EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000009864 (Gene tree)
Gene ID: -
Gene Symbol: SMARCAL1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a like 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 31733 bases
Position: chrKB742511.1:763126-794858
Accession: 101803813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009596	ResIII	PF04851.15	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000010292	SMARCAL1-201	2916	XM_005010900	ENSAPLP00000009596	972 (aa)	XP_005010957	U3IQS3

Gene Model

Click here to download ENSAPLG00000009864's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009864's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009864	SMARCAL1	100	54.225	ENSG00000138375	SMARCAL1	99	70.000	Homo_sapiens
ENSAPLG00000009864	SMARCAL1	100	52.637	ENSAPOG00000020156	SMARCAL1	100	52.546	Acanthochromis_polyacanthus
ENSAPLG00000009864	SMARCAL1	71	63.649	ENSACIG00000001500	smarcal1	89	63.649	Amphilophus_citrinellus
ENSAPLG00000009864	SMARCAL1	98	54.470	ENSAOCG00000014266	SMARCAL1	96	55.184	Amphiprion_ocellaris
ENSAPLG00000009864	SMARCAL1	78	60.858	ENSATEG00000020624	SMARCAL1	83	59.818	Anabas_testudineus
ENSAPLG00000009864	SMARCAL1	99	59.861	ENSACAG00000004612	SMARCAL1	99	59.861	Anolis_carolinensis
ENSAPLG00000009864	SMARCAL1	75	63.251	ENSACLG00000015990	SMARCAL1	79	63.534	Astatotilapia_calliptera
ENSAPLG00000009864	SMARCAL1	99	53.862	ENSAMXG00000003350	smarcal1	99	52.965	Astyanax_mexicanus
ENSAPLG00000009864	SMARCAL1	99	73.802	ENSCPBG00000013599	SMARCAL1	99	75.621	Chrysemys_picta_bellii
ENSAPLG00000009864	SMARCAL1	68	49.375	ENSCING00000009308	-	99	48.457	Ciona_intestinalis
ENSAPLG00000009864	SMARCAL1	70	63.743	ENSCSEG00000010785	SMARCAL1	76	63.947	Cynoglossus_semilaevis
ENSAPLG00000009864	SMARCAL1	75	61.401	ENSCVAG00000018780	SMARCAL1	77	62.990	Cyprinodon_variegatus
ENSAPLG00000009864	SMARCAL1	56	53.578	ENSEBUG00000011906	SMARCAL1	75	53.578	Eptatretus_burgeri
ENSAPLG00000009864	SMARCAL1	71	63.372	ENSELUG00000010440	-	72	61.473	Esox_lucius
ENSAPLG00000009864	SMARCAL1	99	81.198	ENSFALG00000003981	SMARCAL1	99	81.198	Ficedula_albicollis
ENSAPLG00000009864	SMARCAL1	73	62.235	ENSFHEG00000008380	SMARCAL1	94	53.297	Fundulus_heteroclitus
ENSAPLG00000009864	SMARCAL1	51	63.981	ENSGMOG00000010034	smarcal1	95	63.981	Gadus_morhua
ENSAPLG00000009864	SMARCAL1	99	83.798	ENSGALG00000011475	RPL37A	99	83.695	Gallus_gallus
ENSAPLG00000009864	SMARCAL1	62	67.724	ENSGACG00000006073	SMARCAL1	99	67.724	Gasterosteus_aculeatus
ENSAPLG00000009864	SMARCAL1	93	68.030	ENSGAGG00000015660	SMARCAL1	99	68.030	Gopherus_agassizii
ENSAPLG00000009864	SMARCAL1	76	62.350	ENSHBUG00000002973	smarcal1	79	63.534	Haplochromis_burtoni
ENSAPLG00000009864	SMARCAL1	76	60.162	ENSHCOG00000017921	smarcal1	87	60.544	Hippocampus_comes
ENSAPLG00000009864	SMARCAL1	71	62.302	ENSKMAG00000012023	SMARCAL1	82	60.809	Kryptolebias_marmoratus
ENSAPLG00000009864	SMARCAL1	91	52.849	ENSLBEG00000003493	smarcal1	99	53.289	Labrus_bergylta
