EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000010542 (Gene tree)
Gene ID: 101792978
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 14366 bases
Position: chrKB744027.1:89896-104261
Accession: 101792978
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000010349	CMS1	PF14617.6	1.3e-31	1	1
ENSAPLP00000010349	DEAD	PF00270.29	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000011062	CMSS1-201	1249	XM_005026582	ENSAPLP00000010349	230 (aa)	XP_005026639	U3ISX6

Gene Model

Click here to download ENSAPLG00000010542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000010542's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000010542	CMSS1	100	68.261	ENSG00000184220	CMSS1	99	74.074	Homo_sapiens
ENSAPLG00000010542	CMSS1	88	63.366	ENSAPOG00000010604	cmss1	96	60.759	Acanthochromis_polyacanthus
ENSAPLG00000010542	CMSS1	100	67.532	ENSAMEG00000004092	CMSS1	89	67.532	Ailuropoda_melanoleuca
ENSAPLG00000010542	CMSS1	95	52.968	ENSACIG00000021854	cmss1	82	52.968	Amphilophus_citrinellus
ENSAPLG00000010542	CMSS1	88	62.376	ENSAOCG00000013361	cmss1	70	62.376	Amphiprion_ocellaris
ENSAPLG00000010542	CMSS1	88	62.376	ENSAPEG00000005829	cmss1	70	62.376	Amphiprion_percula
ENSAPLG00000010542	CMSS1	98	60.088	ENSATEG00000008209	cmss1	79	60.262	Anabas_testudineus
ENSAPLG00000010542	CMSS1	100	74.678	ENSACAG00000011065	CMSS1	85	74.678	Anolis_carolinensis
ENSAPLG00000010542	CMSS1	100	67.826	ENSANAG00000023565	CMSS1	87	67.826	Aotus_nancymaae
ENSAPLG00000010542	CMSS1	88	63.366	ENSACLG00000027294	cmss1	69	63.366	Astatotilapia_calliptera
ENSAPLG00000010542	CMSS1	87	61.500	ENSAMXG00000002046	cmss1	69	61.386	Astyanax_mexicanus
ENSAPLG00000010542	CMSS1	99	68.559	ENSBTAG00000013663	CMSS1	83	68.559	Bos_taurus
ENSAPLG00000010542	CMSS1	100	68.261	ENSCJAG00000000610	CMSS1	87	68.261	Callithrix_jacchus
ENSAPLG00000010542	CMSS1	100	68.696	ENSCAFG00000009230	CMSS1	83	68.696	Canis_familiaris
ENSAPLG00000010542	CMSS1	98	64.602	ENSCAFG00020024156	-	69	64.602	Canis_lupus_dingo
ENSAPLG00000010542	CMSS1	100	68.696	ENSCAFG00020009464	-	84	68.696	Canis_lupus_dingo
ENSAPLG00000010542	CMSS1	99	68.996	ENSCHIG00000013003	CMSS1	83	68.996	Capra_hircus
ENSAPLG00000010542	CMSS1	100	67.826	ENSTSYG00000009266	CMSS1	88	67.826	Carlito_syrichta
ENSAPLG00000010542	CMSS1	97	58.036	ENSCAPG00000013584	CMSS1	87	62.903	Cavia_aperea
ENSAPLG00000010542	CMSS1	100	69.130	ENSCPOG00000014680	CMSS1	82	69.130	Cavia_porcellus
ENSAPLG00000010542	CMSS1	100	68.696	ENSCCAG00000034685	CMSS1	87	68.696	Cebus_capucinus
ENSAPLG00000010542	CMSS1	100	68.696	ENSCATG00000031980	CMSS1	88	68.696	Cercocebus_atys
ENSAPLG00000010542	CMSS1	100	69.565	ENSCLAG00000011241	CMSS1	98	69.565	Chinchilla_lanigera
