EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAPLG00000012442 (Gene tree)
Gene ID
-
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Anas_platyrhynchos
Status
putative
Strand
Plus strand
Length
22499 bases
Position
chrKB743696.1:513222-535720
Accession
101799316
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPLP00000012275tRNA_anti-codonPF01336.252.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPLT00000013010RPA1-2012948XM_005025034ENSAPLP00000012275674 (aa)-U3IYE9
Gene Model
Click here to download ENSAPLG00000012442's gene model file
Pathways
Pathway IDPathway NameSource
apla03030DNA replicationKEGG
apla03420Nucleotide excision repairKEGG
apla03430Mismatch repairKEGG
apla03440Homologous recombinationKEGG
apla03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000012442's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPLG00000012442RPA19254.054ENSAPOG00000019409RPA18554.054Acanthochromis_polyacanthus
ENSAPLG00000012442RPA19954.505ENSAPOG00000011658rpa19953.221Acanthochromis_polyacanthus
ENSAPLG00000012442RPA110065.929ENSAMEG00000007706RPA19765.929Ailuropoda_melanoleuca
ENSAPLG00000012442RPA19849.849ENSACIG00000007277rpa19949.170Amphilophus_citrinellus
ENSAPLG00000012442RPA19850.000ENSACIG00000012881RPA19950.000Amphilophus_citrinellus
ENSAPLG00000012442RPA19954.978ENSAOCG00000023376rpa19954.294Amphiprion_ocellaris
ENSAPLG00000012442RPA110047.966ENSAOCG00000009003RPA19847.966Amphiprion_ocellaris
ENSAPLG00000012442RPA110047.397ENSAPEG00000019132RPA19053.714Amphiprion_percula
ENSAPLG00000012442RPA19954.829ENSAPEG00000008634rpa19954.141Amphiprion_percula
ENSAPLG00000012442RPA19754.504ENSATEG00000022024rpa19954.504Anabas_testudineus
ENSAPLG00000012442RPA110049.441ENSATEG00000006443RPA19849.022Anabas_testudineus
ENSAPLG00000012442RPA19071.464ENSACAG00000014490RPA19755.718Anolis_carolinensis
ENSAPLG00000012442RPA110064.697ENSANAG00000023456RPA19964.697Aotus_nancymaae
ENSAPLG00000012442RPA19654.938ENSACLG00000006640rpa19955.401Astatotilapia_calliptera
ENSAPLG00000012442RPA110050.354ENSACLG00000005223RPA19850.495Astatotilapia_calliptera
ENSAPLG00000012442RPA19857.855ENSAMXG00000008418rpa19853.412Astyanax_mexicanus
ENSAPLG00000012442RPA110065.583ENSBTAG00000009711RPA19865.436Bos_taurus
ENSAPLG00000012442RPA17530.820WBGene00017546rpa-17231.271Caenorhabditis_elegans
ENSAPLG00000012442RPA110065.044ENSCJAG00000001848RPA19865.192Callithrix_jacchus
ENSAPLG00000012442RPA19472.772ENSCAFG00000019249RPA19865.583Canis_familiaris
ENSAPLG00000012442RPA19472.772ENSCAFG00020009847RPA19865.583Canis_lupus_dingo
ENSAPLG00000012442RPA110065.583ENSCHIG00000026308RPA19865.436Capra_hircus
ENSAPLG00000012442RPA110065.929ENSTSYG00000003482-9865.487Carlito_syrichta
ENSAPLG00000012442RPA110059.823ENSCPOG00000000035RPA19859.823Cavia_porcellus
ENSAPLG00000012442RPA19268.868ENSCCAG00000010981RPA19768.868Cebus_capucinus
ENSAPLG00000012442RPA110061.595ENSCLAG00000015045-9761.595Chinchilla_lanigera
ENSAPLG00000012442RPA110065.288ENSCLAG00000005185-9865.288Chinchilla_lanigera
