EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000012660 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 260
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 15793 bases
Position: chrKB744128.1:17023-32815
Accession: 101792395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	1	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	2	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	3	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	4	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	5	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	6	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	7	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	8	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	9	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	10	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	11	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	12	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	13	14
ENSAPLP00000012437	zf-C2H2	PF00096.26	4e-90	14	14
ENSAPLP00000012437	zf-met	PF12874.7	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013176	-	2232	XM_005027183	ENSAPLP00000012437	744 (aa)	-	U3IYW1

Gene Model

Click here to download ENSAPLG00000012660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000012660's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000012660	-	70	51.020	ENSAPLG00000004726	RREB1	55	40.385
ENSAPLG00000012660	-	76	51.163	ENSAPLG00000001423	-	100	51.163
ENSAPLG00000012660	-	66	44.444	ENSAPLG00000001945	-	100	44.444
ENSAPLG00000012660	-	81	38.971	ENSAPLG00000003920	-	53	38.971
ENSAPLG00000012660	-	72	44.615	ENSAPLG00000016376	-	57	44.615
ENSAPLG00000012660	-	81	36.364	ENSAPLG00000002277	ZNF319	98	36.364
ENSAPLG00000012660	-	83	34.211	ENSAPLG00000003518	-	96	34.211
ENSAPLG00000012660	-	88	43.750	ENSAPLG00000015700	GFI1	58	42.775
ENSAPLG00000012660	-	81	37.785	ENSAPLG00000007481	MYNN	51	37.785
ENSAPLG00000012660	-	81	40.741	ENSAPLG00000014682	ZNF236	71	40.741
ENSAPLG00000012660	-	82	38.211	ENSAPLG00000014760	-	100	38.211
ENSAPLG00000012660	-	81	36.842	ENSAPLG00000011730	SCRT2	96	36.842
ENSAPLG00000012660	-	59	35.000	ENSAPLG00000016199	OVOL2	71	35.000
ENSAPLG00000012660	-	71	43.750	ENSAPLG00000001861	-	99	43.750
ENSAPLG00000012660	-	81	39.931	ENSAPLG00000015467	ZBTB48	80	39.931
ENSAPLG00000012660	-	81	30.556	ENSAPLG00000009508	ZNF423	95	30.556
ENSAPLG00000012660	-	81	39.634	ENSAPLG00000011276	-	98	39.634
ENSAPLG00000012660	-	63	49.315	ENSAPLG00000015935	SCRT1	66	49.315
ENSAPLG00000012660	-	81	43.976	ENSAPLG00000003373	GFI1B	53	43.976
ENSAPLG00000012660	-	81	47.899	ENSAPLG00000004595	ZNF672	97	46.537
ENSAPLG00000012660	-	81	37.358	ENSAPLG00000013828	PRDM5	79	37.358
ENSAPLG00000012660	-	85	39.716	ENSAPLG00000014633	-	62	39.716
ENSAPLG00000012660	-	82	33.333	ENSAPLG00000003934	PATZ1	64	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000012660	-	81	51.506	ENSAMXG00000038453	-	82	51.506	Astyanax_mexicanus
ENSAPLG00000012660	-	81	49.455	ENSAMXG00000037326	-	93	52.416	Astyanax_mexicanus
ENSAPLG00000012660	-	81	54.647	ENSAMXG00000003002	-	88	54.647	Astyanax_mexicanus
ENSAPLG00000012660	-	81	50.621	ENSAMXG00000001626	-	91	50.621	Astyanax_mexicanus
ENSAPLG00000012660	-	82	48.409	ENSAMXG00000037143	-	95	48.409	Astyanax_mexicanus
ENSAPLG00000012660	-	80	58.095	ENSAMXG00000033124	-	66	58.095	Astyanax_mexicanus
ENSAPLG00000012660	-	81	52.013	ENSAMXG00000041725	-	96	52.013	Astyanax_mexicanus
ENSAPLG00000012660	-	83	53.026	ENSAMXG00000032619	-	100	52.210	Astyanax_mexicanus
ENSAPLG00000012660	-	84	50.142	ENSAMXG00000026144	-	92	50.142	Astyanax_mexicanus
ENSAPLG00000012660	-	81	51.706	ENSAMXG00000026142	-	89	49.869	Astyanax_mexicanus
ENSAPLG00000012660	-	81	54.706	ENSAMXG00000029878	-	99	54.706	Astyanax_mexicanus
ENSAPLG00000012660	-	81	56.170	ENSAMXG00000037703	-	87	56.170	Astyanax_mexicanus
ENSAPLG00000012660	-	81	43.917	ENSAMXG00000039881	-	88	43.917	Astyanax_mexicanus
ENSAPLG00000012660	-	81	52.740	ENSAMXG00000035690	-	80	52.740	Astyanax_mexicanus