ENSAPLG00000010542	CMSS1	100	68.696	ENSCSAG00000006024	CMSS1	93	68.696	Chlorocebus_sabaeus
ENSAPLG00000010542	CMSS1	100	50.000	ENSCHOG00000012098	CMSS1	83	50.000	Choloepus_hoffmanni
ENSAPLG00000010542	CMSS1	98	39.035	ENSCING00000014848	-	99	42.246	Ciona_intestinalis
ENSAPLG00000010542	CMSS1	54	39.683	ENSCSAVG00000002309	-	99	39.683	Ciona_savignyi
ENSAPLG00000010542	CMSS1	100	68.261	ENSCANG00000031337	CMSS1	88	68.261	Colobus_angolensis_palliatus
ENSAPLG00000010542	CMSS1	100	67.391	ENSCGRG00001014305	Cmss1	82	67.826	Cricetulus_griseus_chok1gshd
ENSAPLG00000010542	CMSS1	100	66.957	ENSCGRG00000006722	Cmss1	89	67.826	Cricetulus_griseus_crigri
ENSAPLG00000010542	CMSS1	88	66.337	ENSCSEG00000004958	cmss1	69	66.337	Cynoglossus_semilaevis
ENSAPLG00000010542	CMSS1	97	59.910	ENSCVAG00000005039	cmss1	70	62.376	Cyprinodon_variegatus
ENSAPLG00000010542	CMSS1	99	56.710	ENSDARG00000112579	cmss1	79	56.710	Danio_rerio
ENSAPLG00000010542	CMSS1	100	68.261	ENSDNOG00000040418	CMSS1	83	68.261	Dasypus_novemcinctus
ENSAPLG00000010542	CMSS1	100	69.130	ENSDORG00000010461	Cmss1	82	69.130	Dipodomys_ordii
ENSAPLG00000010542	CMSS1	57	46.970	ENSEBUG00000002156	-	96	46.970	Eptatretus_burgeri
ENSAPLG00000010542	CMSS1	100	69.130	ENSEASG00005010966	CMSS1	99	68.950	Equus_asinus_asinus
ENSAPLG00000010542	CMSS1	100	69.130	ENSECAG00000015662	CMSS1	99	68.722	Equus_caballus
ENSAPLG00000010542	CMSS1	99	48.472	ENSEEUG00000007624	-	82	48.908	Erinaceus_europaeus
ENSAPLG00000010542	CMSS1	98	59.292	ENSELUG00000019459	cmss1	75	59.292	Esox_lucius
ENSAPLG00000010542	CMSS1	100	69.565	ENSFCAG00000044577	CMSS1	82	69.565	Felis_catus
ENSAPLG00000010542	CMSS1	100	90.870	ENSFALG00000005816	CMSS1	97	90.870	Ficedula_albicollis
ENSAPLG00000010542	CMSS1	99	66.812	ENSFDAG00000012577	CMSS1	100	66.812	Fukomys_damarensis
ENSAPLG00000010542	CMSS1	99	56.522	ENSFHEG00000012008	cmss1	95	58.696	Fundulus_heteroclitus
ENSAPLG00000010542	CMSS1	95	58.744	ENSGMOG00000016729	cmss1	72	60.891	Gadus_morhua
ENSAPLG00000010542	CMSS1	100	93.043	ENSGALG00000015267	CMSS1	88	93.043	Gallus_gallus
ENSAPLG00000010542	CMSS1	90	61.836	ENSGAFG00000021217	cmss1	77	61.386	Gambusia_affinis
ENSAPLG00000010542	CMSS1	88	62.376	ENSGACG00000002798	cmss1	72	62.376	Gasterosteus_aculeatus
ENSAPLG00000010542	CMSS1	100	81.304	ENSGAGG00000019861	CMSS1	89	81.304	Gopherus_agassizii
ENSAPLG00000010542	CMSS1	100	69.130	ENSGGOG00000014125	CMSS1	88	69.130	Gorilla_gorilla
ENSAPLG00000010542	CMSS1	88	63.366	ENSHBUG00000008431	cmss1	71	63.366	Haplochromis_burtoni
ENSAPLG00000010542	CMSS1	99	69.604	ENSHGLG00000019481	CMSS1	92	69.604	Heterocephalus_glaber_female
ENSAPLG00000010542	CMSS1	99	69.604	ENSHGLG00100010314	CMSS1	91	69.604	Heterocephalus_glaber_male
ENSAPLG00000010542	CMSS1	88	62.376	ENSHCOG00000003222	cmss1	77	60.619	Hippocampus_comes
