EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSAPLG00000012442 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Anas_platyrhynchos
Status
putative
Strand
Plus strand
Length
22499 bases
Position
chrKB743696.1:513222-535720
Accession
101799316
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPLP00000012275tRNA_anti-codonPF01336.252.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPLT00000013010RPA1-2012948XM_005025034ENSAPLP00000012275674 (aa)-U3IYE9
Gene Model
Click here to download ENSAPLG00000012442's gene model file
Pathways
Pathway IDPathway NameSource
apla03030DNA replicationKEGG
apla03420Nucleotide excision repairKEGG
apla03430Mismatch repairKEGG
apla03440Homologous recombinationKEGG
apla03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPLG00000012442RPA19254.054ENSAPOG00000019409RPA18554.054Acanthochromis_polyacanthus
ENSAPLG00000012442RPA19954.505ENSAPOG00000011658rpa19953.221Acanthochromis_polyacanthus
ENSAPLG00000012442RPA110065.929ENSAMEG00000007706RPA19765.929Ailuropoda_melanoleuca
ENSAPLG00000012442RPA19849.849ENSACIG00000007277rpa19949.170Amphilophus_citrinellus
ENSAPLG00000012442RPA19850.000ENSACIG00000012881RPA19950.000Amphilophus_citrinellus
ENSAPLG00000012442RPA19954.978ENSAOCG00000023376rpa19954.294Amphiprion_ocellaris
ENSAPLG00000012442RPA110047.966ENSAOCG00000009003RPA19847.966Amphiprion_ocellaris
ENSAPLG00000012442RPA110047.397ENSAPEG00000019132RPA19053.714Amphiprion_percula
ENSAPLG00000012442RPA19954.829ENSAPEG00000008634rpa19954.141Amphiprion_percula
ENSAPLG00000012442RPA19754.504ENSATEG00000022024rpa19954.504Anabas_testudineus
ENSAPLG00000012442RPA110049.441ENSATEG00000006443RPA19849.022Anabas_testudineus
ENSAPLG00000012442RPA19071.464ENSACAG00000014490RPA19755.718Anolis_carolinensis
ENSAPLG00000012442RPA110064.697ENSANAG00000023456RPA19964.697Aotus_nancymaae
ENSAPLG00000012442RPA19654.938ENSACLG00000006640rpa19955.401Astatotilapia_calliptera
ENSAPLG00000012442RPA110050.354ENSACLG00000005223RPA19850.495Astatotilapia_calliptera
ENSAPLG00000012442RPA19857.855ENSAMXG00000008418rpa19853.412Astyanax_mexicanus
ENSAPLG00000012442RPA110065.583ENSBTAG00000009711RPA19865.436Bos_taurus
ENSAPLG00000012442RPA17530.820WBGene00017546rpa-17231.271Caenorhabditis_elegans
ENSAPLG00000012442RPA110065.044ENSCJAG00000001848RPA19865.192Callithrix_jacchus
ENSAPLG00000012442RPA19472.772ENSCAFG00000019249RPA19865.583Canis_familiaris
ENSAPLG00000012442RPA19472.772ENSCAFG00020009847RPA19865.583Canis_lupus_dingo
ENSAPLG00000012442RPA110065.583ENSCHIG00000026308RPA19865.436Capra_hircus
ENSAPLG00000012442RPA110065.929ENSTSYG00000003482-9865.487Carlito_syrichta
ENSAPLG00000012442RPA110059.823ENSCPOG00000000035RPA19859.823Cavia_porcellus
ENSAPLG00000012442RPA19268.868ENSCCAG00000010981RPA19768.868Cebus_capucinus
ENSAPLG00000012442RPA110061.595ENSCLAG00000015045-9761.595Chinchilla_lanigera
ENSAPLG00000012442RPA110065.288ENSCLAG00000005185-9865.288Chinchilla_lanigera
ENSAPLG00000012442RPA19268.868ENSCSAG00000013833RPA19768.868Chlorocebus_sabaeus
