EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000012715 (Gene tree)
Gene ID: 101798399
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 13543 bases
Position: chrKB743857.1:125462-139004
Accession: 101798399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000012509	Exo_endo_phos	PF03372.23	5.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013250	CNOT6-201	1777	XM_005025809	ENSAPLP00000012509	560 (aa)	XP_005025866	U3IZ33

Gene Model

Click here to download ENSAPLG00000012715's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000012715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000012715	CNOT6	99	79.070	ENSAPLG00000003448	CNOT6L	100	79.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000012715	CNOT6	99	95.691	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSAPLG00000012715	CNOT6	99	87.835	ENSAPOG00000009994	cnot6b	100	87.478	Acanthochromis_polyacanthus
ENSAPLG00000012715	CNOT6	99	96.435	ENSAMEG00000000949	CNOT6	99	96.435	Ailuropoda_melanoleuca
ENSAPLG00000012715	CNOT6	99	86.762	ENSACIG00000016566	cnot6b	100	86.404	Amphilophus_citrinellus
ENSAPLG00000012715	CNOT6	99	87.835	ENSAOCG00000006893	cnot6b	100	87.478	Amphiprion_ocellaris
ENSAPLG00000012715	CNOT6	99	87.835	ENSAPEG00000016949	cnot6b	100	87.478	Amphiprion_percula
ENSAPLG00000012715	CNOT6	99	86.047	ENSATEG00000007862	cnot6b	100	85.689	Anabas_testudineus
ENSAPLG00000012715	CNOT6	99	96.050	ENSACAG00000016548	CNOT6	100	96.050	Anolis_carolinensis
ENSAPLG00000012715	CNOT6	99	96.050	ENSANAG00000030436	CNOT6	96	96.050	Aotus_nancymaae
ENSAPLG00000012715	CNOT6	99	85.689	ENSACLG00000008279	cnot6b	100	86.225	Astatotilapia_calliptera
ENSAPLG00000012715	CNOT6	99	86.201	ENSAMXG00000034694	cnot6b	100	86.201	Astyanax_mexicanus
ENSAPLG00000012715	CNOT6	99	87.993	ENSAMXG00000019140	cnot6a	100	87.993	Astyanax_mexicanus
ENSAPLG00000012715	CNOT6	99	96.050	ENSBTAG00000017362	CNOT6	100	96.050	Bos_taurus
ENSAPLG00000012715	CNOT6	99	95.871	ENSCJAG00000009795	CNOT6	100	95.871	Callithrix_jacchus
ENSAPLG00000012715	CNOT6	99	96.589	ENSCAFG00000000464	CNOT6	100	96.589	Canis_familiaris
ENSAPLG00000012715	CNOT6	99	96.589	ENSCAFG00020002441	CNOT6	100	96.589	Canis_lupus_dingo
ENSAPLG00000012715	CNOT6	99	95.871	ENSCHIG00000019100	CNOT6	100	95.871	Capra_hircus
ENSAPLG00000012715	CNOT6	99	94.614	ENSTSYG00000003982	CNOT6	100	94.614	Carlito_syrichta
ENSAPLG00000012715	CNOT6	99	90.664	ENSCPOG00000035657	CNOT6	100	90.664	Cavia_porcellus
ENSAPLG00000012715	CNOT6	99	91.382	ENSCCAG00000033670	CNOT6	100	91.382	Cebus_capucinus
ENSAPLG00000012715	CNOT6	99	95.691	ENSCATG00000042014	CNOT6	100	95.691	Cercocebus_atys
ENSAPLG00000012715	CNOT6	99	94.255	ENSCLAG00000010489	CNOT6	100	94.255	Chinchilla_lanigera
ENSAPLG00000012715	CNOT6	99	95.691	ENSCSAG00000008165	CNOT6	100	95.691	Chlorocebus_sabaeus
ENSAPLG00000012715	CNOT6	99	95.512	ENSCHOG00000009680	CNOT6	100	95.512	Choloepus_hoffmanni
