EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000010357 (Gene tree)
Gene ID: -
Gene Symbol: PRPF8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 19197 bases
Position: chrKB743696.1:424439-443635
Accession: 101795413
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000010131	RRM_4	PF10598.9	1.7e-48	1	1
ENSAPLP00000010131	U5_2-snRNA_bdg	PF10597.9	3.5e-74	1	1
ENSAPLP00000010131	PRO8NT	PF08082.11	2.1e-66	1	1
ENSAPLP00000010131	U6-snRNA_bdg	PF10596.9	8.6e-90	1	1
ENSAPLP00000010131	PROCN	PF08083.11	4.3e-237	1	1
ENSAPLP00000010131	PRP8_domainIV	PF12134.8	2e-130	1	1
ENSAPLP00000010131	PROCT	PF08084.11	3.6e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000010838	PRPF8-201	6747	XM_005025014	ENSAPLP00000010131	2248 (aa)	XP_005025071	U3ISA8

Gene Model

Click here to download ENSAPLG00000010357's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000010357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000010357	PRPF8	100	99.555	ENSG00000174231	PRPF8	96	99.555	Homo_sapiens
ENSAPLG00000010357	PRPF8	100	98.221	ENSAPOG00000010079	prpf8	96	98.221	Acanthochromis_polyacanthus
ENSAPLG00000010357	PRPF8	100	99.555	ENSAMEG00000007940	PRPF8	96	99.555	Ailuropoda_melanoleuca
ENSAPLG00000010357	PRPF8	100	96.715	ENSACIG00000018280	prpf8	96	96.715	Amphilophus_citrinellus
ENSAPLG00000010357	PRPF8	100	98.221	ENSAOCG00000010725	prpf8	96	98.221	Amphiprion_ocellaris
ENSAPLG00000010357	PRPF8	100	98.221	ENSAPEG00000014397	prpf8	96	98.221	Amphiprion_percula
ENSAPLG00000010357	PRPF8	100	97.553	ENSATEG00000010062	prpf8	96	97.553	Anabas_testudineus
ENSAPLG00000010357	PRPF8	82	97.736	ENSACAG00000014784	PRPF8	95	97.736	Anolis_carolinensis
ENSAPLG00000010357	PRPF8	100	99.555	ENSANAG00000032629	PRPF8	96	99.555	Aotus_nancymaae
ENSAPLG00000010357	PRPF8	100	98.176	ENSACLG00000020858	prpf8	97	98.176	Astatotilapia_calliptera
ENSAPLG00000010357	PRPF8	100	98.132	ENSAMXG00000020291	prpf8	96	98.132	Astyanax_mexicanus
ENSAPLG00000010357	PRPF8	100	99.555	ENSBTAG00000011488	PRPF8	96	99.555	Bos_taurus
ENSAPLG00000010357	PRPF8	100	87.134	WBGene00004187	prp-8	97	87.223	Caenorhabditis_elegans
ENSAPLG00000010357	PRPF8	100	99.555	ENSCJAG00000001911	PRPF8	96	99.555	Callithrix_jacchus
ENSAPLG00000010357	PRPF8	100	99.555	ENSCAFG00000019221	PRPF8	96	99.555	Canis_familiaris
ENSAPLG00000010357	PRPF8	99	99.554	ENSCAFG00020009943	PRPF8	100	99.554	Canis_lupus_dingo
ENSAPLG00000010357	PRPF8	100	99.555	ENSCHIG00000017499	PRPF8	96	99.555	Capra_hircus
ENSAPLG00000010357	PRPF8	100	99.555	ENSTSYG00000014120	PRPF8	96	99.555	Carlito_syrichta
ENSAPLG00000010357	PRPF8	100	97.331	ENSCAPG00000009459	PRPF8	99	97.331	Cavia_aperea
ENSAPLG00000010357	PRPF8	100	99.555	ENSCPOG00000010379	PRPF8	96	99.555	Cavia_porcellus
