00000022796	PRDM4	99	87.719	Ursus_americanus
ENSAPLG00000009846	PRDM4	99	87.218	ENSUMAG00000017231	PRDM4	99	87.719	Ursus_maritimus
ENSAPLG00000009846	PRDM4	99	87.453	ENSVPAG00000002215	PRDM4	100	87.829	Vicugna_pacos
ENSAPLG00000009846	PRDM4	99	87.594	ENSVVUG00000023397	PRDM4	99	88.095	Vulpes_vulpes