ENSAPLG00000012442RPA19268.868ENSCSAG00000013833RPA19768.868Chlorocebus_sabaeus
ENSAPLG00000012442RPA17666.602ENSCHOG00000009454-9966.602Choloepus_hoffmanni
ENSAPLG00000012442RPA19863.444ENSCHOG00000013540-9963.444Choloepus_hoffmanni
ENSAPLG00000012442RPA110063.864ENSCPBG00000020377RPA19986.253Chrysemys_picta_bellii
ENSAPLG00000012442RPA19938.201ENSCING00000023482-9737.977Ciona_intestinalis
ENSAPLG00000012442RPA110062.963ENSCANG00000030911RPA19962.963Colobus_angolensis_palliatus
ENSAPLG00000012442RPA19964.317ENSCGRG00001008197Rpa19864.317Cricetulus_griseus_chok1gshd
ENSAPLG00000012442RPA18562.093ENSCGRG00000000582Rpa19962.093Cricetulus_griseus_crigri
ENSAPLG00000012442RPA110051.173ENSCSEG00000013066rpa19850.735Cynoglossus_semilaevis
ENSAPLG00000012442RPA19946.965ENSCSEG00000012726RPA19847.344Cynoglossus_semilaevis
ENSAPLG00000012442RPA19954.720ENSCVAG00000019431rpa19954.334Cyprinodon_variegatus
ENSAPLG00000012442RPA19546.373ENSCVAG00000013446-9346.373Cyprinodon_variegatus
ENSAPLG00000012442RPA19857.357ENSDARG00000003938rpa19857.357Danio_rerio
ENSAPLG00000012442RPA110064.993ENSDNOG00000017218RPA19864.993Dasypus_novemcinctus
ENSAPLG00000012442RPA19472.030ENSDORG00000006199Rpa19771.756Dipodomys_ordii
ENSAPLG00000012442RPA19935.303FBgn0010173RpA-709635.894Drosophila_melanogaster
ENSAPLG00000012442RPA17471.154ENSETEG00000017608RPA18071.154Echinops_telfairi
ENSAPLG00000012442RPA110066.765ENSEASG00005009372RPA19966.913Equus_asinus_asinus
ENSAPLG00000012442RPA110063.220ENSECAG00000023886RPA19866.322Equus_caballus
ENSAPLG00000012442RPA17365.112ENSEEUG00000002186-6865.112Erinaceus_europaeus
ENSAPLG00000012442RPA19064.904ENSELUG00000021071rpa19853.835Esox_lucius
ENSAPLG00000012442RPA19148.232ENSELUG00000006136RPA19948.232Esox_lucius
ENSAPLG00000012442RPA110065.487ENSFCAG00000006306RPA19765.487Felis_catus
ENSAPLG00000012442RPA110075.668ENSFALG00000006575RPA19875.519Ficedula_albicollis
ENSAPLG00000012442RPA110065.140ENSFDAG00000007720RPA19864.993Fukomys_damarensis
ENSAPLG00000012442RPA19065.049ENSFHEG00000003580rpa19865.049Fundulus_heteroclitus
ENSAPLG00000012442RPA19952.259ENSGMOG00000010382rpa19651.807Gadus_morhua
ENSAPLG00000012442RPA110079.970ENSGALG00000003072RPA19879.970Gallus_gallus
ENSAPLG00000012442RPA19954.911ENSGAFG00000012916rpa19754.613Gambusia_affinis
ENSAPLG00000012442RPA19255.963ENSGAFG00000020953RPA19855.963Gambusia_affinis
ENSAPLG00000012442RPA110053.185ENSGACG00000010856rpa19853.185Gasterosteus_aculeatus
ENSAPLG00000012442RPA110066.372ENSGAGG00000013611RPA19785.856Gopherus_agassizii
ENSAPLG00000012442RPA110063.259ENSGGOG00000014186RPA19863.259Gorilla_gorilla
ENSAPLG00000012442RPA110055.687ENSHBUG00000017773rpa19855.178Haplochromis_burtoni
ENSAPLG00000012442RPA19947.015ENSHBUG00000009348RPA19946.945Haplochromis_burtoni
ENSAPLG00000012442RPA110064.993ENSHGLG00000008846RPA19865.140Heterocephalus_glaber_female
ENSAPLG00000012442RPA110064.993ENSHGLG00100017755-9865.140Heterocephalus_glaber_male
ENSAPLG00000012442RPA19062.129ENSHGLG00100002005-9762.376Heterocephalus_glaber_male