ENSAPLG00000010357	PRPF8	100	99.555	ENSCCAG00000031983	-	96	99.555	Cebus_capucinus
ENSAPLG00000010357	PRPF8	100	99.555	ENSCATG00000038595	PRPF8	96	99.555	Cercocebus_atys
ENSAPLG00000010357	PRPF8	100	99.555	ENSCLAG00000004388	PRPF8	96	99.555	Chinchilla_lanigera
ENSAPLG00000010357	PRPF8	100	99.555	ENSCSAG00000013929	PRPF8	96	99.555	Chlorocebus_sabaeus
ENSAPLG00000010357	PRPF8	80	98.000	ENSCHOG00000008590	PRPF8	84	98.000	Choloepus_hoffmanni
ENSAPLG00000010357	PRPF8	100	99.778	ENSCPBG00000020409	PRPF8	96	99.778	Chrysemys_picta_bellii
ENSAPLG00000010357	PRPF8	100	92.993	ENSCSAVG00000007825	-	100	89.844	Ciona_savignyi
ENSAPLG00000010357	PRPF8	100	99.555	ENSCANG00000043088	PRPF8	96	99.555	Colobus_angolensis_palliatus
ENSAPLG00000010357	PRPF8	76	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSAPLG00000010357	PRPF8	100	98.132	ENSCSEG00000007905	prpf8	96	98.132	Cynoglossus_semilaevis
ENSAPLG00000010357	PRPF8	100	98.176	ENSDARG00000026180	prpf8	96	98.176	Danio_rerio
ENSAPLG00000010357	PRPF8	93	99.568	ENSDNOG00000018471	PRPF8	95	99.568	Dasypus_novemcinctus
ENSAPLG00000010357	PRPF8	83	98.790	ENSDORG00000006185	Prpf8	91	98.790	Dipodomys_ordii
ENSAPLG00000010357	PRPF8	100	92.044	FBgn0033688	Prp8	94	92.044	Drosophila_melanogaster
ENSAPLG00000010357	PRPF8	100	93.906	ENSETEG00000017592	PRPF8	96	93.906	Echinops_telfairi
ENSAPLG00000010357	PRPF8	100	94.175	ENSEBUG00000006548	prpf8	96	94.175	Eptatretus_burgeri
ENSAPLG00000010357	PRPF8	100	99.555	ENSEASG00005009514	PRPF8	96	99.622	Equus_asinus_asinus
ENSAPLG00000010357	PRPF8	100	99.555	ENSECAG00000021318	PRPF8	99	99.555	Equus_caballus
ENSAPLG00000010357	PRPF8	66	99.259	ENSEEUG00000012120	-	64	99.259	Erinaceus_europaeus
ENSAPLG00000010357	PRPF8	98	96.906	ENSELUG00000007120	prpf8	95	96.906	Esox_lucius
ENSAPLG00000010357	PRPF8	100	99.555	ENSFCAG00000006297	PRPF8	96	99.555	Felis_catus
ENSAPLG00000010357	PRPF8	100	99.867	ENSFALG00000006628	PRPF8	96	99.867	Ficedula_albicollis
ENSAPLG00000010357	PRPF8	100	99.555	ENSFDAG00000004711	PRPF8	96	99.555	Fukomys_damarensis
ENSAPLG00000010357	PRPF8	100	97.909	ENSFHEG00000021084	prpf8	96	97.909	Fundulus_heteroclitus
ENSAPLG00000010357	PRPF8	100	95.866	ENSGMOG00000002028	prpf8	96	95.866	Gadus_morhua
ENSAPLG00000010357	PRPF8	100	99.867	ENSGALG00000002943	PRPF8	96	99.867	Gallus_gallus
ENSAPLG00000010357	PRPF8	100	97.954	ENSGAFG00000010337	prpf8	96	97.954	Gambusia_affinis
ENSAPLG00000010357	PRPF8	100	98.043	ENSGACG00000008504	prpf8	96	98.043	Gasterosteus_aculeatus
ENSAPLG00000010357	PRPF8	100	99.778	ENSGAGG00000008350	PRPF8	96	99.778	Gopherus_agassizii
ENSAPLG00000010357	PRPF8	100	99.555	ENSGGOG00000005516	PRPF8	96	99.555	Gorilla_gorilla
ENSAPLG00000010357	PRPF8	100	98.221	ENSHBUG00000016192	prpf8	96	98.221	Haplochromis_burtoni