ENSAPLG00000012442RPA17666.602ENSCHOG00000009454-9966.602Choloepus_hoffmanni
ENSAPLG00000012442RPA19863.444ENSCHOG00000013540-9963.444Choloepus_hoffmanni
ENSAPLG00000012442RPA110063.864ENSCPBG00000020377RPA19986.253Chrysemys_picta_bellii
ENSAPLG00000012442RPA19938.201ENSCING00000023482-9737.977Ciona_intestinalis
ENSAPLG00000012442RPA110062.963ENSCANG00000030911RPA19962.963Colobus_angolensis_palliatus
ENSAPLG00000012442RPA19964.317ENSCGRG00001008197Rpa19864.317Cricetulus_griseus_chok1gshd
ENSAPLG00000012442RPA18562.093ENSCGRG00000000582Rpa19962.093Cricetulus_griseus_crigri
ENSAPLG00000012442RPA110051.173ENSCSEG00000013066rpa19850.735Cynoglossus_semilaevis
ENSAPLG00000012442RPA19946.965ENSCSEG00000012726RPA19847.344Cynoglossus_semilaevis
ENSAPLG00000012442RPA19954.720ENSCVAG00000019431rpa19954.334Cyprinodon_variegatus
ENSAPLG00000012442RPA19546.373ENSCVAG00000013446-9346.373Cyprinodon_variegatus
ENSAPLG00000012442RPA19857.357ENSDARG00000003938rpa19857.357Danio_rerio
ENSAPLG00000012442RPA110064.993ENSDNOG00000017218RPA19864.993Dasypus_novemcinctus
ENSAPLG00000012442RPA19472.030ENSDORG00000006199Rpa19771.756Dipodomys_ordii
ENSAPLG00000012442RPA19935.303FBgn0010173RpA-709635.894Drosophila_melanogaster
ENSAPLG00000012442RPA17471.154ENSETEG00000017608RPA18071.154Echinops_telfairi
ENSAPLG00000012442RPA110066.765ENSEASG00005009372RPA19966.913Equus_asinus_asinus
ENSAPLG00000012442RPA110063.220ENSECAG00000023886RPA19866.322Equus_caballus
ENSAPLG00000012442RPA17365.112ENSEEUG00000002186-6865.112Erinaceus_europaeus
ENSAPLG00000012442RPA19064.904ENSELUG00000021071rpa19853.835Esox_lucius
ENSAPLG00000012442RPA19148.232ENSELUG00000006136RPA19948.232Esox_lucius
ENSAPLG00000012442RPA110065.487ENSFCAG00000006306RPA19765.487Felis_catus
ENSAPLG00000012442RPA110075.668ENSFALG00000006575RPA19875.519Ficedula_albicollis
ENSAPLG00000012442RPA110065.140ENSFDAG00000007720RPA19864.993Fukomys_damarensis
ENSAPLG00000012442RPA19065.049ENSFHEG00000003580rpa19865.049Fundulus_heteroclitus
ENSAPLG00000012442RPA19952.259ENSGMOG00000010382rpa19651.807Gadus_morhua
ENSAPLG00000012442RPA110079.970ENSGALG00000003072RPA19879.970Gallus_gallus
ENSAPLG00000012442RPA19954.911ENSGAFG00000012916rpa19754.613Gambusia_affinis
ENSAPLG00000012442RPA19255.963ENSGAFG00000020953RPA19855.963Gambusia_affinis
ENSAPLG00000012442RPA110053.185ENSGACG00000010856rpa19853.185Gasterosteus_aculeatus
ENSAPLG00000012442RPA110066.372ENSGAGG00000013611RPA19785.856Gopherus_agassizii
ENSAPLG00000012442RPA110063.259ENSGGOG00000014186RPA19863.259Gorilla_gorilla
ENSAPLG00000012442RPA110055.687ENSHBUG00000017773rpa19855.178Haplochromis_burtoni
ENSAPLG00000012442RPA19947.015ENSHBUG00000009348RPA19946.945Haplochromis_burtoni
ENSAPLG00000012442RPA110064.993ENSHGLG00000008846RPA19865.140Heterocephalus_glaber_female
ENSAPLG00000012442RPA110064.993ENSHGLG00100017755-9865.140Heterocephalus_glaber_male
ENSAPLG00000012442RPA19062.129ENSHGLG00100002005-9762.376Heterocephalus_glaber_male
ENSAPLG00000012442RPA110060.561ENSHGLG00100000799-9760.561Heterocephalus_glaber_male
