EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000010125 (Gene tree)
Gene ID: -
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 30179 bases
Position: chrKB742730.1:657916-688094
Accession: 101805378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000009903	SRP54	PF00448.22	1.6e-77	1	1
ENSAPLP00000009903	SRP54_N	PF02881.19	9.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000010605	SRP54-201	2334	XM_005014646	ENSAPLP00000009903	500 (aa)	XP_005014703	U3IRN0

Gene Model

Click here to download ENSAPLG00000010125's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000010125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000010125	SRP54	95	98.734	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSAPLG00000010125	SRP54	95	95.148	ENSAPOG00000011314	srp54	94	95.148	Acanthochromis_polyacanthus
ENSAPLG00000010125	SRP54	95	98.734	ENSAMEG00000015544	SRP54	94	98.734	Ailuropoda_melanoleuca
ENSAPLG00000010125	SRP54	90	93.987	ENSACIG00000022831	srp54	97	93.987	Amphilophus_citrinellus
ENSAPLG00000010125	SRP54	95	95.148	ENSAOCG00000019401	srp54	94	95.148	Amphiprion_ocellaris
ENSAPLG00000010125	SRP54	95	95.148	ENSAPEG00000001977	srp54	94	95.148	Amphiprion_percula
ENSAPLG00000010125	SRP54	95	95.570	ENSATEG00000013877	srp54	94	95.570	Anabas_testudineus
ENSAPLG00000010125	SRP54	81	95.792	ENSACAG00000010631	-	93	95.792	Anolis_carolinensis
ENSAPLG00000010125	SRP54	95	98.945	ENSACAG00000002103	-	94	98.945	Anolis_carolinensis
ENSAPLG00000010125	SRP54	59	82.609	ENSACAG00000001124	-	90	82.609	Anolis_carolinensis
ENSAPLG00000010125	SRP54	100	98.800	ENSANAG00000022133	SRP54	97	98.800	Aotus_nancymaae
ENSAPLG00000010125	SRP54	95	95.359	ENSACLG00000015866	srp54	94	95.359	Astatotilapia_calliptera
ENSAPLG00000010125	SRP54	95	95.359	ENSAMXG00000032669	SRP54	94	95.359	Astyanax_mexicanus
ENSAPLG00000010125	SRP54	95	98.734	ENSBTAG00000019085	SRP54	94	98.734	Bos_taurus
ENSAPLG00000010125	SRP54	95	71.908	WBGene00009012	F21D5.7	96	71.908	Caenorhabditis_elegans
ENSAPLG00000010125	SRP54	100	98.800	ENSCJAG00000006581	SRP54	97	98.800	Callithrix_jacchus
ENSAPLG00000010125	SRP54	95	98.734	ENSCAFG00000013331	SRP54	94	98.734	Canis_familiaris
ENSAPLG00000010125	SRP54	95	98.734	ENSCAFG00020023427	SRP54	94	98.734	Canis_lupus_dingo
ENSAPLG00000010125	SRP54	95	98.734	ENSCHIG00000026345	SRP54	94	98.734	Capra_hircus
ENSAPLG00000010125	SRP54	99	85.455	ENSTSYG00000035333	-	97	85.455	Carlito_syrichta
ENSAPLG00000010125	SRP54	100	98.800	ENSTSYG00000002680	-	97	98.800	Carlito_syrichta
ENSAPLG00000010125	SRP54	95	63.469	ENSCAPG00000008780	SRP54	100	63.469	Cavia_aperea
ENSAPLG00000010125	SRP54	95	98.312	ENSCPOG00000003691	SRP54	94	98.312	Cavia_porcellus
ENSAPLG00000010125	SRP54	85	98.205	ENSCCAG00000024179	SRP54	93	98.458	Cebus_capucinus
ENSAPLG00000010125	SRP54	100	98.800	ENSCATG00000034083	SRP54	95	98.800	Cercocebus_atys