ENSAPLG00000010542	CMSS1	97	59.641	ENSIPUG00000011591	cmss1	77	59.641	Ictalurus_punctatus
ENSAPLG00000010542	CMSS1	100	68.261	ENSSTOG00000019366	CMSS1	82	68.261	Ictidomys_tridecemlineatus
ENSAPLG00000010542	CMSS1	100	69.130	ENSJJAG00000014894	Cmss1	90	69.802	Jaculus_jaculus
ENSAPLG00000010542	CMSS1	88	57.921	ENSKMAG00000002390	cmss1	81	57.921	Kryptolebias_marmoratus
ENSAPLG00000010542	CMSS1	88	60.591	ENSLBEG00000006298	cmss1	83	60.591	Labrus_bergylta
ENSAPLG00000010542	CMSS1	99	67.391	ENSLACG00000009293	CMSS1	100	67.391	Latimeria_chalumnae
ENSAPLG00000010542	CMSS1	99	59.211	ENSLOCG00000009391	cmss1	81	58.772	Lepisosteus_oculatus
ENSAPLG00000010542	CMSS1	99	67.249	ENSLAFG00000017509	CMSS1	100	67.249	Loxodonta_africana
ENSAPLG00000010542	CMSS1	100	69.130	ENSMFAG00000045006	CMSS1	88	69.130	Macaca_fascicularis
ENSAPLG00000010542	CMSS1	100	68.696	ENSMMUG00000002939	CMSS1	97	68.636	Macaca_mulatta
ENSAPLG00000010542	CMSS1	100	69.130	ENSMNEG00000031315	CMSS1	88	69.130	Macaca_nemestrina
ENSAPLG00000010542	CMSS1	100	68.696	ENSMLEG00000033660	CMSS1	88	68.696	Mandrillus_leucophaeus
ENSAPLG00000010542	CMSS1	88	63.366	ENSMAMG00000017176	cmss1	70	63.366	Mastacembelus_armatus
ENSAPLG00000010542	CMSS1	88	63.366	ENSMZEG00005021886	cmss1	69	63.366	Maylandia_zebra
ENSAPLG00000010542	CMSS1	99	92.576	ENSMGAG00000014360	CMSS1	100	92.576	Meleagris_gallopavo
ENSAPLG00000010542	CMSS1	100	46.087	ENSMAUG00000020609	Cmss1	78	46.957	Mesocricetus_auratus
ENSAPLG00000010542	CMSS1	100	67.826	ENSMICG00000048977	CMSS1	88	67.826	Microcebus_murinus
ENSAPLG00000010542	CMSS1	100	69.130	ENSMOCG00000021937	Cmss1	83	69.130	Microtus_ochrogaster
ENSAPLG00000010542	CMSS1	88	60.891	ENSMMOG00000019794	cmss1	84	60.891	Mola_mola
ENSAPLG00000010542	CMSS1	100	72.174	ENSMODG00000002275	CMSS1	86	72.174	Monodelphis_domestica
ENSAPLG00000010542	CMSS1	98	62.281	ENSMALG00000004250	cmss1	78	62.281	Monopterus_albus
ENSAPLG00000010542	CMSS1	100	68.696	MGP_CAROLIEiJ_G0020824	Cmss1	83	68.696	Mus_caroli
ENSAPLG00000010542	CMSS1	100	68.696	ENSMUSG00000022748	Cmss1	83	68.696	Mus_musculus
ENSAPLG00000010542	CMSS1	100	68.261	MGP_PahariEiJ_G0016524	Cmss1	83	68.261	Mus_pahari
ENSAPLG00000010542	CMSS1	100	68.696	MGP_SPRETEiJ_G0021724	Cmss1	83	68.696	Mus_spretus
ENSAPLG00000010542	CMSS1	99	69.432	ENSMPUG00000011324	CMSS1	88	69.432	Mustela_putorius_furo
ENSAPLG00000010542	CMSS1	100	68.966	ENSMLUG00000001131	CMSS1	88	68.966	Myotis_lucifugus
ENSAPLG00000010542	CMSS1	100	68.696	ENSNGAG00000020316	Cmss1	82	68.696	Nannospalax_galili
ENSAPLG00000010542	CMSS1	88	63.366	ENSNBRG00000003095	cmss1	69	63.366	Neolamprologus_brichardi
ENSAPLG00000010542	CMSS1	100	70.000	ENSNLEG00000034172	CMSS1	88	70.000	Nomascus_leucogenys