ENSAPLG00000010357	PRPF8	100	99.555	ENSHGLG00000012029	PRPF8	96	99.555	Heterocephalus_glaber_female
ENSAPLG00000010357	PRPF8	100	99.555	ENSHGLG00100016494	PRPF8	96	99.555	Heterocephalus_glaber_male
ENSAPLG00000010357	PRPF8	100	98.132	ENSHCOG00000016414	prpf8	96	98.132	Hippocampus_comes
ENSAPLG00000010357	PRPF8	100	98.087	ENSIPUG00000023230	prpf8	96	98.087	Ictalurus_punctatus
ENSAPLG00000010357	PRPF8	100	99.555	ENSSTOG00000005128	PRPF8	96	99.555	Ictidomys_tridecemlineatus
ENSAPLG00000010357	PRPF8	100	97.286	ENSJJAG00000021159	Prpf8	96	97.286	Jaculus_jaculus
ENSAPLG00000010357	PRPF8	100	98.132	ENSKMAG00000016118	prpf8	96	98.132	Kryptolebias_marmoratus
ENSAPLG00000010357	PRPF8	100	97.998	ENSLBEG00000026903	prpf8	96	97.998	Labrus_bergylta
ENSAPLG00000010357	PRPF8	92	98.456	ENSLACG00000010479	PRPF8	99	98.456	Latimeria_chalumnae
ENSAPLG00000010357	PRPF8	100	98.355	ENSLOCG00000005409	prpf8	96	98.355	Lepisosteus_oculatus
ENSAPLG00000010357	PRPF8	100	99.555	ENSLAFG00000015445	PRPF8	96	99.555	Loxodonta_africana
ENSAPLG00000010357	PRPF8	100	99.555	ENSMFAG00000039995	PRPF8	96	99.555	Macaca_fascicularis
ENSAPLG00000010357	PRPF8	100	99.555	ENSMMUG00000004820	PRPF8	96	99.555	Macaca_mulatta
ENSAPLG00000010357	PRPF8	100	99.555	ENSMNEG00000035713	PRPF8	96	99.555	Macaca_nemestrina
ENSAPLG00000010357	PRPF8	100	99.555	ENSMLEG00000037937	PRPF8	96	99.555	Mandrillus_leucophaeus
ENSAPLG00000010357	PRPF8	100	98.132	ENSMAMG00000008919	prpf8	96	98.132	Mastacembelus_armatus
ENSAPLG00000010357	PRPF8	100	98.176	ENSMZEG00005015073	prpf8	96	98.176	Maylandia_zebra
ENSAPLG00000010357	PRPF8	100	99.867	ENSMGAG00000004769	PRPF8	96	99.867	Meleagris_gallopavo
ENSAPLG00000010357	PRPF8	100	99.511	ENSMICG00000010320	PRPF8	96	99.511	Microcebus_murinus
ENSAPLG00000010357	PRPF8	100	99.511	ENSMOCG00000016838	Prpf8	96	99.511	Microtus_ochrogaster
ENSAPLG00000010357	PRPF8	100	97.642	ENSMMOG00000011887	prpf8	96	97.642	Mola_mola
ENSAPLG00000010357	PRPF8	100	99.555	ENSMODG00000010480	PRPF8	96	99.555	Monodelphis_domestica
ENSAPLG00000010357	PRPF8	97	97.621	ENSMALG00000003558	prpf8	96	97.621	Monopterus_albus
ENSAPLG00000010357	PRPF8	100	99.466	MGP_CAROLIEiJ_G0016740	Prpf8	96	99.466	Mus_caroli
ENSAPLG00000010357	PRPF8	100	99.466	ENSMUSG00000020850	Prpf8	96	99.466	Mus_musculus
ENSAPLG00000010357	PRPF8	100	99.422	MGP_PahariEiJ_G0017877	Prpf8	96	99.422	Mus_pahari
ENSAPLG00000010357	PRPF8	100	99.466	MGP_SPRETEiJ_G0017583	Prpf8	96	99.466	Mus_spretus
ENSAPLG00000010357	PRPF8	100	99.555	ENSMPUG00000013227	PRPF8	96	99.555	Mustela_putorius_furo
ENSAPLG00000010357	PRPF8	100	99.334	ENSMLUG00000002666	PRPF8	96	99.334	Myotis_lucifugus
ENSAPLG00000010357	PRPF8	100	97.687	ENSNGAG00000005305	Prpf8	96	97.687	Nannospalax_galili