ENSAPLG00000012442RPA18047.904ENSHCOG00000000351RPA18647.647Hippocampus_comes
ENSAPLG00000012442RPA19062.621ENSHCOG00000001401rpa19762.621Hippocampus_comes
ENSAPLG00000012442RPA110053.010ENSIPUG00000004400rpa19853.304Ictalurus_punctatus
ENSAPLG00000012442RPA19960.704ENSSTOG00000022475RPA19860.704Ictidomys_tridecemlineatus
ENSAPLG00000012442RPA19864.804ENSJJAG00000000876Rpa19864.804Jaculus_jaculus
ENSAPLG00000012442RPA19453.041ENSKMAG00000000234RPA19853.041Kryptolebias_marmoratus
ENSAPLG00000012442RPA19063.592ENSKMAG00000005605rpa19751.988Kryptolebias_marmoratus
ENSAPLG00000012442RPA110054.393ENSLBEG00000002281RPA18854.393Labrus_bergylta
ENSAPLG00000012442RPA19954.887ENSLBEG00000021604rpa19654.737Labrus_bergylta
ENSAPLG00000012442RPA18556.743ENSLACG00000007210RPA19956.392Latimeria_chalumnae
ENSAPLG00000012442RPA19462.594ENSLOCG00000006397rpa19857.567Lepisosteus_oculatus
ENSAPLG00000012442RPA110064.723ENSLAFG00000015354RPA19864.723Loxodonta_africana
ENSAPLG00000012442RPA18464.035ENSMFAG00000036138-9964.035Macaca_fascicularis
ENSAPLG00000012442RPA110058.789ENSMMUG00000002442-9758.605Macaca_mulatta
ENSAPLG00000012442RPA110064.697ENSMMUG00000011604-9964.697Macaca_mulatta
ENSAPLG00000012442RPA19864.157ENSMNEG00000031632-9864.157Macaca_nemestrina
ENSAPLG00000012442RPA18962.903ENSMNEG00000029837-9762.903Macaca_nemestrina
ENSAPLG00000012442RPA110060.000ENSMLEG00000038768-9960.000Mandrillus_leucophaeus
ENSAPLG00000012442RPA110053.143ENSMAMG00000020097RPA18853.143Mastacembelus_armatus
ENSAPLG00000012442RPA19953.916ENSMAMG00000017993rpa19952.761Mastacembelus_armatus
ENSAPLG00000012442RPA110050.354ENSMZEG00005024731RPA19850.495Maylandia_zebra
ENSAPLG00000012442RPA110055.982ENSMZEG00005007551rpa19855.473Maylandia_zebra
ENSAPLG00000012442RPA110079.970ENSMGAG00000005315RPA19779.970Meleagris_gallopavo
ENSAPLG00000012442RPA19964.793ENSMAUG00000010474Rpa19964.793Mesocricetus_auratus
ENSAPLG00000012442RPA110065.140ENSMICG00000012867RPA19865.140Microcebus_murinus
ENSAPLG00000012442RPA19964.106ENSMOCG00000013019Rpa19864.106Microtus_ochrogaster
ENSAPLG00000012442RPA110049.555ENSMMOG00000010868RPA19749.555Mola_mola
ENSAPLG00000012442RPA19953.985ENSMMOG00000014292rpa19953.116Mola_mola
ENSAPLG00000012442RPA110067.061ENSMODG00000010549RPA19766.913Monodelphis_domestica
ENSAPLG00000012442RPA19952.964ENSMALG00000001208RPA18453.155Monopterus_albus
ENSAPLG00000012442RPA19953.812ENSMALG00000011453rpa19753.720Monopterus_albus
ENSAPLG00000012442RPA19075.481MGP_CAROLIEiJ_G0016734Rpa19870.025Mus_caroli
ENSAPLG00000012442RPA19962.099ENSMUSG00000000751Rpa19862.099Mus_musculus
ENSAPLG00000012442RPA19963.050MGP_PahariEiJ_G0017871Rpa19863.050Mus_pahari
ENSAPLG00000012442RPA19962.009MGP_SPRETEiJ_G0017577Rpa19862.009Mus_spretus
ENSAPLG00000012442RPA110065.583ENSMPUG00000013119RPA19865.436Mustela_putorius_furo
ENSAPLG00000012442RPA19964.487ENSMLUG00000006113RPA19664.487Myotis_lucifugus
ENSAPLG00000012442RPA19865.309ENSNGAG00000004522Rpa19465.309Nannospalax_galili
