EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000012618 (Gene tree)
Gene ID: -
Gene Symbol: SPEN
Alias: -
Full Name: spen family transcriptional repressor
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 47962 bases
Position: chrKB742616.1:727283-775244
Accession: 101792876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000012411	RRM_5	PF13893.6	1.1e-06	1	1
ENSAPLP00000012411	RRM_1	PF00076.22	9.2e-34	1	2
ENSAPLP00000012411	RRM_1	PF00076.22	9.2e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013149	SPEN-201	10701	XM_005012602	ENSAPLP00000012411	3566 (aa)	-	U3IYT5

Gene Model

Click here to download ENSAPLG00000012618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000012618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000012618	SPEN	90	84.211	ENSAPOG00000011411	si:ch1073-335m2.2	99	84.211	Acanthochromis_polyacanthus
ENSAPLG00000012618	SPEN	99	78.146	ENSAPOG00000009853	-	81	71.849	Acanthochromis_polyacanthus
ENSAPLG00000012618	SPEN	99	78.146	ENSAOCG00000014505	-	99	47.604	Amphiprion_ocellaris
ENSAPLG00000012618	SPEN	99	78.146	ENSAPEG00000010288	-	99	47.539	Amphiprion_percula
ENSAPLG00000012618	SPEN	98	66.667	ENSAPEG00000013515	si:ch1073-335m2.2	99	66.667	Amphiprion_percula
ENSAPLG00000012618	SPEN	99	79.470	ENSATEG00000005627	-	99	47.523	Anabas_testudineus
ENSAPLG00000012618	SPEN	79	81.111	ENSATEG00000007674	si:ch1073-335m2.2	83	81.111	Anabas_testudineus
ENSAPLG00000012618	SPEN	100	71.413	ENSACAG00000013761	SPEN	100	71.675	Anolis_carolinensis
ENSAPLG00000012618	SPEN	99	78.146	ENSACLG00000016922	-	100	46.379	Astatotilapia_calliptera
ENSAPLG00000012618	SPEN	99	80.263	ENSAMXG00000012485	spen	99	48.700	Astyanax_mexicanus
ENSAPLG00000012618	SPEN	100	71.051	ENSBTAG00000018729	SPEN	97	70.765	Bos_taurus
ENSAPLG00000012618	SPEN	100	71.615	ENSCJAG00000008527	SPEN	96	71.652	Callithrix_jacchus
ENSAPLG00000012618	SPEN	85	79.507	ENSCAFG00000016132	-	92	79.455	Canis_familiaris
ENSAPLG00000012618	SPEN	100	66.575	ENSCAPG00000013803	SPEN	100	66.968	Cavia_aperea
ENSAPLG00000012618	SPEN	99	65.202	ENSCPOG00000014036	SPEN	100	65.678	Cavia_porcellus
ENSAPLG00000012618	SPEN	100	65.088	ENSCCAG00000020258	SPEN	96	67.825	Cebus_capucinus
ENSAPLG00000012618	SPEN	70	99.074	ENSCATG00000015079	SPEN	70	98.165	Cercocebus_atys
ENSAPLG00000012618	SPEN	99	66.336	ENSCLAG00000002018	SPEN	100	66.337	Chinchilla_lanigera
ENSAPLG00000012618	SPEN	75	71.631	ENSCSAG00000000841	SPEN	72	71.742	Chlorocebus_sabaeus
ENSAPLG00000012618	SPEN	100	86.537	ENSCPBG00000010477	SPEN	99	86.565	Chrysemys_picta_bellii
ENSAPLG00000012618	SPEN	100	70.019	ENSCANG00000034547	SPEN	96	70.019	Colobus_angolensis_palliatus
ENSAPLG00000012618	SPEN	99	63.330	ENSCGRG00001007725	Spen	99	63.178	Cricetulus_griseus_chok1gshd
ENSAPLG00000012618	SPEN	99	62.675	ENSCGRG00000010581	Spen	100	62.396	Cricetulus_griseus_crigri
ENSAPLG00000012618	SPEN	99	81.457	ENSCSEG00000003915	-	97	52.008	Cynoglossus_semilaevis
ENSAPLG00000012618	SPEN	95	83.721	ENSCVAG00000016346	-	95	55.111	Cyprinodon_variegatus