ENSAPLG00000010357	PRPF8	100	98.221	ENSNBRG00000013127	prpf8	96	98.221	Neolamprologus_brichardi
ENSAPLG00000010357	PRPF8	97	97.508	ENSNLEG00000000897	PRPF8	94	97.508	Nomascus_leucogenys
ENSAPLG00000010357	PRPF8	100	97.687	ENSMEUG00000015999	PRPF8	98	97.687	Notamacropus_eugenii
ENSAPLG00000010357	PRPF8	100	99.244	ENSOPRG00000003102	PRPF8	96	99.244	Ochotona_princeps
ENSAPLG00000010357	PRPF8	100	99.555	ENSODEG00000008468	PRPF8	96	99.555	Octodon_degus
ENSAPLG00000010357	PRPF8	100	98.265	ENSONIG00000008153	prpf8	96	98.265	Oreochromis_niloticus
ENSAPLG00000010357	PRPF8	85	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSAPLG00000010357	PRPF8	100	99.555	ENSOCUG00000000081	PRPF8	96	99.555	Oryctolagus_cuniculus
ENSAPLG00000010357	PRPF8	100	98.132	ENSORLG00000008036	prpf8	96	98.088	Oryzias_latipes
ENSAPLG00000010357	PRPF8	100	98.088	ENSORLG00020021070	prpf8	95	98.088	Oryzias_latipes_hni
ENSAPLG00000010357	PRPF8	100	98.132	ENSORLG00015002340	prpf8	95	98.132	Oryzias_latipes_hsok
ENSAPLG00000010357	PRPF8	100	96.441	ENSOMEG00000016866	prpf8	95	96.441	Oryzias_melastigma
ENSAPLG00000010357	PRPF8	100	99.422	ENSOARG00000013312	PRPF8	96	99.422	Ovis_aries
ENSAPLG00000010357	PRPF8	100	99.555	ENSPPAG00000042753	PRPF8	96	99.555	Pan_paniscus
ENSAPLG00000010357	PRPF8	100	99.555	ENSPPRG00000008746	PRPF8	96	99.555	Panthera_pardus
ENSAPLG00000010357	PRPF8	100	99.466	ENSPTIG00000019200	PRPF8	96	99.466	Panthera_tigris_altaica
ENSAPLG00000010357	PRPF8	100	99.555	ENSPTRG00000039576	PRPF8	96	99.555	Pan_troglodytes
ENSAPLG00000010357	PRPF8	100	99.555	ENSPANG00000024607	PRPF8	96	99.555	Papio_anubis
ENSAPLG00000010357	PRPF8	100	98.443	ENSPKIG00000011201	prpf8	96	98.443	Paramormyrops_kingsleyae
ENSAPLG00000010357	PRPF8	100	99.733	ENSPSIG00000013393	PRPF8	96	99.733	Pelodiscus_sinensis
ENSAPLG00000010357	PRPF8	100	99.511	ENSPEMG00000021699	Prpf8	96	99.511	Peromyscus_maniculatus_bairdii
ENSAPLG00000010357	PRPF8	100	93.639	ENSPMAG00000005438	prpf8	100	93.683	Petromyzon_marinus
ENSAPLG00000010357	PRPF8	100	99.555	ENSPCIG00000022603	PRPF8	100	99.554	Phascolarctos_cinereus
ENSAPLG00000010357	PRPF8	100	98.087	ENSPFOG00000007005	prpf8	95	98.087	Poecilia_formosa
ENSAPLG00000010357	PRPF8	100	96.619	ENSPLAG00000020777	prpf8	96	96.619	Poecilia_latipinna
ENSAPLG00000010357	PRPF8	100	98.087	ENSPMEG00000004051	prpf8	95	98.087	Poecilia_mexicana
ENSAPLG00000010357	PRPF8	100	98.087	ENSPREG00000021902	prpf8	96	98.087	Poecilia_reticulata
ENSAPLG00000010357	PRPF8	100	99.555	ENSPPYG00000007777	PRPF8	96	99.555	Pongo_abelii
ENSAPLG00000010357	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	86	99.010	Procavia_capensis
ENSAPLG00000010357	PRPF8	100	99.511	ENSPCOG00000015182	PRPF8	96	99.511	Propithecus_coquereli