ENSAPLG00000012442RPA110049.410ENSNBRG00000009672RPA19649.410Neolamprologus_brichardi
ENSAPLG00000012442RPA19755.130ENSNBRG00000020595rpa19955.283Neolamprologus_brichardi
ENSAPLG00000012442RPA110064.749ENSNLEG00000017149RPA19864.749Nomascus_leucogenys
ENSAPLG00000012442RPA19073.449ENSMEUG00000006714RPA19973.449Notamacropus_eugenii
ENSAPLG00000012442RPA19864.382ENSODEG00000009038RPA19664.083Octodon_degus
ENSAPLG00000012442RPA110055.900ENSONIG00000013135rpa19855.605Oreochromis_niloticus
ENSAPLG00000012442RPA19077.619ENSOANG00000010880RPA19978.095Ornithorhynchus_anatinus
ENSAPLG00000012442RPA110064.074ENSOCUG00000001504RPA19863.932Oryctolagus_cuniculus
ENSAPLG00000012442RPA110048.333ENSORLG00000003368RPA19847.934Oryzias_latipes
ENSAPLG00000012442RPA110053.481ENSORLG00000004856rpa19852.802Oryzias_latipes
ENSAPLG00000012442RPA110047.131ENSORLG00020015284RPA19452.985Oryzias_latipes_hni
ENSAPLG00000012442RPA110053.392ENSORLG00020008980rpa19852.950Oryzias_latipes_hni
ENSAPLG00000012442RPA17552.673ENSORLG00015005867-9852.673Oryzias_latipes_hsok
ENSAPLG00000012442RPA110053.392ENSORLG00015013982rpa19852.950Oryzias_latipes_hsok
ENSAPLG00000012442RPA110048.237ENSORLG00015020383RPA19848.039Oryzias_latipes_hsok
ENSAPLG00000012442RPA110052.515ENSOMEG00000004704rpa19852.367Oryzias_melastigma
ENSAPLG00000012442RPA19257.180ENSOMEG00000011040RPA19957.180Oryzias_melastigma
ENSAPLG00000012442RPA110064.697ENSOGAG00000005581-9864.697Otolemur_garnettii
ENSAPLG00000012442RPA16975.510ENSOGAG00000029379-9775.510Otolemur_garnettii
ENSAPLG00000012442RPA110065.436ENSOARG00000014479RPA19865.288Ovis_aries
ENSAPLG00000012442RPA110064.749ENSPPAG00000039680RPA19864.749Pan_paniscus
ENSAPLG00000012442RPA110065.192ENSPPRG00000011807RPA19765.192Panthera_pardus
ENSAPLG00000012442RPA110065.192ENSPTIG00000007898RPA19765.192Panthera_tigris_altaica
ENSAPLG00000012442RPA110064.749ENSPTRG00000008539RPA19864.749Pan_troglodytes
ENSAPLG00000012442RPA110064.549ENSPANG00000024592RPA19864.549Papio_anubis
ENSAPLG00000012442RPA19551.944ENSPKIG00000008053rpa19252.100Paramormyrops_kingsleyae
ENSAPLG00000012442RPA19484.080ENSPSIG00000015617RPA19984.080Pelodiscus_sinensis
ENSAPLG00000012442RPA19853.869ENSPMGG00000011589rpa19853.718Periophthalmus_magnuspinnatus
ENSAPLG00000012442RPA19647.699ENSPMGG00000000543RPA19947.981Periophthalmus_magnuspinnatus
ENSAPLG00000012442RPA19964.349ENSPEMG00000021061Rpa19864.349Peromyscus_maniculatus_bairdii
ENSAPLG00000012442RPA19077.033ENSPCIG00000019049RPA19774.074Phascolarctos_cinereus
ENSAPLG00000012442RPA19955.572ENSPFOG00000003987rpa19755.572Poecilia_formosa
ENSAPLG00000012442RPA19955.060ENSPLAG00000004984rpa19755.060Poecilia_latipinna
ENSAPLG00000012442RPA18658.523ENSPLAG00000008844-9558.523Poecilia_latipinna
ENSAPLG00000012442RPA19542.920ENSPMEG00000003627-9555.914Poecilia_mexicana
ENSAPLG00000012442RPA19955.572ENSPMEG00000020602rpa19955.382Poecilia_mexicana
ENSAPLG00000012442RPA18067.164ENSPREG00000010174rpa19467.164Poecilia_reticulata
ENSAPLG00000012442RPA18564.400ENSPREG00000010119RPA18264.400Poecilia_reticulata