ENSAPLG00000012442RPA110060.561ENSHGLG00100000799-9760.561Heterocephalus_glaber_male
ENSAPLG00000012442RPA18047.904ENSHCOG00000000351RPA18647.647Hippocampus_comes
ENSAPLG00000012442RPA19062.621ENSHCOG00000001401rpa19762.621Hippocampus_comes
ENSAPLG00000012442RPA110053.010ENSIPUG00000004400rpa19853.304Ictalurus_punctatus
ENSAPLG00000012442RPA19960.704ENSSTOG00000022475RPA19860.704Ictidomys_tridecemlineatus
ENSAPLG00000012442RPA19864.804ENSJJAG00000000876Rpa19864.804Jaculus_jaculus
ENSAPLG00000012442RPA19453.041ENSKMAG00000000234RPA19853.041Kryptolebias_marmoratus
ENSAPLG00000012442RPA19063.592ENSKMAG00000005605rpa19751.988Kryptolebias_marmoratus
ENSAPLG00000012442RPA110054.393ENSLBEG00000002281RPA18854.393Labrus_bergylta
ENSAPLG00000012442RPA19954.887ENSLBEG00000021604rpa19654.737Labrus_bergylta
ENSAPLG00000012442RPA18556.743ENSLACG00000007210RPA19956.392Latimeria_chalumnae
ENSAPLG00000012442RPA19462.594ENSLOCG00000006397rpa19857.567Lepisosteus_oculatus
ENSAPLG00000012442RPA110064.723ENSLAFG00000015354RPA19864.723Loxodonta_africana
ENSAPLG00000012442RPA18464.035ENSMFAG00000036138-9964.035Macaca_fascicularis
ENSAPLG00000012442RPA110058.789ENSMMUG00000002442-9758.605Macaca_mulatta
ENSAPLG00000012442RPA110064.697ENSMMUG00000011604-9964.697Macaca_mulatta
ENSAPLG00000012442RPA19864.157ENSMNEG00000031632-9864.157Macaca_nemestrina
ENSAPLG00000012442RPA18962.903ENSMNEG00000029837-9762.903Macaca_nemestrina
ENSAPLG00000012442RPA110060.000ENSMLEG00000038768-9960.000Mandrillus_leucophaeus
ENSAPLG00000012442RPA110053.143ENSMAMG00000020097RPA18853.143Mastacembelus_armatus
ENSAPLG00000012442RPA19953.916ENSMAMG00000017993rpa19952.761Mastacembelus_armatus
ENSAPLG00000012442RPA110050.354ENSMZEG00005024731RPA19850.495Maylandia_zebra
ENSAPLG00000012442RPA110055.982ENSMZEG00005007551rpa19855.473Maylandia_zebra
ENSAPLG00000012442RPA110079.970ENSMGAG00000005315RPA19779.970Meleagris_gallopavo
ENSAPLG00000012442RPA19964.793ENSMAUG00000010474Rpa19964.793Mesocricetus_auratus
ENSAPLG00000012442RPA110065.140ENSMICG00000012867RPA19865.140Microcebus_murinus
ENSAPLG00000012442RPA19964.106ENSMOCG00000013019Rpa19864.106Microtus_ochrogaster
ENSAPLG00000012442RPA110049.555ENSMMOG00000010868RPA19749.555Mola_mola
ENSAPLG00000012442RPA19953.985ENSMMOG00000014292rpa19953.116Mola_mola
ENSAPLG00000012442RPA110067.061ENSMODG00000010549RPA19766.913Monodelphis_domestica
ENSAPLG00000012442RPA19952.964ENSMALG00000001208RPA18453.155Monopterus_albus
ENSAPLG00000012442RPA19953.812ENSMALG00000011453rpa19753.720Monopterus_albus
ENSAPLG00000012442RPA19075.481MGP_CAROLIEiJ_G0016734Rpa19870.025Mus_caroli
ENSAPLG00000012442RPA19962.099ENSMUSG00000000751Rpa19862.099Mus_musculus
ENSAPLG00000012442RPA19963.050MGP_PahariEiJ_G0017871Rpa19863.050Mus_pahari
ENSAPLG00000012442RPA19962.009MGP_SPRETEiJ_G0017577Rpa19862.009Mus_spretus
ENSAPLG00000012442RPA110065.583ENSMPUG00000013119RPA19865.436Mustela_putorius_furo
ENSAPLG00000012442RPA19964.487ENSMLUG00000006113RPA19664.487Myotis_lucifugus
ENSAPLG00000012442RPA19865.309ENSNGAG00000004522Rpa19465.309Nannospalax_galili