ENSAPLG00000010542	CMSS1	99	62.445	ENSMEUG00000014505	CMSS1	100	62.445	Notamacropus_eugenii
ENSAPLG00000010542	CMSS1	100	69.565	ENSOPRG00000002986	CMSS1	82	69.565	Ochotona_princeps
ENSAPLG00000010542	CMSS1	100	68.696	ENSODEG00000005226	-	82	68.696	Octodon_degus
ENSAPLG00000010542	CMSS1	94	58.333	ENSODEG00000009446	-	84	58.333	Octodon_degus
ENSAPLG00000010542	CMSS1	99	66.812	ENSODEG00000003558	-	84	66.812	Octodon_degus
ENSAPLG00000010542	CMSS1	100	58.696	ENSODEG00000001853	-	82	58.696	Octodon_degus
ENSAPLG00000010542	CMSS1	88	62.376	ENSONIG00000006678	cmss1	77	62.376	Oreochromis_niloticus
ENSAPLG00000010542	CMSS1	100	75.652	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSAPLG00000010542	CMSS1	100	69.565	ENSOCUG00000025366	CMSS1	83	69.565	Oryctolagus_cuniculus
ENSAPLG00000010542	CMSS1	88	62.871	ENSORLG00000020340	cmss1	71	62.871	Oryzias_latipes
ENSAPLG00000010542	CMSS1	95	55.251	ENSORLG00020012235	cmss1	85	55.941	Oryzias_latipes_hni
ENSAPLG00000010542	CMSS1	88	55.941	ENSORLG00015015551	cmss1	75	55.941	Oryzias_latipes_hsok
ENSAPLG00000010542	CMSS1	97	59.821	ENSOMEG00000012555	cmss1	70	62.376	Oryzias_melastigma
ENSAPLG00000010542	CMSS1	99	66.376	ENSOGAG00000002045	CMSS1	100	66.376	Otolemur_garnettii
ENSAPLG00000010542	CMSS1	99	69.130	ENSOARG00000017899	CMSS1	79	69.130	Ovis_aries
ENSAPLG00000010542	CMSS1	100	69.130	ENSPPAG00000038515	CMSS1	84	69.130	Pan_paniscus
ENSAPLG00000010542	CMSS1	100	69.565	ENSPPRG00000016767	CMSS1	82	69.565	Panthera_pardus
ENSAPLG00000010542	CMSS1	100	69.130	ENSPTIG00000018274	CMSS1	82	69.130	Panthera_tigris_altaica
ENSAPLG00000010542	CMSS1	100	68.696	ENSPTRG00000015157	CMSS1	93	68.696	Pan_troglodytes
ENSAPLG00000010542	CMSS1	99	68.559	ENSPANG00000019980	CMSS1	91	68.559	Papio_anubis
ENSAPLG00000010542	CMSS1	99	63.793	ENSPKIG00000012609	cmss1	85	63.043	Paramormyrops_kingsleyae
ENSAPLG00000010542	CMSS1	100	83.913	ENSPSIG00000003849	CMSS1	100	83.913	Pelodiscus_sinensis
ENSAPLG00000010542	CMSS1	88	63.054	ENSPMGG00000010286	cmss1	87	63.054	Periophthalmus_magnuspinnatus
ENSAPLG00000010542	CMSS1	100	69.130	ENSPEMG00000016384	Cmss1	82	69.130	Peromyscus_maniculatus_bairdii
ENSAPLG00000010542	CMSS1	89	54.902	ENSPMAG00000001146	cmss1	99	55.446	Petromyzon_marinus
ENSAPLG00000010542	CMSS1	100	73.478	ENSPCIG00000015656	CMSS1	87	73.478	Phascolarctos_cinereus
ENSAPLG00000010542	CMSS1	88	60.396	ENSPFOG00000016849	cmss1	71	60.396	Poecilia_formosa
ENSAPLG00000010542	CMSS1	88	59.901	ENSPLAG00000008323	cmss1	71	59.901	Poecilia_latipinna
ENSAPLG00000010542	CMSS1	88	60.396	ENSPMEG00000021020	cmss1	70	60.396	Poecilia_mexicana
ENSAPLG00000010542	CMSS1	88	59.406	ENSPREG00000007618	cmss1	69	59.406	Poecilia_reticulata
ENSAPLG00000010542	CMSS1	100	70.000	ENSPPYG00000013606	CMSS1	84	70.000	Pongo_abelii