ENSAPLG00000012618	SPEN	70	82.184	ENSDARG00000074332	si:ch1073-335m2.2	53	78.307	Danio_rerio
ENSAPLG00000012618	SPEN	100	47.222	ENSDARG00000074245	spen	80	86.111	Danio_rerio
ENSAPLG00000012618	SPEN	100	71.748	ENSDNOG00000041948	SPEN	96	71.785	Dasypus_novemcinctus
ENSAPLG00000012618	SPEN	99	64.168	ENSDORG00000023909	Spen	100	64.294	Dipodomys_ordii
ENSAPLG00000012618	SPEN	69	96.624	ENSETEG00000016692	-	67	93.893	Echinops_telfairi
ENSAPLG00000012618	SPEN	69	95.349	ENSEEUG00000010255	SPEN	75	95.349	Erinaceus_europaeus
ENSAPLG00000012618	SPEN	90	84.000	ENSELUG00000007726	si:ch1073-335m2.2	99	84.483	Esox_lucius
ENSAPLG00000012618	SPEN	89	90.966	ENSFALG00000003551	SPEN	100	90.966	Ficedula_albicollis
ENSAPLG00000012618	SPEN	69	81.006	ENSGMOG00000008156	si:ch1073-335m2.2	98	81.006	Gadus_morhua
ENSAPLG00000012618	SPEN	100	43.725	ENSGMOG00000008397	-	93	53.506	Gadus_morhua
ENSAPLG00000012618	SPEN	100	93.540	ENSGALG00000036932	SPEN	98	93.568	Gallus_gallus
ENSAPLG00000012618	SPEN	100	46.405	ENSGAFG00000015819	-	80	71.008	Gambusia_affinis
ENSAPLG00000012618	SPEN	58	84.615	ENSGAFG00000021570	si:ch1073-335m2.2	95	84.615	Gambusia_affinis
ENSAPLG00000012618	SPEN	100	47.038	ENSGACG00000005341	-	99	47.042	Gasterosteus_aculeatus
ENSAPLG00000012618	SPEN	95	80.000	ENSGACG00000001176	si:ch1073-335m2.2	96	80.000	Gasterosteus_aculeatus
ENSAPLG00000012618	SPEN	99	96.502	ENSGAGG00000020785	SPEN	99	96.502	Gopherus_agassizii
ENSAPLG00000012618	SPEN	100	71.577	ENSGGOG00000012041	SPEN	96	71.540	Gorilla_gorilla
ENSAPLG00000012618	SPEN	78	83.626	ENSHBUG00000023253	si:ch1073-335m2.2	86	83.626	Haplochromis_burtoni
ENSAPLG00000012618	SPEN	99	78.146	ENSHBUG00000020626	-	99	46.558	Haplochromis_burtoni
ENSAPLG00000012618	SPEN	84	74.046	ENSHGLG00000019259	SPEN	73	82.689	Heterocephalus_glaber_female
ENSAPLG00000012618	SPEN	77	74.864	ENSHGLG00100019294	SPEN	88	68.967	Heterocephalus_glaber_male
ENSAPLG00000012618	SPEN	93	67.647	ENSHCOG00000006004	si:ch1073-335m2.2	99	67.647	Hippocampus_comes
ENSAPLG00000012618	SPEN	84	78.161	ENSIPUG00000018212	si:ch1073-335m2.2	93	78.161	Ictalurus_punctatus
ENSAPLG00000012618	SPEN	99	79.739	ENSIPUG00000021668	spen	98	78.846	Ictalurus_punctatus
ENSAPLG00000012618	SPEN	99	77.483	ENSKMAG00000003882	-	92	55.962	Kryptolebias_marmoratus
ENSAPLG00000012618	SPEN	95	84.211	ENSKMAG00000021725	si:ch1073-335m2.2	99	84.211	Kryptolebias_marmoratus
ENSAPLG00000012618	SPEN	91	81.065	ENSLBEG00000020855	si:ch1073-335m2.2	99	81.065	Labrus_bergylta
ENSAPLG00000012618	SPEN	86	42.866	ENSLBEG00000019129	-	100	42.438	Labrus_bergylta
ENSAPLG00000012618	SPEN	97	80.000	ENSLACG00000003258	SPEN	99	80.000	Latimeria_chalumnae
ENSAPLG00000012618	SPEN	100	57.316	ENSLOCG00000007896	si:ch1073-335m2.2	99	57.459	Lepisosteus_oculatus
ENSAPLG00000012618	SPEN	100	70.970	ENSLAFG00000004524	SPEN	99	70.536	Loxodonta_africana
ENSAPLG00000012618	SPEN	75	71.434	ENSMFAG00000041974	SPEN	71	71.546	Macaca_fascicularis
ENSAPLG00000012618	SPEN	75	71.434	ENSMMUG00000008026	SPEN	72	71.546	Macaca_mulatta