ENSAPLG00000010125	SRP54	95	98.734	ENSCLAG00000015076	SRP54	94	98.734	Chinchilla_lanigera
ENSAPLG00000010125	SRP54	95	98.734	ENSCSAG00000015575	SRP54	94	98.734	Chlorocebus_sabaeus
ENSAPLG00000010125	SRP54	95	86.498	ENSCHOG00000008986	SRP54	99	86.498	Choloepus_hoffmanni
ENSAPLG00000010125	SRP54	95	99.578	ENSCPBG00000026195	SRP54	94	99.578	Chrysemys_picta_bellii
ENSAPLG00000010125	SRP54	95	82.700	ENSCING00000007380	-	94	82.700	Ciona_intestinalis
ENSAPLG00000010125	SRP54	100	98.800	ENSCANG00000028532	SRP54	97	98.800	Colobus_angolensis_palliatus
ENSAPLG00000010125	SRP54	95	98.312	ENSCGRG00001009525	-	94	98.312	Cricetulus_griseus_chok1gshd
ENSAPLG00000010125	SRP54	77	98.701	ENSCGRG00000009453	-	89	98.701	Cricetulus_griseus_crigri
ENSAPLG00000010125	SRP54	95	94.515	ENSCSEG00000012392	srp54	94	94.515	Cynoglossus_semilaevis
ENSAPLG00000010125	SRP54	95	95.148	ENSCVAG00000010395	srp54	94	95.148	Cyprinodon_variegatus
ENSAPLG00000010125	SRP54	95	95.359	ENSDARG00000098367	srp54	94	95.359	Danio_rerio
ENSAPLG00000010125	SRP54	95	98.734	ENSDNOG00000032525	SRP54	94	98.734	Dasypus_novemcinctus
ENSAPLG00000010125	SRP54	90	84.513	ENSDORG00000005159	-	98	84.513	Dipodomys_ordii
ENSAPLG00000010125	SRP54	95	77.637	FBgn0010747	Srp54k	93	77.637	Drosophila_melanogaster
ENSAPLG00000010125	SRP54	78	56.298	ENSETEG00000012102	-	93	56.298	Echinops_telfairi
ENSAPLG00000010125	SRP54	95	97.468	ENSETEG00000016307	-	94	97.468	Echinops_telfairi
ENSAPLG00000010125	SRP54	95	88.819	ENSEBUG00000009437	-	94	88.819	Eptatretus_burgeri
ENSAPLG00000010125	SRP54	95	98.734	ENSEASG00005002057	SRP54	94	98.734	Equus_asinus_asinus
ENSAPLG00000010125	SRP54	95	98.734	ENSECAG00000018042	SRP54	93	98.734	Equus_caballus
ENSAPLG00000010125	SRP54	95	81.435	ENSEEUG00000001511	SRP54	94	81.435	Erinaceus_europaeus
ENSAPLG00000010125	SRP54	95	94.515	ENSELUG00000003395	srp54	94	94.515	Esox_lucius
ENSAPLG00000010125	SRP54	95	98.523	ENSFCAG00000032033	SRP54	94	98.523	Felis_catus
ENSAPLG00000010125	SRP54	95	100.000	ENSFALG00000005995	SRP54	94	100.000	Ficedula_albicollis
ENSAPLG00000010125	SRP54	95	98.734	ENSFDAG00000016767	SRP54	95	98.734	Fukomys_damarensis
ENSAPLG00000010125	SRP54	95	94.726	ENSFHEG00000004263	srp54	94	94.726	Fundulus_heteroclitus
ENSAPLG00000010125	SRP54	90	89.062	ENSGMOG00000011391	srp54	94	89.062	Gadus_morhua
ENSAPLG00000010125	SRP54	95	100.000	ENSGALG00000023135	SRP54	94	100.000	Gallus_gallus
ENSAPLG00000010125	SRP54	95	95.359	ENSGAFG00000011586	srp54	94	95.359	Gambusia_affinis
ENSAPLG00000010125	SRP54	95	94.726	ENSGACG00000004181	srp54	100	94.470	Gasterosteus_aculeatus
ENSAPLG00000010125	SRP54	95	99.578	ENSGAGG00000014766	SRP54	94	99.578	Gopherus_agassizii
ENSAPLG00000010125	SRP54	95	98.734	ENSGGOG00000002926	SRP54	94	98.734	Gorilla_gorilla
ENSAPLG00000010125	SRP54	95	95.359	ENSHBUG00000005678	srp54	94	95.359	Haplochromis_burtoni