ENSAPLG00000012442RPA110065.288ENSPCOG00000001799RPA19865.288Propithecus_coquereli
ENSAPLG00000012442RPA110064.106ENSPVAG00000002149RPA19864.106Pteropus_vampyrus
ENSAPLG00000012442RPA110055.835ENSPNYG00000016316rpa19955.385Pundamilia_nyererei
ENSAPLG00000012442RPA110050.071ENSPNYG00000024165RPA19850.212Pundamilia_nyererei
ENSAPLG00000012442RPA19658.853ENSPNAG00000008599rpa19758.505Pygocentrus_nattereri
ENSAPLG00000012442RPA19967.350ENSRNOG00000003123Rpa19967.350Rattus_norvegicus
ENSAPLG00000012442RPA110064.402ENSRBIG00000036587RPA19864.254Rhinopithecus_bieti
ENSAPLG00000012442RPA110060.561ENSRROG00000043278RPA19760.414Rhinopithecus_roxellana
ENSAPLG00000012442RPA19931.563YAR007CRFA19731.556Saccharomyces_cerevisiae
ENSAPLG00000012442RPA110061.947ENSSBOG00000030233RPA19962.094Saimiri_boliviensis_boliviensis
ENSAPLG00000012442RPA19077.033ENSSHAG00000007969RPA19777.033Sarcophilus_harrisii
ENSAPLG00000012442RPA19954.613ENSSFOG00015005362rpa19054.613Scleropages_formosus
ENSAPLG00000012442RPA110045.655ENSSMAG00000019746RPA19846.207Scophthalmus_maximus
ENSAPLG00000012442RPA19955.188ENSSDUG00000011949rpa19654.436Seriola_dumerili
ENSAPLG00000012442RPA110046.720ENSSDUG00000016358RPA18754.019Seriola_dumerili
ENSAPLG00000012442RPA19955.188ENSSLDG00000011806rpa19654.436Seriola_lalandi_dorsalis
ENSAPLG00000012442RPA19946.133ENSSLDG00000020784RPA18254.034Seriola_lalandi_dorsalis
ENSAPLG00000012442RPA17289.655ENSSARG00000007506RPA18189.655Sorex_araneus
ENSAPLG00000012442RPA19966.276ENSSPUG00000007223RPA19966.276Sphenodon_punctatus
ENSAPLG00000012442RPA19950.074ENSSPAG00000011165RPA19750.303Stegastes_partitus
ENSAPLG00000012442RPA19954.286ENSSPAG00000009903rpa19653.985Stegastes_partitus
ENSAPLG00000012442RPA110065.879ENSSSCG00000017822RPA19965.731Sus_scrofa
ENSAPLG00000012442RPA110075.668ENSTGUG00000005775RPA19875.668Taeniopygia_guttata
ENSAPLG00000012442RPA19954.383ENSTRUG00000003616rpa19754.383Takifugu_rubripes
ENSAPLG00000012442RPA19953.479ENSTRUG00000000405RPA17852.444Takifugu_rubripes
ENSAPLG00000012442RPA19954.963ENSTNIG00000016199rpa19854.345Tetraodon_nigroviridis
ENSAPLG00000012442RPA18268.293ENSTBEG00000002709RPA18068.293Tupaia_belangeri
ENSAPLG00000012442RPA110065.879ENSTTRG00000001169RPA19765.879Tursiops_truncatus
ENSAPLG00000012442RPA19088.235ENSUAMG00000015676RPA19788.235Ursus_americanus
ENSAPLG00000012442RPA110065.879ENSUMAG00000009328RPA19865.879Ursus_maritimus
ENSAPLG00000012442RPA110064.845ENSVPAG00000009443RPA19864.845Vicugna_pacos
ENSAPLG00000012442RPA19472.525ENSVVUG00000021715RPA19865.583Vulpes_vulpes
ENSAPLG00000012442RPA110050.740ENSXETG00000013538rpa19761.424Xenopus_tropicalis
ENSAPLG00000012442RPA19553.261ENSXCOG00000010068rpa19453.577Xiphophorus_couchianus
ENSAPLG00000012442RPA18955.505ENSXCOG00000009899-9955.505Xiphophorus_couchianus
ENSAPLG00000012442RPA18664.400ENSXMAG00000010333RPA17964.400Xiphophorus_maculatus
ENSAPLG00000012442RPA19954.532ENSXMAG00000004102rpa19954.829Xiphophorus_maculatus

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