ENSAPLG00000012618	SPEN	75	71.546	ENSMNEG00000042402	SPEN	71	71.657	Macaca_nemestrina
ENSAPLG00000012618	SPEN	75	71.471	ENSMLEG00000039293	SPEN	72	71.583	Mandrillus_leucophaeus
ENSAPLG00000012618	SPEN	98	64.113	ENSMAMG00000023870	si:ch1073-335m2.2	99	64.113	Mastacembelus_armatus
ENSAPLG00000012618	SPEN	91	45.207	ENSMZEG00005021491	-	99	45.150	Maylandia_zebra
ENSAPLG00000012618	SPEN	97	73.555	ENSMAUG00000008318	Spen	99	72.879	Mesocricetus_auratus
ENSAPLG00000012618	SPEN	100	71.402	ENSMICG00000030994	SPEN	96	71.551	Microcebus_murinus
ENSAPLG00000012618	SPEN	100	74.910	ENSMODG00000003411	SPEN	99	74.751	Monodelphis_domestica
ENSAPLG00000012618	SPEN	99	78.808	ENSMALG00000008625	-	99	47.031	Monopterus_albus
ENSAPLG00000012618	SPEN	99	66.071	MGP_CAROLIEiJ_G0026745	Spen	97	66.109	Mus_caroli
ENSAPLG00000012618	SPEN	100	65.602	ENSMUSG00000040761	Spen	97	65.503	Mus_musculus
ENSAPLG00000012618	SPEN	100	65.871	MGP_PahariEiJ_G0029076	Spen	97	65.747	Mus_pahari
ENSAPLG00000012618	SPEN	100	65.899	MGP_SPRETEiJ_G0027724	Spen	97	65.726	Mus_spretus
ENSAPLG00000012618	SPEN	92	94.624	ENSMLUG00000010144	SPEN	98	91.412	Myotis_lucifugus
ENSAPLG00000012618	SPEN	98	72.771	ENSNGAG00000000641	Spen	99	72.609	Nannospalax_galili
ENSAPLG00000012618	SPEN	87	83.626	ENSNBRG00000005733	si:ch1073-335m2.2	70	83.626	Neolamprologus_brichardi
ENSAPLG00000012618	SPEN	87	43.109	ENSNBRG00000022090	-	100	43.027	Neolamprologus_brichardi
ENSAPLG00000012618	SPEN	90	92.708	ENSMEUG00000002422	SPEN	91	92.708	Notamacropus_eugenii
ENSAPLG00000012618	SPEN	85	81.444	ENSOPRG00000015800	SPEN	82	81.261	Ochotona_princeps
ENSAPLG00000012618	SPEN	100	66.345	ENSODEG00000016644	SPEN	99	66.187	Octodon_degus
ENSAPLG00000012618	SPEN	100	48.014	ENSONIG00000006573	-	95	80.000	Oreochromis_niloticus
ENSAPLG00000012618	SPEN	92	82.456	ENSORLG00000018414	si:ch1073-335m2.2	91	65.992	Oryzias_latipes
ENSAPLG00000012618	SPEN	99	75.253	ENSORLG00015022085	-	51	75.253	Oryzias_latipes_hsok
ENSAPLG00000012618	SPEN	92	81.871	ENSORLG00015005537	si:ch1073-335m2.2	80	56.098	Oryzias_latipes_hsok
ENSAPLG00000012618	SPEN	93	65.854	ENSOMEG00000004509	si:ch1073-335m2.2	98	67.373	Oryzias_melastigma
ENSAPLG00000012618	SPEN	50	75.243	ENSOMEG00000007639	-	51	75.243	Oryzias_melastigma
ENSAPLG00000012618	SPEN	75	71.689	ENSPTRG00000000210	SPEN	72	71.652	Pan_troglodytes
ENSAPLG00000012618	SPEN	75	70.466	ENSPANG00000006293	SPEN	72	70.577	Papio_anubis
ENSAPLG00000012618	SPEN	100	50.224	ENSPKIG00000002617	SPEN	81	79.339	Paramormyrops_kingsleyae
ENSAPLG00000012618	SPEN	100	53.181	ENSPKIG00000010492	si:ch1073-335m2.2	99	52.199	Paramormyrops_kingsleyae
ENSAPLG00000012618	SPEN	100	84.543	ENSPSIG00000008026	SPEN	100	84.543	Pelodiscus_sinensis
ENSAPLG00000012618	SPEN	84	85.799	ENSPFOG00000017986	si:ch1073-335m2.2	93	85.799	Poecilia_formosa
ENSAPLG00000012618	SPEN	90	85.799	ENSPLAG00000016625	si:ch1073-335m2.2	93	85.799	Poecilia_latipinna
ENSAPLG00000012618	SPEN	84	85.799	ENSPMEG00000002674	si:ch1073-335m2.2	93	85.799	Poecilia_mexicana
