EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000009978 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 29119 bases
Position: chrKB743009.1:245609-274727
Accession: 101793768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009713	Ago_hook	PF10427.9	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000010410	TNRC6A-201	5646	XM_005018592	ENSAPLP00000009713	1881 (aa)	XP_005018649	U3IR40

Gene Model

Click here to download ENSAPLG00000009978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000009978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000009978	TNRC6A	99	34.981	ENSAPLG00000009347	TNRC6B	99	39.037
ENSAPLG00000009978	TNRC6A	99	45.491	ENSAPLG00000005456	TNRC6C	99	46.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000009978	TNRC6A	100	81.927	ENSG00000090905	TNRC6A	100	92.547	Homo_sapiens
ENSAPLG00000009978	TNRC6A	100	82.065	ENSAMEG00000009333	TNRC6A	99	82.065	Ailuropoda_melanoleuca
ENSAPLG00000009978	TNRC6A	98	58.588	ENSACAG00000011857	TNRC6A	97	59.373	Anolis_carolinensis
ENSAPLG00000009978	TNRC6A	100	81.619	ENSANAG00000025252	TNRC6A	98	81.623	Aotus_nancymaae
ENSAPLG00000009978	TNRC6A	94	57.883	ENSAMXG00000019919	tnrc6a	100	56.380	Astyanax_mexicanus
ENSAPLG00000009978	TNRC6A	100	81.894	ENSBTAG00000017999	TNRC6A	99	81.633	Bos_taurus
ENSAPLG00000009978	TNRC6A	100	81.205	ENSCJAG00000020677	TNRC6A	97	81.205	Callithrix_jacchus
ENSAPLG00000009978	TNRC6A	100	82.368	ENSCAFG00000017531	TNRC6A	97	82.368	Canis_familiaris
ENSAPLG00000009978	TNRC6A	100	81.273	ENSCAFG00020021160	TNRC6A	99	81.221	Canis_lupus_dingo
ENSAPLG00000009978	TNRC6A	100	79.278	ENSCHIG00000019448	TNRC6A	99	79.278	Capra_hircus
ENSAPLG00000009978	TNRC6A	100	81.837	ENSTSYG00000012711	TNRC6A	99	81.837	Carlito_syrichta
ENSAPLG00000009978	TNRC6A	100	79.328	ENSCPOG00000036684	TNRC6A	97	79.696	Cavia_porcellus
ENSAPLG00000009978	TNRC6A	100	81.794	ENSCCAG00000033664	TNRC6A	99	81.742	Cebus_capucinus
ENSAPLG00000009978	TNRC6A	100	80.765	ENSCATG00000019284	TNRC6A	97	80.765	Cercocebus_atys
ENSAPLG00000009978	TNRC6A	100	76.253	ENSCLAG00000010217	TNRC6A	97	76.305	Chinchilla_lanigera
ENSAPLG00000009978	TNRC6A	100	81.908	ENSCSAG00000006561	TNRC6A	97	81.908	Chlorocebus_sabaeus
ENSAPLG00000009978	TNRC6A	95	80.149	ENSCHOG00000009374	TNRC6A	92	80.149	Choloepus_hoffmanni
ENSAPLG00000009978	TNRC6A	94	90.873	ENSCPBG00000001881	TNRC6A	99	90.592	Chrysemys_picta_bellii
ENSAPLG00000009978	TNRC6A	100	82.046	ENSCANG00000041549	TNRC6A	97	82.046	Colobus_angolensis_palliatus
ENSAPLG00000009978	TNRC6A	100	80.743	ENSCGRG00001015021	Tnrc6a	99	80.952	Cricetulus_griseus_chok1gshd
ENSAPLG00000009978	TNRC6A	100	77.627	ENSCGRG00000013351	Tnrc6a	97	77.888	Cricetulus_griseus_crigri
ENSAPLG00000009978	TNRC6A	94	59.304	ENSDARG00000079688	tnrc6a	99	59.302	Danio_rerio
ENSAPLG00000009978	TNRC6A	100	81.651	ENSDNOG00000013989	TNRC6A	99	81.651	Dasypus_novemcinctus
ENSAPLG00000009978	TNRC6A	100	73.756	ENSETEG00000014658	TNRC6A	99	74.175	Echinops_telfairi
ENSAPLG00000009978	TNRC6A	100	81.832	ENSEASG00005017693	TNRC6A	99	82.251	Equus_asinus_asinus
ENSAPLG00000009978	TNRC6A	100	81.937	ENSECAG00000025056	TNRC6A	99	82.251	Equus_caballus