ENSAPLG00000010125	SRP54	95	98.734	ENSHGLG00000002850	SRP54	94	98.734	Heterocephalus_glaber_female
ENSAPLG00000010125	SRP54	95	66.105	ENSHGLG00100007281	-	93	66.105	Heterocephalus_glaber_male
ENSAPLG00000010125	SRP54	95	98.734	ENSHGLG00100005263	SRP54	94	98.734	Heterocephalus_glaber_male
ENSAPLG00000010125	SRP54	95	93.460	ENSHCOG00000021127	srp54	94	93.460	Hippocampus_comes
ENSAPLG00000010125	SRP54	95	94.937	ENSIPUG00000001420	srp54	94	94.937	Ictalurus_punctatus
ENSAPLG00000010125	SRP54	95	98.734	ENSSTOG00000016023	SRP54	94	98.734	Ictidomys_tridecemlineatus
ENSAPLG00000010125	SRP54	95	93.249	ENSJJAG00000013417	-	94	93.249	Jaculus_jaculus
ENSAPLG00000010125	SRP54	82	74.390	ENSJJAG00000016404	-	92	74.390	Jaculus_jaculus
ENSAPLG00000010125	SRP54	95	94.726	ENSKMAG00000007707	srp54	94	94.726	Kryptolebias_marmoratus
ENSAPLG00000010125	SRP54	95	95.148	ENSLBEG00000018690	srp54	94	95.148	Labrus_bergylta
ENSAPLG00000010125	SRP54	95	95.148	ENSLBEG00000021122	srp54	94	95.148	Labrus_bergylta
ENSAPLG00000010125	SRP54	95	95.992	ENSLACG00000017890	SRP54	94	95.992	Latimeria_chalumnae
ENSAPLG00000010125	SRP54	95	96.203	ENSLOCG00000009440	srp54	94	96.203	Lepisosteus_oculatus
ENSAPLG00000010125	SRP54	95	98.734	ENSLAFG00000012007	SRP54	94	98.734	Loxodonta_africana
ENSAPLG00000010125	SRP54	100	98.800	ENSMFAG00000044371	SRP54	95	98.800	Macaca_fascicularis
ENSAPLG00000010125	SRP54	100	98.800	ENSMMUG00000015073	FAM177A1	95	98.800	Macaca_mulatta
ENSAPLG00000010125	SRP54	100	98.800	ENSMNEG00000006947	SRP54	95	98.800	Macaca_nemestrina
ENSAPLG00000010125	SRP54	100	98.800	ENSMLEG00000042251	SRP54	95	98.800	Mandrillus_leucophaeus
ENSAPLG00000010125	SRP54	95	95.359	ENSMAMG00000004803	srp54	94	95.359	Mastacembelus_armatus
ENSAPLG00000010125	SRP54	95	95.359	ENSMZEG00005027528	srp54	94	95.359	Maylandia_zebra
ENSAPLG00000010125	SRP54	95	94.958	ENSMGAG00000012481	SRP54	94	94.958	Meleagris_gallopavo
ENSAPLG00000010125	SRP54	95	98.523	ENSMAUG00000014447	-	94	98.523	Mesocricetus_auratus
ENSAPLG00000010125	SRP54	100	98.800	ENSMICG00000010270	SRP54	97	98.800	Microcebus_murinus
ENSAPLG00000010125	SRP54	82	98.293	ENSMOCG00000000948	-	93	98.293	Microtus_ochrogaster
ENSAPLG00000010125	SRP54	91	92.511	ENSMMOG00000020303	srp54	99	92.511	Mola_mola
ENSAPLG00000010125	SRP54	95	98.523	ENSMODG00000012925	-	94	98.523	Monodelphis_domestica
ENSAPLG00000010125	SRP54	95	98.523	ENSMODG00000023150	-	94	98.523	Monodelphis_domestica
ENSAPLG00000010125	SRP54	89	94.808	ENSMALG00000009163	srp54	98	94.808	Monopterus_albus
ENSAPLG00000010125	SRP54	95	98.523	MGP_CAROLIEiJ_G0017754	-	94	98.523	Mus_caroli
ENSAPLG00000010125	SRP54	95	98.523	ENSMUSG00000112449	Srp54b	94	98.523	Mus_musculus
ENSAPLG00000010125	SRP54	95	97.679	ENSMUSG00000079108	Srp54c	94	97.679	Mus_musculus
ENSAPLG00000010125	SRP54	95	98.523	ENSMUSG00000073079	Srp54a	100	99.091	Mus_musculus