ENSAPLG00000012442RPA110049.410ENSNBRG00000009672RPA19649.410Neolamprologus_brichardi
ENSAPLG00000012442RPA19755.130ENSNBRG00000020595rpa19955.283Neolamprologus_brichardi
ENSAPLG00000012442RPA110064.749ENSNLEG00000017149RPA19864.749Nomascus_leucogenys
ENSAPLG00000012442RPA19073.449ENSMEUG00000006714RPA19973.449Notamacropus_eugenii
ENSAPLG00000012442RPA19864.382ENSODEG00000009038RPA19664.083Octodon_degus
ENSAPLG00000012442RPA110055.900ENSONIG00000013135rpa19855.605Oreochromis_niloticus
ENSAPLG00000012442RPA19077.619ENSOANG00000010880RPA19978.095Ornithorhynchus_anatinus
ENSAPLG00000012442RPA110064.074ENSOCUG00000001504RPA19863.932Oryctolagus_cuniculus
ENSAPLG00000012442RPA110048.333ENSORLG00000003368RPA19847.934Oryzias_latipes
ENSAPLG00000012442RPA110053.481ENSORLG00000004856rpa19852.802Oryzias_latipes
ENSAPLG00000012442RPA110047.131ENSORLG00020015284RPA19452.985Oryzias_latipes_hni
ENSAPLG00000012442RPA110053.392ENSORLG00020008980rpa19852.950Oryzias_latipes_hni
ENSAPLG00000012442RPA17552.673ENSORLG00015005867-9852.673Oryzias_latipes_hsok
ENSAPLG00000012442RPA110053.392ENSORLG00015013982rpa19852.950Oryzias_latipes_hsok
ENSAPLG00000012442RPA110048.237ENSORLG00015020383RPA19848.039Oryzias_latipes_hsok
ENSAPLG00000012442RPA110052.515ENSOMEG00000004704rpa19852.367Oryzias_melastigma
ENSAPLG00000012442RPA19257.180ENSOMEG00000011040RPA19957.180Oryzias_melastigma
ENSAPLG00000012442RPA110064.697ENSOGAG00000005581-9864.697Otolemur_garnettii
ENSAPLG00000012442RPA16975.510ENSOGAG00000029379-9775.510Otolemur_garnettii
ENSAPLG00000012442RPA110065.436ENSOARG00000014479RPA19865.288Ovis_aries
ENSAPLG00000012442RPA110064.749ENSPPAG00000039680RPA19864.749Pan_paniscus
ENSAPLG00000012442RPA110065.192ENSPPRG00000011807RPA19765.192Panthera_pardus
ENSAPLG00000012442RPA110065.192ENSPTIG00000007898RPA19765.192Panthera_tigris_altaica
ENSAPLG00000012442RPA110064.749ENSPTRG00000008539RPA19864.749Pan_troglodytes
ENSAPLG00000012442RPA110064.549ENSPANG00000024592RPA19864.549Papio_anubis
ENSAPLG00000012442RPA19551.944ENSPKIG00000008053rpa19252.100Paramormyrops_kingsleyae
ENSAPLG00000012442RPA19484.080ENSPSIG00000015617RPA19984.080Pelodiscus_sinensis
ENSAPLG00000012442RPA19853.869ENSPMGG00000011589rpa19853.718Periophthalmus_magnuspinnatus
ENSAPLG00000012442RPA19647.699ENSPMGG00000000543RPA19947.981Periophthalmus_magnuspinnatus
ENSAPLG00000012442RPA19964.349ENSPEMG00000021061Rpa19864.349Peromyscus_maniculatus_bairdii
ENSAPLG00000012442RPA19077.033ENSPCIG00000019049RPA19774.074Phascolarctos_cinereus
ENSAPLG00000012442RPA19955.572ENSPFOG00000003987rpa19755.572Poecilia_formosa
ENSAPLG00000012442RPA19955.060ENSPLAG00000004984rpa19755.060Poecilia_latipinna
ENSAPLG00000012442RPA18658.523ENSPLAG00000008844-9558.523Poecilia_latipinna
ENSAPLG00000012442RPA19542.920ENSPMEG00000003627-9555.914Poecilia_mexicana
ENSAPLG00000012442RPA19955.572ENSPMEG00000020602rpa19955.382Poecilia_mexicana
ENSAPLG00000012442RPA18067.164ENSPREG00000010174rpa19467.164Poecilia_reticulata
ENSAPLG00000012442RPA18564.400ENSPREG00000010119RPA18264.400Poecilia_reticulata