ENSAPLG00000012715	CNOT6	99	98.205	ENSCPBG00000008908	CNOT6	100	98.205	Chrysemys_picta_bellii
ENSAPLG00000012715	CNOT6	99	95.871	ENSCANG00000026756	CNOT6	100	95.871	Colobus_angolensis_palliatus
ENSAPLG00000012715	CNOT6	99	94.075	ENSCGRG00001011452	Cnot6	100	94.075	Cricetulus_griseus_chok1gshd
ENSAPLG00000012715	CNOT6	99	92.460	ENSCGRG00000010407	Cnot6	100	92.460	Cricetulus_griseus_crigri
ENSAPLG00000012715	CNOT6	99	86.941	ENSCSEG00000010939	cnot6b	100	86.583	Cynoglossus_semilaevis
ENSAPLG00000012715	CNOT6	99	86.380	ENSCVAG00000010538	cnot6b	100	86.022	Cyprinodon_variegatus
ENSAPLG00000012715	CNOT6	99	87.276	ENSDARG00000008255	cnot6a	100	87.276	Danio_rerio
ENSAPLG00000012715	CNOT6	99	84.946	ENSDARG00000101072	cnot6b	100	84.946	Danio_rerio
ENSAPLG00000012715	CNOT6	99	96.230	ENSDNOG00000041644	CNOT6	100	96.230	Dasypus_novemcinctus
ENSAPLG00000012715	CNOT6	99	84.919	ENSDORG00000001708	Cnot6	100	84.919	Dipodomys_ordii
ENSAPLG00000012715	CNOT6	99	77.281	ENSETEG00000006975	CNOT6	100	77.281	Echinops_telfairi
ENSAPLG00000012715	CNOT6	99	95.512	ENSEASG00005012794	-	100	95.512	Equus_asinus_asinus
ENSAPLG00000012715	CNOT6	89	90.000	ENSEASG00005012957	-	99	90.000	Equus_asinus_asinus
ENSAPLG00000012715	CNOT6	99	96.230	ENSECAG00000019325	CNOT6	100	96.230	Equus_caballus
ENSAPLG00000012715	CNOT6	99	89.587	ENSECAG00000012704	-	99	89.587	Equus_caballus
ENSAPLG00000012715	CNOT6	99	95.153	ENSEEUG00000015382	CNOT6	100	95.153	Erinaceus_europaeus
ENSAPLG00000012715	CNOT6	99	83.951	ENSELUG00000015981	cnot6b	99	83.245	Esox_lucius
ENSAPLG00000012715	CNOT6	99	83.513	ENSELUG00000024580	cnot6a	100	83.513	Esox_lucius
ENSAPLG00000012715	CNOT6	99	96.589	ENSFCAG00000001881	CNOT6	100	96.589	Felis_catus
ENSAPLG00000012715	CNOT6	99	99.641	ENSFALG00000007699	CNOT6	100	99.641	Ficedula_albicollis
ENSAPLG00000012715	CNOT6	99	94.255	ENSFDAG00000001999	CNOT6	100	94.255	Fukomys_damarensis
ENSAPLG00000012715	CNOT6	64	90.476	ENSFHEG00000013756	cnot6b	96	90.476	Fundulus_heteroclitus
ENSAPLG00000012715	CNOT6	95	86.064	ENSGMOG00000009767	cnot6b	99	86.064	Gadus_morhua
ENSAPLG00000012715	CNOT6	99	99.461	ENSGALG00000034316	CNOT6	100	99.461	Gallus_gallus
ENSAPLG00000012715	CNOT6	99	86.559	ENSGAFG00000008525	cnot6b	100	86.201	Gambusia_affinis
ENSAPLG00000012715	CNOT6	95	83.835	ENSGACG00000018046	cnot6b	99	83.835	Gasterosteus_aculeatus
ENSAPLG00000012715	CNOT6	99	81.688	ENSGAGG00000012176	CNOT6	100	81.688	Gopherus_agassizii
ENSAPLG00000012715	CNOT6	99	95.691	ENSGGOG00000003675	CNOT6	100	95.691	Gorilla_gorilla
ENSAPLG00000012715	CNOT6	99	85.868	ENSHBUG00000002819	cnot6b	100	86.404	Haplochromis_burtoni
ENSAPLG00000012715	CNOT6	99	94.434	ENSHGLG00000017756	CNOT6	100	94.434	Heterocephalus_glaber_female
ENSAPLG00000012715	CNOT6	99	94.444	ENSHGLG00100005747	CNOT6	100	94.434	Heterocephalus_glaber_male
ENSAPLG00000012715	CNOT6	99	84.436	ENSHCOG00000016176	cnot6b	100	84.973	Hippocampus_comes