ENSAPLG00000010125	SRP54	95	98.523	MGP_PahariEiJ_G0029510	-	94	98.523	Mus_pahari
ENSAPLG00000010125	SRP54	95	98.734	ENSMPUG00000016302	SRP54	94	98.734	Mustela_putorius_furo
ENSAPLG00000010125	SRP54	95	98.101	ENSMLUG00000008958	SRP54	94	98.101	Myotis_lucifugus
ENSAPLG00000010125	SRP54	95	87.975	ENSNGAG00000019806	-	93	87.975	Nannospalax_galili
ENSAPLG00000010125	SRP54	82	94.878	ENSNBRG00000006000	srp54	93	94.878	Neolamprologus_brichardi
ENSAPLG00000010125	SRP54	100	98.800	ENSNLEG00000003496	SRP54	97	98.800	Nomascus_leucogenys
ENSAPLG00000010125	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSAPLG00000010125	SRP54	52	100.000	ENSOPRG00000014502	-	54	100.000	Ochotona_princeps
ENSAPLG00000010125	SRP54	95	98.734	ENSODEG00000004865	SRP54	94	98.734	Octodon_degus
ENSAPLG00000010125	SRP54	95	95.359	ENSONIG00000011768	srp54	94	95.359	Oreochromis_niloticus
ENSAPLG00000010125	SRP54	95	98.734	ENSOANG00000014051	SRP54	94	98.734	Ornithorhynchus_anatinus
ENSAPLG00000010125	SRP54	95	98.312	ENSOCUG00000007838	SRP54	94	98.312	Oryctolagus_cuniculus
ENSAPLG00000010125	SRP54	95	95.148	ENSORLG00000010027	srp54	94	95.148	Oryzias_latipes
ENSAPLG00000010125	SRP54	95	95.148	ENSORLG00020001878	srp54	94	95.148	Oryzias_latipes_hni
ENSAPLG00000010125	SRP54	95	95.148	ENSORLG00015021866	srp54	94	95.148	Oryzias_latipes_hsok
ENSAPLG00000010125	SRP54	95	94.937	ENSOMEG00000020952	srp54	94	94.937	Oryzias_melastigma
ENSAPLG00000010125	SRP54	95	98.734	ENSOGAG00000012188	SRP54	94	98.734	Otolemur_garnettii
ENSAPLG00000010125	SRP54	95	98.734	ENSOARG00000007160	SRP54	94	98.734	Ovis_aries
ENSAPLG00000010125	SRP54	95	98.734	ENSPPAG00000017434	SRP54	94	98.734	Pan_paniscus
ENSAPLG00000010125	SRP54	95	97.468	ENSPPRG00000014047	SRP54	94	97.468	Panthera_pardus
ENSAPLG00000010125	SRP54	95	98.523	ENSPTIG00000000744	SRP54	90	98.523	Panthera_tigris_altaica
ENSAPLG00000010125	SRP54	95	98.734	ENSPTRG00000006259	FAM177A1	94	98.734	Pan_troglodytes
ENSAPLG00000010125	SRP54	100	98.800	ENSPANG00000023853	SRP54	95	98.800	Papio_anubis
ENSAPLG00000010125	SRP54	95	94.937	ENSPKIG00000001953	srp54	94	94.937	Paramormyrops_kingsleyae
ENSAPLG00000010125	SRP54	95	99.367	ENSPSIG00000006476	SRP54	94	99.367	Pelodiscus_sinensis
ENSAPLG00000010125	SRP54	92	92.174	ENSPMGG00000004127	srp54	99	92.174	Periophthalmus_magnuspinnatus
ENSAPLG00000010125	SRP54	95	85.654	ENSPEMG00000019634	-	94	85.654	Peromyscus_maniculatus_bairdii
ENSAPLG00000010125	SRP54	95	90.295	ENSPMAG00000006078	-	94	90.295	Petromyzon_marinus
ENSAPLG00000010125	SRP54	95	98.523	ENSPCIG00000016175	SRP54	94	98.523	Phascolarctos_cinereus
ENSAPLG00000010125	SRP54	95	95.359	ENSPFOG00000008870	srp54	94	95.359	Poecilia_formosa
ENSAPLG00000010125	SRP54	95	95.359	ENSPLAG00000009889	srp54	94	95.359	Poecilia_latipinna
ENSAPLG00000010125	SRP54	95	95.359	ENSPMEG00000008601	srp54	94	95.359	Poecilia_mexicana