ENSAPLG00000010357	PRPF8	93	99.446	ENSPVAG00000002134	PRPF8	89	99.446	Pteropus_vampyrus
ENSAPLG00000010357	PRPF8	100	98.221	ENSPNYG00000016356	prpf8	96	98.221	Pundamilia_nyererei
ENSAPLG00000010357	PRPF8	100	98.221	ENSPNAG00000009247	prpf8	96	98.221	Pygocentrus_nattereri
ENSAPLG00000010357	PRPF8	100	99.466	ENSRNOG00000003495	Prpf8	96	99.466	Rattus_norvegicus
ENSAPLG00000010357	PRPF8	100	99.555	ENSRBIG00000031219	PRPF8	100	99.109	Rhinopithecus_bieti
ENSAPLG00000010357	PRPF8	100	99.555	ENSRROG00000038014	PRPF8	100	99.109	Rhinopithecus_roxellana
ENSAPLG00000010357	PRPF8	100	63.019	YHR165C	PRP8	93	63.063	Saccharomyces_cerevisiae
ENSAPLG00000010357	PRPF8	100	99.555	ENSSBOG00000029717	PRPF8	96	99.555	Saimiri_boliviensis_boliviensis
ENSAPLG00000010357	PRPF8	100	99.511	ENSSHAG00000006167	PRPF8	96	99.511	Sarcophilus_harrisii
ENSAPLG00000010357	PRPF8	100	98.221	ENSSFOG00015013905	prpf8	96	98.221	Scleropages_formosus
ENSAPLG00000010357	PRPF8	100	98.043	ENSSMAG00000017736	prpf8	96	98.043	Scophthalmus_maximus
ENSAPLG00000010357	PRPF8	100	98.221	ENSSDUG00000003029	prpf8	96	98.221	Seriola_dumerili
ENSAPLG00000010357	PRPF8	71	98.874	ENSSLDG00000017096	prpf8	100	98.874	Seriola_lalandi_dorsalis
ENSAPLG00000010357	PRPF8	87	98.084	ENSSARG00000002892	PRPF8	83	98.084	Sorex_araneus
ENSAPLG00000010357	PRPF8	100	99.555	ENSSPUG00000007463	PRPF8	96	99.555	Sphenodon_punctatus
ENSAPLG00000010357	PRPF8	100	97.598	ENSSPAG00000015639	prpf8	96	97.598	Stegastes_partitus
ENSAPLG00000010357	PRPF8	100	99.555	ENSSSCG00000017817	PRPF8	96	99.555	Sus_scrofa
ENSAPLG00000010357	PRPF8	54	99.825	ENSTGUG00000015597	-	95	99.825	Taeniopygia_guttata
ENSAPLG00000010357	PRPF8	100	99.867	ENSTGUG00000005648	-	96	99.867	Taeniopygia_guttata
ENSAPLG00000010357	PRPF8	100	97.998	ENSTRUG00000015906	prpf8	96	97.998	Takifugu_rubripes
ENSAPLG00000010357	PRPF8	94	98.865	ENSTNIG00000003460	prpf8	95	98.865	Tetraodon_nigroviridis
ENSAPLG00000010357	PRPF8	92	99.796	ENSTBEG00000006431	PRPF8	89	99.796	Tupaia_belangeri
ENSAPLG00000010357	PRPF8	100	98.932	ENSTTRG00000006869	PRPF8	96	98.932	Tursiops_truncatus
ENSAPLG00000010357	PRPF8	52	98.644	ENSUAMG00000015644	-	89	98.644	Ursus_americanus
ENSAPLG00000010357	PRPF8	100	99.288	ENSUMAG00000009385	PRPF8	96	99.288	Ursus_maritimus
ENSAPLG00000010357	PRPF8	70	99.310	ENSVPAG00000006063	-	67	99.310	Vicugna_pacos
ENSAPLG00000010357	PRPF8	100	99.555	ENSVVUG00000021695	PRPF8	95	99.555	Vulpes_vulpes
ENSAPLG00000010357	PRPF8	100	99.022	ENSXETG00000022259	prpf8	96	99.022	Xenopus_tropicalis
ENSAPLG00000010357	PRPF8	100	97.998	ENSXCOG00000012775	prpf8	96	97.998	Xiphophorus_couchianus
ENSAPLG00000010357	PRPF8	100	98.043	ENSXMAG00000008505	prpf8	96	98.043	Xiphophorus_maculatus