ENSAPLG00000012715	CNOT6	99	85.484	ENSIPUG00000017482	cnot6b	100	85.484	Ictalurus_punctatus
ENSAPLG00000012715	CNOT6	99	86.738	ENSIPUG00000019831	cnot6a	100	86.738	Ictalurus_punctatus
ENSAPLG00000012715	CNOT6	99	96.409	ENSSTOG00000002803	CNOT6	100	96.409	Ictidomys_tridecemlineatus
ENSAPLG00000012715	CNOT6	99	94.434	ENSJJAG00000012296	Cnot6	100	94.434	Jaculus_jaculus
ENSAPLG00000012715	CNOT6	99	87.097	ENSKMAG00000004640	cnot6b	100	86.738	Kryptolebias_marmoratus
ENSAPLG00000012715	CNOT6	99	84.794	ENSLBEG00000027917	cnot6b	100	85.331	Labrus_bergylta
ENSAPLG00000012715	CNOT6	100	91.266	ENSLOCG00000010102	cnot6b	100	91.266	Lepisosteus_oculatus
ENSAPLG00000012715	CNOT6	99	96.768	ENSLAFG00000016742	CNOT6	100	96.768	Loxodonta_africana
ENSAPLG00000012715	CNOT6	99	95.691	ENSMFAG00000030867	CNOT6	100	95.691	Macaca_fascicularis
ENSAPLG00000012715	CNOT6	99	95.691	ENSMMUG00000018690	CNOT6	100	95.691	Macaca_mulatta
ENSAPLG00000012715	CNOT6	99	95.691	ENSMNEG00000038565	CNOT6	100	95.691	Macaca_nemestrina
ENSAPLG00000012715	CNOT6	99	95.691	ENSMLEG00000010555	CNOT6	100	95.691	Mandrillus_leucophaeus
ENSAPLG00000012715	CNOT6	99	88.014	ENSMAMG00000007515	cnot6b	100	87.657	Mastacembelus_armatus
ENSAPLG00000012715	CNOT6	99	85.689	ENSMZEG00005012899	cnot6b	100	86.225	Maylandia_zebra
ENSAPLG00000012715	CNOT6	99	95.153	ENSMAUG00000019798	Cnot6	100	95.153	Mesocricetus_auratus
ENSAPLG00000012715	CNOT6	99	94.255	ENSMICG00000013018	-	100	94.255	Microcebus_murinus
ENSAPLG00000012715	CNOT6	97	85.662	ENSMICG00000028378	-	99	85.662	Microcebus_murinus
ENSAPLG00000012715	CNOT6	99	94.973	ENSMOCG00000021662	Cnot6	100	94.973	Microtus_ochrogaster
ENSAPLG00000012715	CNOT6	99	84.767	ENSMMOG00000003227	cnot6b	100	84.767	Mola_mola
ENSAPLG00000012715	CNOT6	99	97.127	ENSMODG00000003979	CNOT6	100	97.127	Monodelphis_domestica
ENSAPLG00000012715	CNOT6	99	87.657	ENSMALG00000014251	cnot6b	100	87.299	Monopterus_albus
ENSAPLG00000012715	CNOT6	99	95.153	MGP_CAROLIEiJ_G0016277	Cnot6	100	95.153	Mus_caroli
ENSAPLG00000012715	CNOT6	99	95.153	ENSMUSG00000020362	Cnot6	100	95.153	Mus_musculus
ENSAPLG00000012715	CNOT6	99	95.153	MGP_PahariEiJ_G0017413	Cnot6	100	95.153	Mus_pahari
ENSAPLG00000012715	CNOT6	99	94.973	MGP_SPRETEiJ_G0017122	Cnot6	100	94.973	Mus_spretus
ENSAPLG00000012715	CNOT6	100	96.071	ENSMPUG00000000587	CNOT6	97	96.071	Mustela_putorius_furo
ENSAPLG00000012715	CNOT6	99	94.128	ENSMLUG00000010257	CNOT6	100	94.128	Myotis_lucifugus
ENSAPLG00000012715	CNOT6	99	93.896	ENSNGAG00000008269	Cnot6	100	93.896	Nannospalax_galili
ENSAPLG00000012715	CNOT6	99	85.868	ENSNBRG00000010798	cnot6b	100	86.404	Neolamprologus_brichardi
ENSAPLG00000012715	CNOT6	99	94.434	ENSNLEG00000002322	CNOT6	100	94.434	Nomascus_leucogenys
ENSAPLG00000012715	CNOT6	81	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSAPLG00000012715	CNOT6	87	94.749	ENSOPRG00000008244	-	88	94.749	Ochotona_princeps
ENSAPLG00000012715	CNOT6	99	93.357	ENSODEG00000007041	CNOT6	100	93.357	Octodon_degus