ENSAPLG00000009978	TNRC6A	100	76.106	ENSEEUG00000004530	TNRC6A	99	76.106	Erinaceus_europaeus
ENSAPLG00000009978	TNRC6A	100	81.809	ENSFCAG00000025236	TNRC6A	99	81.861	Felis_catus
ENSAPLG00000009978	TNRC6A	100	92.884	ENSFALG00000003757	TNRC6A	97	92.989	Ficedula_albicollis
ENSAPLG00000009978	TNRC6A	94	93.806	ENSGALG00000006068	TNRC6A	99	93.694	Gallus_gallus
ENSAPLG00000009978	TNRC6A	94	90.107	ENSGAGG00000023209	TNRC6A	99	89.826	Gopherus_agassizii
ENSAPLG00000009978	TNRC6A	100	81.823	ENSGGOG00000005137	TNRC6A	99	81.823	Gorilla_gorilla
ENSAPLG00000009978	TNRC6A	98	62.581	ENSHGLG00000007368	-	93	62.480	Heterocephalus_glaber_female
ENSAPLG00000009978	TNRC6A	99	77.859	ENSHGLG00000012474	-	97	77.964	Heterocephalus_glaber_female
ENSAPLG00000009978	TNRC6A	99	78.685	ENSHGLG00100012496	-	97	78.685	Heterocephalus_glaber_male
ENSAPLG00000009978	TNRC6A	100	81.487	ENSSTOG00000023394	TNRC6A	96	81.487	Ictidomys_tridecemlineatus
ENSAPLG00000009978	TNRC6A	100	75.223	ENSLACG00000006277	TNRC6A	100	75.537	Latimeria_chalumnae
ENSAPLG00000009978	TNRC6A	100	85.022	ENSLOCG00000005517	tnrc6a	90	85.022	Lepisosteus_oculatus
ENSAPLG00000009978	TNRC6A	100	79.276	ENSLAFG00000004209	TNRC6A	99	79.853	Loxodonta_africana
ENSAPLG00000009978	TNRC6A	100	80.714	ENSMFAG00000003824	TNRC6A	99	80.765	Macaca_fascicularis
ENSAPLG00000009978	TNRC6A	100	82.046	ENSMMUG00000020428	TNRC6A	97	82.046	Macaca_mulatta
ENSAPLG00000009978	TNRC6A	100	81.672	ENSMNEG00000034854	TNRC6A	99	80.755	Macaca_nemestrina
ENSAPLG00000009978	TNRC6A	100	80.505	ENSMLEG00000042737	TNRC6A	97	80.505	Mandrillus_leucophaeus
ENSAPLG00000009978	TNRC6A	98	97.029	ENSMGAG00000006455	TNRC6A	94	97.029	Meleagris_gallopavo
ENSAPLG00000009978	TNRC6A	100	78.500	ENSMAUG00000012750	Tnrc6a	97	78.762	Mesocricetus_auratus
ENSAPLG00000009978	TNRC6A	100	82.135	ENSMICG00000030685	TNRC6A	98	82.083	Microcebus_murinus
ENSAPLG00000009978	TNRC6A	100	78.845	ENSMOCG00000000152	Tnrc6a	97	78.740	Microtus_ochrogaster
ENSAPLG00000009978	TNRC6A	100	85.226	ENSMODG00000016348	TNRC6A	96	85.322	Monodelphis_domestica
ENSAPLG00000009978	TNRC6A	100	78.327	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	83.227	Mus_caroli
ENSAPLG00000009978	TNRC6A	100	78.478	ENSMUSG00000052707	Tnrc6a	99	83.511	Mus_musculus
ENSAPLG00000009978	TNRC6A	100	78.332	MGP_PahariEiJ_G0013635	Tnrc6a	100	83.440	Mus_pahari
ENSAPLG00000009978	TNRC6A	100	80.767	MGP_SPRETEiJ_G0031539	Tnrc6a	100	83.227	Mus_spretus
ENSAPLG00000009978	TNRC6A	100	71.926	ENSMPUG00000012324	TNRC6A	100	71.926	Mustela_putorius_furo
ENSAPLG00000009978	TNRC6A	100	80.346	ENSMLUG00000002701	TNRC6A	100	80.294	Myotis_lucifugus
ENSAPLG00000009978	TNRC6A	100	79.319	ENSNGAG00000020702	Tnrc6a	97	79.372	Nannospalax_galili
ENSAPLG00000009978	TNRC6A	100	79.657	ENSNLEG00000011851	TNRC6A	98	79.605	Nomascus_leucogenys
ENSAPLG00000009978	TNRC6A	77	89.073	ENSMEUG00000015959	-	74	89.333	Notamacropus_eugenii
ENSAPLG00000009978	TNRC6A	95	93.284	ENSOPRG00000005819	TNRC6A	93	93.284	Ochotona_princeps
ENSAPLG00000009978	TNRC6A	99	75.737	ENSODEG00000012802	TNRC6A	97	76.263	Octodon_degus