ENSAPLG00000012618	SPEN	100	46.245	ENSPMEG00000006764	-	80	71.008	Poecilia_mexicana
ENSAPLG00000012618	SPEN	90	85.799	ENSPREG00000005357	si:ch1073-335m2.2	93	85.799	Poecilia_reticulata
ENSAPLG00000012618	SPEN	100	46.255	ENSPREG00000010399	-	80	71.008	Poecilia_reticulata
ENSAPLG00000012618	SPEN	80	76.868	ENSPCAG00000009543	SPEN	80	72.327	Procavia_capensis
ENSAPLG00000012618	SPEN	100	70.290	ENSPCOG00000021735	SPEN	96	70.328	Propithecus_coquereli
ENSAPLG00000012618	SPEN	83	84.156	ENSPVAG00000013794	SPEN	81	83.921	Pteropus_vampyrus
ENSAPLG00000012618	SPEN	91	51.429	ENSPNYG00000009042	si:ch1073-335m2.2	71	51.756	Pundamilia_nyererei
ENSAPLG00000012618	SPEN	99	78.146	ENSPNYG00000012379	-	99	46.918	Pundamilia_nyererei
ENSAPLG00000012618	SPEN	99	81.333	ENSPNAG00000020795	spen	77	75.314	Pygocentrus_nattereri
ENSAPLG00000012618	SPEN	95	81.609	ENSPNAG00000011452	si:ch1073-335m2.2	99	81.609	Pygocentrus_nattereri
ENSAPLG00000012618	SPEN	75	71.732	ENSRBIG00000039654	SPEN	81	71.256	Rhinopithecus_bieti
ENSAPLG00000012618	SPEN	75	71.742	ENSRROG00000035686	SPEN	72	71.705	Rhinopithecus_roxellana
ENSAPLG00000012618	SPEN	100	75.194	ENSSHAG00000004960	SPEN	98	94.656	Sarcophilus_harrisii
ENSAPLG00000012618	SPEN	88	64.815	ENSSFOG00015007131	si:ch1073-335m2.2	96	64.815	Scleropages_formosus
ENSAPLG00000012618	SPEN	95	91.279	ENSSFOG00015010267	si:ch1073-335m2.2	97	91.279	Scleropages_formosus
ENSAPLG00000012618	SPEN	99	78.808	ENSSMAG00000008996	-	99	46.945	Scophthalmus_maximus
ENSAPLG00000012618	SPEN	99	79.470	ENSSDUG00000003476	-	81	72.917	Seriola_dumerili
ENSAPLG00000012618	SPEN	96	84.211	ENSSDUG00000008416	si:ch1073-335m2.2	52	64.822	Seriola_dumerili
ENSAPLG00000012618	SPEN	99	79.470	ENSSLDG00000012950	-	81	72.917	Seriola_lalandi_dorsalis
ENSAPLG00000012618	SPEN	97	65.726	ENSSLDG00000023347	si:ch1073-335m2.2	91	65.726	Seriola_lalandi_dorsalis
ENSAPLG00000012618	SPEN	89	97.222	ENSSPUG00000001866	-	100	83.219	Sphenodon_punctatus
ENSAPLG00000012618	SPEN	96	84.795	ENSSPAG00000012454	si:ch1073-335m2.2	99	84.795	Stegastes_partitus
ENSAPLG00000012618	SPEN	99	78.146	ENSSPAG00000006014	-	80	71.849	Stegastes_partitus
ENSAPLG00000012618	SPEN	100	46.111	ENSTRUG00000024350	-	99	46.146	Takifugu_rubripes
ENSAPLG00000012618	SPEN	96	75.827	ENSTNIG00000010907	-	99	76.845	Tetraodon_nigroviridis
ENSAPLG00000012618	SPEN	95	83.041	ENSTNIG00000014666	si:ch1073-335m2.2	98	83.041	Tetraodon_nigroviridis
ENSAPLG00000012618	SPEN	76	85.514	ENSTBEG00000003628	SPEN	73	85.514	Tupaia_belangeri
ENSAPLG00000012618	SPEN	82	86.977	ENSTTRG00000015704	SPEN	79	86.977	Tursiops_truncatus
ENSAPLG00000012618	SPEN	100	69.903	ENSVVUG00000028951	SPEN	96	70.198	Vulpes_vulpes
ENSAPLG00000012618	SPEN	100	60.990	ENSXETG00000023114	SPEN	99	61.188	Xenopus_tropicalis
ENSAPLG00000012618	SPEN	95	75.000	ENSXCOG00000004516	si:ch1073-335m2.2	98	75.000	Xiphophorus_couchianus
ENSAPLG00000012618	SPEN	91	84.615	ENSXMAG00000029887	si:ch1073-335m2.2	95	84.615	Xiphophorus_maculatus
ENSAPLG00000012618	SPEN	100	46.251	ENSXMAG00000021384	-	80	68.908	Xiphophorus_maculatus