ENSAPLG00000010125	SRP54	95	95.359	ENSPREG00000004505	srp54	94	95.359	Poecilia_reticulata
ENSAPLG00000010125	SRP54	95	93.249	ENSPPYG00000005739	SRP54	94	93.249	Pongo_abelii
ENSAPLG00000010125	SRP54	95	94.304	ENSPCAG00000006268	SRP54	94	94.304	Procavia_capensis
ENSAPLG00000010125	SRP54	100	96.806	ENSPCOG00000022473	SRP54	97	96.806	Propithecus_coquereli
ENSAPLG00000010125	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSAPLG00000010125	SRP54	95	95.359	ENSPNYG00000009717	srp54	94	95.359	Pundamilia_nyererei
ENSAPLG00000010125	SRP54	95	95.570	ENSPNAG00000008544	srp54	94	95.570	Pygocentrus_nattereri
ENSAPLG00000010125	SRP54	95	98.734	ENSRNOG00000032776	Srp54a	94	98.734	Rattus_norvegicus
ENSAPLG00000010125	SRP54	100	98.800	ENSRROG00000041292	SRP54	97	98.800	Rhinopithecus_roxellana
ENSAPLG00000010125	SRP54	86	52.834	YPR088C	SRP54	81	52.834	Saccharomyces_cerevisiae
ENSAPLG00000010125	SRP54	96	97.908	ENSSBOG00000035145	SRP54	95	97.908	Saimiri_boliviensis_boliviensis
ENSAPLG00000010125	SRP54	63	99.042	ENSSHAG00000000671	SRP54	91	99.042	Sarcophilus_harrisii
ENSAPLG00000010125	SRP54	95	95.570	ENSSFOG00015013920	srp54	94	95.570	Scleropages_formosus
ENSAPLG00000010125	SRP54	95	94.515	ENSSMAG00000002441	srp54	89	94.515	Scophthalmus_maximus
ENSAPLG00000010125	SRP54	95	94.937	ENSSDUG00000018586	srp54	94	94.937	Seriola_dumerili
ENSAPLG00000010125	SRP54	95	94.726	ENSSLDG00000010476	srp54	94	94.726	Seriola_lalandi_dorsalis
ENSAPLG00000010125	SRP54	95	98.734	ENSSARG00000002744	SRP54	94	98.734	Sorex_araneus
ENSAPLG00000010125	SRP54	95	99.578	ENSSPUG00000013101	SRP54	94	99.578	Sphenodon_punctatus
ENSAPLG00000010125	SRP54	95	95.148	ENSSPAG00000002354	srp54	94	95.148	Stegastes_partitus
ENSAPLG00000010125	SRP54	95	98.734	ENSSSCG00000001955	SRP54	94	98.734	Sus_scrofa
ENSAPLG00000010125	SRP54	100	100.000	ENSTGUG00000011945	-	100	100.000	Taeniopygia_guttata
ENSAPLG00000010125	SRP54	95	94.515	ENSTRUG00000007057	srp54	94	94.515	Takifugu_rubripes
ENSAPLG00000010125	SRP54	95	94.304	ENSTNIG00000002589	srp54	94	94.304	Tetraodon_nigroviridis
ENSAPLG00000010125	SRP54	83	89.448	ENSTBEG00000011409	SRP54	93	89.448	Tupaia_belangeri
ENSAPLG00000010125	SRP54	95	87.975	ENSTTRG00000000928	SRP54	94	87.975	Tursiops_truncatus
ENSAPLG00000010125	SRP54	52	98.855	ENSUAMG00000012385	SRP54	100	98.855	Ursus_americanus
ENSAPLG00000010125	SRP54	95	98.734	ENSUMAG00000011234	SRP54	94	98.734	Ursus_maritimus
ENSAPLG00000010125	SRP54	95	98.523	ENSVPAG00000005668	SRP54	100	98.523	Vicugna_pacos
ENSAPLG00000010125	SRP54	95	98.734	ENSVVUG00000019962	SRP54	94	98.734	Vulpes_vulpes
ENSAPLG00000010125	SRP54	95	80.713	ENSXETG00000012290	srp54	94	80.713	Xenopus_tropicalis
ENSAPLG00000010125	SRP54	89	95.260	ENSXCOG00000004658	srp54	96	95.260	Xiphophorus_couchianus
ENSAPLG00000010125	SRP54	95	95.359	ENSXMAG00000018315	srp54	94	95.359	Xiphophorus_maculatus