ENSAPLG00000012660	-	81	49.762	ENSAMXG00000039752	-	92	49.762	Astyanax_mexicanus
ENSAPLG00000012660	-	81	50.833	ENSAMXG00000040212	-	95	49.512	Astyanax_mexicanus
ENSAPLG00000012660	-	81	50.610	ENSAMXG00000043978	-	88	50.473	Astyanax_mexicanus
ENSAPLG00000012660	-	81	57.338	ENSAMXG00000011804	-	98	53.894	Astyanax_mexicanus
ENSAPLG00000012660	-	81	51.364	ENSAMXG00000025455	-	98	51.364	Astyanax_mexicanus
ENSAPLG00000012660	-	81	56.637	ENSAMXG00000004610	-	98	56.637	Astyanax_mexicanus
ENSAPLG00000012660	-	81	49.235	ENSAMXG00000031489	-	93	48.706	Astyanax_mexicanus
ENSAPLG00000012660	-	81	53.886	ENSAMXG00000019489	-	95	53.886	Astyanax_mexicanus
ENSAPLG00000012660	-	82	43.872	ENSEASG00005020341	-	94	44.862	Equus_asinus_asinus
ENSAPLG00000012660	-	82	41.379	ENSECAG00000039445	-	93	45.111	Equus_caballus
ENSAPLG00000012660	-	82	43.872	ENSECAG00000017293	-	94	44.862	Equus_caballus
ENSAPLG00000012660	-	81	53.704	ENSGAGG00000017986	-	94	50.758	Gopherus_agassizii
ENSAPLG00000012660	-	97	56.098	ENSGAGG00000006960	-	98	51.494	Gopherus_agassizii
ENSAPLG00000012660	-	97	48.441	ENSGAGG00000019349	-	98	48.441	Gopherus_agassizii
ENSAPLG00000012660	-	81	60.753	ENSGAGG00000004740	-	90	60.753	Gopherus_agassizii
ENSAPLG00000012660	-	81	56.420	ENSGAGG00000015451	-	83	56.420	Gopherus_agassizii
ENSAPLG00000012660	-	81	56.886	ENSGAGG00000006683	-	93	53.957	Gopherus_agassizii
ENSAPLG00000012660	-	97	54.098	ENSGAGG00000008773	-	99	54.098	Gopherus_agassizii
ENSAPLG00000012660	-	81	56.048	ENSGAGG00000009739	-	100	56.048	Gopherus_agassizii
ENSAPLG00000012660	-	81	53.684	ENSGAGG00000011574	-	80	53.684	Gopherus_agassizii
ENSAPLG00000012660	-	81	53.668	ENSGAGG00000000971	-	91	53.668	Gopherus_agassizii
ENSAPLG00000012660	-	81	52.419	ENSIPUG00000015177	-	70	52.419	Ictalurus_punctatus
ENSAPLG00000012660	-	81	51.045	ENSIPUG00000015400	-	94	51.045	Ictalurus_punctatus
ENSAPLG00000012660	-	98	39.234	ENSMPUG00000008437	-	97	43.174	Mustela_putorius_furo
ENSAPLG00000012660	-	97	46.263	ENSPTIG00000009259	-	97	46.263	Panthera_tigris_altaica
ENSAPLG00000012660	-	81	55.833	ENSPSIG00000016247	-	53	55.833	Pelodiscus_sinensis
ENSAPLG00000012660	-	81	54.839	ENSPNAG00000016045	-	68	54.839	Pygocentrus_nattereri
ENSAPLG00000012660	-	92	54.307	ENSPNAG00000018437	-	82	54.307	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	58.197	ENSPNAG00000024704	-	90	58.197	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	52.778	ENSPNAG00000008653	-	97	52.778	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	57.848	ENSPNAG00000007072	-	94	57.848	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	50.265	ENSPNAG00000003526	-	86	50.265	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	58.108	ENSPNAG00000016025	-	90	58.108	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	53.247	ENSPNAG00000017455	-	77	53.247	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	53.247	ENSPNAG00000005914	-	77	53.247	Pygocentrus_nattereri
ENSAPLG00000012660	-	82	51.541	ENSPNAG00000028765	-	90	50.568	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	47.205	ENSPNAG00000029386	-	86	47.205	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	53.651	ENSPNAG00000018471	-	80	53.312	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	56.226	ENSPNAG00000002287	-	85	56.226	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	52.454	ENSPNAG00000012366	-	88	52.454	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	53.719	ENSPNAG00000012138	-	97	53.719	Pygocentrus_nattereri
ENSAPLG00000012660	-	82	49.533	ENSPNAG00000000783	-	90	49.533	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	54.839	ENSPNAG00000003919	-	98	54.839	Pygocentrus_nattereri
ENSAPLG00000012660	-	83	54.000	ENSPNAG00000021942	-	94	54.000	Pygocentrus_nattereri
ENSAPLG00000012660	-	81	52.196	ENSPNAG00000017479	-	85	50.239	Pygocentrus_nattereri
ENSAPLG00000012660	-	87	48.122	ENSUAMG00000027384	-	89	47.332	Ursus_americanus
ENSAPLG00000012660	-	84	49.758	ENSUAMG00000027415	-	89	49.758	Ursus_americanus
ENSAPLG00000012660	-	81	51.389	ENSVPAG00000002698	-	99	51.389	Vicugna_pacos