ENSAPLG00000012442RPA110065.288ENSPCOG00000001799RPA19865.288Propithecus_coquereli
ENSAPLG00000012442RPA110064.106ENSPVAG00000002149RPA19864.106Pteropus_vampyrus
ENSAPLG00000012442RPA110055.835ENSPNYG00000016316rpa19955.385Pundamilia_nyererei
ENSAPLG00000012442RPA110050.071ENSPNYG00000024165RPA19850.212Pundamilia_nyererei
ENSAPLG00000012442RPA19658.853ENSPNAG00000008599rpa19758.505Pygocentrus_nattereri
ENSAPLG00000012442RPA19967.350ENSRNOG00000003123Rpa19967.350Rattus_norvegicus
ENSAPLG00000012442RPA110064.402ENSRBIG00000036587RPA19864.254Rhinopithecus_bieti
ENSAPLG00000012442RPA110060.561ENSRROG00000043278RPA19760.414Rhinopithecus_roxellana
ENSAPLG00000012442RPA19931.563YAR007CRFA19731.556Saccharomyces_cerevisiae
ENSAPLG00000012442RPA110061.947ENSSBOG00000030233RPA19962.094Saimiri_boliviensis_boliviensis
ENSAPLG00000012442RPA19077.033ENSSHAG00000007969RPA19777.033Sarcophilus_harrisii
ENSAPLG00000012442RPA19954.613ENSSFOG00015005362rpa19054.613Scleropages_formosus
ENSAPLG00000012442RPA110045.655ENSSMAG00000019746RPA19846.207Scophthalmus_maximus
ENSAPLG00000012442RPA19955.188ENSSDUG00000011949rpa19654.436Seriola_dumerili
ENSAPLG00000012442RPA110046.720ENSSDUG00000016358RPA18754.019Seriola_dumerili
ENSAPLG00000012442RPA19955.188ENSSLDG00000011806rpa19654.436Seriola_lalandi_dorsalis
ENSAPLG00000012442RPA19946.133ENSSLDG00000020784RPA18254.034Seriola_lalandi_dorsalis
ENSAPLG00000012442RPA17289.655ENSSARG00000007506RPA18189.655Sorex_araneus
ENSAPLG00000012442RPA19966.276ENSSPUG00000007223RPA19966.276Sphenodon_punctatus
ENSAPLG00000012442RPA19950.074ENSSPAG00000011165RPA19750.303Stegastes_partitus
ENSAPLG00000012442RPA19954.286ENSSPAG00000009903rpa19653.985Stegastes_partitus
ENSAPLG00000012442RPA110065.879ENSSSCG00000017822RPA19965.731Sus_scrofa
ENSAPLG00000012442RPA110075.668ENSTGUG00000005775RPA19875.668Taeniopygia_guttata
ENSAPLG00000012442RPA19954.383ENSTRUG00000003616rpa19754.383Takifugu_rubripes
ENSAPLG00000012442RPA19953.479ENSTRUG00000000405RPA17852.444Takifugu_rubripes
ENSAPLG00000012442RPA19954.963ENSTNIG00000016199rpa19854.345Tetraodon_nigroviridis
ENSAPLG00000012442RPA18268.293ENSTBEG00000002709RPA18068.293Tupaia_belangeri
ENSAPLG00000012442RPA110065.879ENSTTRG00000001169RPA19765.879Tursiops_truncatus
ENSAPLG00000012442RPA19088.235ENSUAMG00000015676RPA19788.235Ursus_americanus
ENSAPLG00000012442RPA110065.879ENSUMAG00000009328RPA19865.879Ursus_maritimus
ENSAPLG00000012442RPA110064.845ENSVPAG00000009443RPA19864.845Vicugna_pacos
ENSAPLG00000012442RPA19472.525ENSVVUG00000021715RPA19865.583Vulpes_vulpes
ENSAPLG00000012442RPA110050.740ENSXETG00000013538rpa19761.424Xenopus_tropicalis
ENSAPLG00000012442RPA19553.261ENSXCOG00000010068rpa19453.577Xiphophorus_couchianus
ENSAPLG00000012442RPA18955.505ENSXCOG00000009899-9955.505Xiphophorus_couchianus
ENSAPLG00000012442RPA18664.400ENSXMAG00000010333RPA17964.400Xiphophorus_maculatus
ENSAPLG00000012442RPA19954.532ENSXMAG00000004102rpa19954.829Xiphophorus_maculatus

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