ENSAPLG00000009978	TNRC6A	91	86.798	ENSOANG00000007672	TNRC6A	100	86.798	Ornithorhynchus_anatinus
ENSAPLG00000009978	TNRC6A	100	81.270	ENSOCUG00000004325	TNRC6A	100	81.270	Oryctolagus_cuniculus
ENSAPLG00000009978	TNRC6A	100	82.584	ENSOGAG00000006666	TNRC6A	98	82.584	Otolemur_garnettii
ENSAPLG00000009978	TNRC6A	100	81.305	ENSOARG00000017950	TNRC6A	99	80.843	Ovis_aries
ENSAPLG00000009978	TNRC6A	100	81.662	ENSPPAG00000028379	TNRC6A	99	81.662	Pan_paniscus
ENSAPLG00000009978	TNRC6A	100	81.861	ENSPPRG00000005861	TNRC6A	97	81.913	Panthera_pardus
ENSAPLG00000009978	TNRC6A	100	81.312	ENSPTIG00000006346	TNRC6A	97	81.312	Panthera_tigris_altaica
ENSAPLG00000009978	TNRC6A	100	81.672	ENSPTRG00000007898	TNRC6A	99	81.672	Pan_troglodytes
ENSAPLG00000009978	TNRC6A	100	79.355	ENSPANG00000018523	TNRC6A	99	78.653	Papio_anubis
ENSAPLG00000009978	TNRC6A	91	78.325	ENSPKIG00000012859	tnrc6a	96	79.891	Paramormyrops_kingsleyae
ENSAPLG00000009978	TNRC6A	81	84.348	ENSPSIG00000003965	TNRC6A	100	83.913	Pelodiscus_sinensis
ENSAPLG00000009978	TNRC6A	100	78.699	ENSPEMG00000016318	Tnrc6a	97	78.594	Peromyscus_maniculatus_bairdii
ENSAPLG00000009978	TNRC6A	100	87.122	ENSPCIG00000012106	TNRC6A	99	87.228	Phascolarctos_cinereus
ENSAPLG00000009978	TNRC6A	100	81.478	ENSPPYG00000007202	TNRC6A	97	81.478	Pongo_abelii
ENSAPLG00000009978	TNRC6A	95	87.629	ENSPCAG00000008260	TNRC6A	91	87.629	Procavia_capensis
ENSAPLG00000009978	TNRC6A	100	79.937	ENSPCOG00000010134	TNRC6A	97	79.937	Propithecus_coquereli
ENSAPLG00000009978	TNRC6A	89	62.965	ENSPVAG00000012066	TNRC6A	97	63.357	Pteropus_vampyrus
ENSAPLG00000009978	TNRC6A	99	80.230	ENSRNOG00000024737	Tnrc6a	97	80.073	Rattus_norvegicus
ENSAPLG00000009978	TNRC6A	100	81.942	ENSRBIG00000014222	TNRC6A	99	81.942	Rhinopithecus_bieti
ENSAPLG00000009978	TNRC6A	100	82.165	ENSRROG00000032360	TNRC6A	97	82.165	Rhinopithecus_roxellana
ENSAPLG00000009978	TNRC6A	100	82.427	ENSSBOG00000036197	TNRC6A	100	83.828	Saimiri_boliviensis_boliviensis
ENSAPLG00000009978	TNRC6A	94	84.193	ENSSHAG00000008811	TNRC6A	99	84.415	Sarcophilus_harrisii
ENSAPLG00000009978	TNRC6A	94	60.422	ENSSFOG00015008920	tnrc6a	100	62.809	Scleropages_formosus
ENSAPLG00000009978	TNRC6A	73	71.480	ENSSARG00000002479	TNRC6A	88	72.110	Sorex_araneus
ENSAPLG00000009978	TNRC6A	94	86.203	ENSSPUG00000010525	TNRC6A	100	85.867	Sphenodon_punctatus
ENSAPLG00000009978	TNRC6A	100	79.615	ENSSSCG00000038870	TNRC6A	100	84.642	Sus_scrofa
ENSAPLG00000009978	TNRC6A	100	90.967	ENSTGUG00000006142	TNRC6A	97	91.020	Taeniopygia_guttata
ENSAPLG00000009978	TNRC6A	100	79.729	ENSTBEG00000014965	TNRC6A	99	79.729	Tupaia_belangeri
ENSAPLG00000009978	TNRC6A	94	87.634	ENSTTRG00000002008	TNRC6A	90	87.634	Tursiops_truncatus
ENSAPLG00000009978	TNRC6A	81	76.963	ENSUAMG00000006656	-	93	77.027	Ursus_americanus
ENSAPLG00000009978	TNRC6A	100	82.267	ENSUMAG00000008274	TNRC6A	100	83.012	Ursus_maritimus
ENSAPLG00000009978	TNRC6A	56	75.938	ENSVPAG00000010764	-	54	76.111	Vicugna_pacos
ENSAPLG00000009978	TNRC6A	95	92.973	ENSVVUG00000005380	TNRC6A	99	82.212	Vulpes_vulpes
ENSAPLG00000009978	TNRC6A	98	70.016	ENSXETG00000030437	TNRC6A	99	69.930	Xenopus_tropicalis