EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000011744 (Gene tree)
Gene ID: 101804062
Gene Symbol: RAB20
Alias: -
Full Name: RAB20%2C member RAS oncogene family
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 23905 bases
Position: chrKB742397.1:944303-968207
Accession: 101804062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000011490	MMR_HSR1	PF01926.23	7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000012218	RAB20-201	693	XM_005009055	ENSAPLP00000011490	230 (aa)	XP_005009112	R0M8G5

Gene Model

Click here to download ENSAPLG00000011744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000011744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000011744	RAB20	81	31.818	ENSAPLG00000004323	RAB7A	91	31.818
ENSAPLG00000011744	RAB20	53	36.220	ENSAPLG00000014962	RAB11A	59	36.220
ENSAPLG00000011744	RAB20	50	33.898	ENSAPLG00000006592	-	68	33.898
ENSAPLG00000011744	RAB20	54	36.434	ENSAPLG00000011046	-	59	36.434
ENSAPLG00000011744	RAB20	53	36.567	ENSAPLG00000009395	-	63	36.567
ENSAPLG00000011744	RAB20	65	31.013	ENSAPLG00000014543	RAB39B	73	31.013
ENSAPLG00000011744	RAB20	52	32.031	ENSAPLG00000006894	RAB33B	54	32.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000011744	RAB20	99	60.700	ENSATEG00000011117	rab20	100	60.700	Anabas_testudineus
ENSAPLG00000011744	RAB20	99	78.788	ENSACAG00000014045	RAB20	99	78.788	Anolis_carolinensis
ENSAPLG00000011744	RAB20	100	60.569	ENSAMXG00000003504	rab20	100	60.569	Astyanax_mexicanus
ENSAPLG00000011744	RAB20	99	84.483	ENSCPBG00000005866	RAB20	99	84.483	Chrysemys_picta_bellii
ENSAPLG00000011744	RAB20	99	65.801	ENSCSEG00000011160	rab20	100	65.801	Cynoglossus_semilaevis
ENSAPLG00000011744	RAB20	99	67.511	ENSDARG00000005049	rab20	97	67.511	Danio_rerio
ENSAPLG00000011744	RAB20	99	61.719	ENSELUG00000004092	rab20	98	61.719	Esox_lucius
ENSAPLG00000011744	RAB20	100	94.783	ENSFALG00000004409	RAB20	100	94.783	Ficedula_albicollis
ENSAPLG00000011744	RAB20	99	65.532	ENSGACG00000003527	rab20	100	65.532	Gasterosteus_aculeatus
ENSAPLG00000011744	RAB20	99	59.289	ENSHCOG00000013468	rab20	98	59.289	Hippocampus_comes
ENSAPLG00000011744	RAB20	100	67.932	ENSIPUG00000000432	RAB20	97	67.932	Ictalurus_punctatus
ENSAPLG00000011744	RAB20	100	67.932	ENSIPUG00000018288	RAB20	97	67.932	Ictalurus_punctatus
ENSAPLG00000011744	RAB20	99	73.276	ENSLACG00000011001	RAB20	99	73.276	Latimeria_chalumnae
ENSAPLG00000011744	RAB20	99	62.109	ENSMAMG00000015214	rab20	98	62.109	Mastacembelus_armatus
ENSAPLG00000011744	RAB20	99	64.286	ENSMMOG00000020022	rab20	100	64.286	Mola_mola
ENSAPLG00000011744	RAB20	99	74.249	ENSMEUG00000009442	RAB20	99	74.249	Notamacropus_eugenii
ENSAPLG00000011744	RAB20	86	50.000	ENSPMAG00000004439	rab20	99	51.628	Petromyzon_marinus
ENSAPLG00000011744	RAB20	99	63.485	ENSPNAG00000008867	rab20	99	63.485	Pygocentrus_nattereri
ENSAPLG00000011744	RAB20	99	61.569	ENSSMAG00000018818	rab20	100	61.569	Scophthalmus_maximus
ENSAPLG00000011744	RAB20	99	62.257	ENSSDUG00000005148	rab20	98	62.257	Seriola_dumerili
ENSAPLG00000011744	RAB20	100	95.652	ENSTGUG00000008797	RAB20	100	95.652	Taeniopygia_guttata
ENSAPLG00000011744	RAB20	99	59.922	ENSTRUG00000022951	rab20	98	59.922	Takifugu_rubripes
ENSAPLG00000011744	RAB20	94	63.801	ENSTNIG00000013920	rab20	100	62.553	Tetraodon_nigroviridis