ENSAPLG00000010542	CMSS1	100	67.391	ENSPCOG00000020035	CMSS1	88	68.261	Propithecus_coquereli
ENSAPLG00000010542	CMSS1	100	58.261	ENSPVAG00000017031	CMSS1	82	58.261	Pteropus_vampyrus
ENSAPLG00000010542	CMSS1	77	65.909	ENSPNYG00000013428	cmss1	65	65.909	Pundamilia_nyererei
ENSAPLG00000010542	CMSS1	99	58.696	ENSPNAG00000007912	cmss1	78	58.696	Pygocentrus_nattereri
ENSAPLG00000010542	CMSS1	100	68.261	ENSRNOG00000027888	Cmss1	89	68.261	Rattus_norvegicus
ENSAPLG00000010542	CMSS1	100	68.261	ENSRBIG00000037931	CMSS1	88	68.261	Rhinopithecus_bieti
ENSAPLG00000010542	CMSS1	100	68.261	ENSRROG00000042910	CMSS1	88	68.261	Rhinopithecus_roxellana
ENSAPLG00000010542	CMSS1	100	67.391	ENSSBOG00000030980	CMSS1	87	67.391	Saimiri_boliviensis_boliviensis
ENSAPLG00000010542	CMSS1	100	71.739	ENSSHAG00000009321	CMSS1	91	72.174	Sarcophilus_harrisii
ENSAPLG00000010542	CMSS1	99	63.913	ENSSFOG00015001509	cmss1	79	63.913	Scleropages_formosus
ENSAPLG00000010542	CMSS1	88	65.347	ENSSMAG00000001653	cmss1	69	65.347	Scophthalmus_maximus
ENSAPLG00000010542	CMSS1	100	61.207	ENSSDUG00000007719	cmss1	81	60.776	Seriola_dumerili
ENSAPLG00000010542	CMSS1	90	64.251	ENSSLDG00000012300	cmss1	73	61.582	Seriola_lalandi_dorsalis
ENSAPLG00000010542	CMSS1	100	57.391	ENSSARG00000003584	CMSS1	82	57.391	Sorex_araneus
ENSAPLG00000010542	CMSS1	99	80.617	ENSSPUG00000003865	CMSS1	100	80.617	Sphenodon_punctatus
ENSAPLG00000010542	CMSS1	90	65.534	ENSSPAG00000019182	cmss1	63	65.347	Stegastes_partitus
ENSAPLG00000010542	CMSS1	100	68.261	ENSSSCG00000011970	CMSS1	82	68.261	Sus_scrofa
ENSAPLG00000010542	CMSS1	100	90.435	ENSTGUG00000013635	CMSS1	100	90.435	Taeniopygia_guttata
ENSAPLG00000010542	CMSS1	88	63.366	ENSTRUG00000015265	cmss1	72	63.366	Takifugu_rubripes
ENSAPLG00000010542	CMSS1	88	57.426	ENSTNIG00000002880	cmss1	73	57.426	Tetraodon_nigroviridis
ENSAPLG00000010542	CMSS1	99	47.598	ENSTBEG00000016722	CMSS1	81	47.598	Tupaia_belangeri
ENSAPLG00000010542	CMSS1	100	66.522	ENSTTRG00000001562	CMSS1	82	67.391	Tursiops_truncatus
ENSAPLG00000010542	CMSS1	100	68.696	ENSUAMG00000024209	CMSS1	100	68.304	Ursus_americanus
ENSAPLG00000010542	CMSS1	100	68.261	ENSUMAG00000001983	CMSS1	88	68.261	Ursus_maritimus
ENSAPLG00000010542	CMSS1	99	55.459	ENSVPAG00000000263	CMSS1	57	71.875	Vicugna_pacos
ENSAPLG00000010542	CMSS1	100	69.130	ENSVVUG00000021647	-	93	69.130	Vulpes_vulpes
ENSAPLG00000010542	CMSS1	98	66.372	ENSVVUG00000007776	-	89	66.372	Vulpes_vulpes
ENSAPLG00000010542	CMSS1	96	66.364	ENSXETG00000011858	cmss1	79	66.364	Xenopus_tropicalis
ENSAPLG00000010542	CMSS1	90	61.058	ENSXCOG00000018724	cmss1	69	60.891	Xiphophorus_couchianus
ENSAPLG00000010542	CMSS1	90	61.058	ENSXMAG00000011243	cmss1	76	60.891	Xiphophorus_maculatus