ENSAPLG00000009864	SMARCAL1	71	61.190	ENSLBEG00000022915	smarcal1	92	61.135	Labrus_bergylta
ENSAPLG00000009864	SMARCAL1	99	54.852	ENSLACG00000010974	SMARCAL1	99	54.852	Latimeria_chalumnae
ENSAPLG00000009864	SMARCAL1	72	68.750	ENSLOCG00000009637	smarcal1	84	68.750	Lepisosteus_oculatus
ENSAPLG00000009864	SMARCAL1	96	54.286	ENSMAMG00000000828	SMARCAL1	96	54.467	Mastacembelus_armatus
ENSAPLG00000009864	SMARCAL1	75	63.115	ENSMZEG00005007660	SMARCAL1	79	63.394	Maylandia_zebra
ENSAPLG00000009864	SMARCAL1	99	82.025	ENSMGAG00000011658	SMARCAL1	99	81.921	Meleagris_gallopavo
ENSAPLG00000009864	SMARCAL1	72	59.972	ENSMMOG00000003842	smarcal1	86	59.972	Mola_mola
ENSAPLG00000009864	SMARCAL1	99	54.950	ENSMODG00000015544	SMARCAL1	99	54.059	Monodelphis_domestica
ENSAPLG00000009864	SMARCAL1	71	63.545	ENSNBRG00000016273	smarcal1	89	63.545	Neolamprologus_brichardi
ENSAPLG00000009864	SMARCAL1	93	56.893	ENSMEUG00000004395	SMARCAL1	99	56.893	Notamacropus_eugenii
ENSAPLG00000009864	SMARCAL1	75	63.388	ENSONIG00000009036	smarcal1	97	65.569	Oreochromis_niloticus
ENSAPLG00000009864	SMARCAL1	74	61.591	ENSORLG00000016455	SMARCAL1	79	61.711	Oryzias_latipes
ENSAPLG00000009864	SMARCAL1	84	54.608	ENSORLG00020001610	SMARCAL1	94	54.577	Oryzias_latipes_hni
ENSAPLG00000009864	SMARCAL1	74	61.591	ENSORLG00015001865	SMARCAL1	79	61.711	Oryzias_latipes_hsok
ENSAPLG00000009864	SMARCAL1	74	60.274	ENSOMEG00000001845	smarcal1	82	60.644	Oryzias_melastigma
ENSAPLG00000009864	SMARCAL1	72	61.582	ENSPMGG00000019092	SMARCAL1	78	61.705	Periophthalmus_magnuspinnatus
ENSAPLG00000009864	SMARCAL1	99	54.500	ENSPCIG00000022514	SMARCAL1	99	55.459	Phascolarctos_cinereus
ENSAPLG00000009864	SMARCAL1	84	63.848	ENSPFOG00000000560	SMARCAL1	94	52.473	Poecilia_formosa
ENSAPLG00000009864	SMARCAL1	96	63.994	ENSPMEG00000018146	SMARCAL1	94	52.581	Poecilia_mexicana
ENSAPLG00000009864	SMARCAL1	83	63.745	ENSPNAG00000014900	smarcal1	86	63.347	Pygocentrus_nattereri
ENSAPLG00000009864	SMARCAL1	99	51.789	ENSSHAG00000013538	SMARCAL1	100	51.351	Sarcophilus_harrisii
ENSAPLG00000009864	SMARCAL1	99	51.151	ENSSMAG00000010427	SMARCAL1	77	61.818	Scophthalmus_maximus
ENSAPLG00000009864	SMARCAL1	75	62.689	ENSSDUG00000017470	SMARCAL1	76	63.128	Seriola_dumerili
ENSAPLG00000009864	SMARCAL1	77	61.436	ENSSLDG00000007224	SMARCAL1	99	51.109	Seriola_lalandi_dorsalis
ENSAPLG00000009864	SMARCAL1	100	63.908	ENSSPUG00000015369	SMARCAL1	99	63.908	Sphenodon_punctatus
ENSAPLG00000009864	SMARCAL1	69	64.487	ENSSPAG00000003742	smarcal1	85	64.487	Stegastes_partitus
ENSAPLG00000009864	SMARCAL1	71	62.899	ENSSSCG00000035501	SMARCAL1	74	63.704	Sus_scrofa
ENSAPLG00000009864	SMARCAL1	71	83.138	ENSTGUG00000005079	SMARCAL1	98	83.383	Taeniopygia_guttata
ENSAPLG00000009864	SMARCAL1	75	56.393	ENSTRUG00000010701	SMARCAL1	81	56.745	Takifugu_rubripes
ENSAPLG00000009864	SMARCAL1	100	47.141	ENSTTRG00000009001	SMARCAL1	99	46.941	Tursiops_truncatus
ENSAPLG00000009864	SMARCAL1	99	59.553	ENSXETG00000000465	smarcal1	99	59.063	Xenopus_tropicalis