ENSAPLG00000012715	CNOT6	76	86.150	ENSONIG00000013027	cnot6b	99	86.150	Oreochromis_niloticus
ENSAPLG00000012715	CNOT6	99	95.512	ENSOANG00000010226	CNOT6	100	95.512	Ornithorhynchus_anatinus
ENSAPLG00000012715	CNOT6	99	95.349	ENSOCUG00000011083	CNOT6	100	95.349	Oryctolagus_cuniculus
ENSAPLG00000012715	CNOT6	99	86.225	ENSORLG00000005059	cnot6b	100	85.868	Oryzias_latipes
ENSAPLG00000012715	CNOT6	99	86.225	ENSORLG00020012784	cnot6b	100	85.868	Oryzias_latipes_hni
ENSAPLG00000012715	CNOT6	93	85.277	ENSORLG00015022658	cnot6b	98	84.895	Oryzias_latipes_hsok
ENSAPLG00000012715	CNOT6	99	86.404	ENSOMEG00000005295	cnot6b	100	86.047	Oryzias_melastigma
ENSAPLG00000012715	CNOT6	93	95.802	ENSOGAG00000032470	CNOT6	100	95.802	Otolemur_garnettii
ENSAPLG00000012715	CNOT6	96	95.756	ENSOARG00000001003	CNOT6	100	95.756	Ovis_aries
ENSAPLG00000012715	CNOT6	99	95.691	ENSPPAG00000032253	CNOT6	100	95.691	Pan_paniscus
ENSAPLG00000012715	CNOT6	99	96.409	ENSPPRG00000011912	CNOT6	100	96.409	Panthera_pardus
ENSAPLG00000012715	CNOT6	99	96.409	ENSPTIG00000016794	CNOT6	100	96.409	Panthera_tigris_altaica
ENSAPLG00000012715	CNOT6	99	95.691	ENSPTRG00000017636	CNOT6	100	95.691	Pan_troglodytes
ENSAPLG00000012715	CNOT6	99	95.691	ENSPANG00000016191	CNOT6	100	95.691	Papio_anubis
ENSAPLG00000012715	CNOT6	99	88.530	ENSPKIG00000021368	cnot6b	100	88.530	Paramormyrops_kingsleyae
ENSAPLG00000012715	CNOT6	97	98.529	ENSPSIG00000017307	CNOT6	100	98.529	Pelodiscus_sinensis
ENSAPLG00000012715	CNOT6	99	86.583	ENSPMGG00000011238	cnot6b	100	86.225	Periophthalmus_magnuspinnatus
ENSAPLG00000012715	CNOT6	99	94.255	ENSPEMG00000000627	Cnot6	100	94.255	Peromyscus_maniculatus_bairdii
ENSAPLG00000012715	CNOT6	99	96.953	ENSPCIG00000020319	CNOT6	99	96.953	Phascolarctos_cinereus
ENSAPLG00000012715	CNOT6	100	85.740	ENSPFOG00000006291	cnot6b	100	86.022	Poecilia_formosa
ENSAPLG00000012715	CNOT6	99	82.796	ENSPLAG00000008266	cnot6b	100	82.437	Poecilia_latipinna
ENSAPLG00000012715	CNOT6	99	86.559	ENSPMEG00000009091	cnot6b	100	86.201	Poecilia_mexicana
ENSAPLG00000012715	CNOT6	99	85.484	ENSPREG00000003713	cnot6b	100	85.125	Poecilia_reticulata
ENSAPLG00000012715	CNOT6	99	95.691	ENSPPYG00000016137	CNOT6	100	95.691	Pongo_abelii
ENSAPLG00000012715	CNOT6	70	94.361	ENSPCAG00000005599	-	71	94.361	Procavia_capensis
ENSAPLG00000012715	CNOT6	99	90.485	ENSPCOG00000017359	CNOT6	100	91.203	Propithecus_coquereli
ENSAPLG00000012715	CNOT6	99	91.562	ENSPVAG00000003069	CNOT6	100	91.562	Pteropus_vampyrus
ENSAPLG00000012715	CNOT6	99	85.510	ENSPNYG00000000321	cnot6b	100	86.047	Pundamilia_nyererei
ENSAPLG00000012715	CNOT6	99	87.634	ENSPNAG00000029586	cnot6a	100	87.634	Pygocentrus_nattereri
ENSAPLG00000012715	CNOT6	99	86.380	ENSPNAG00000028816	cnot6b	100	86.380	Pygocentrus_nattereri
ENSAPLG00000012715	CNOT6	99	94.075	ENSRNOG00000054891	Cnot6	100	94.075	Rattus_norvegicus
ENSAPLG00000012715	CNOT6	99	95.512	ENSRBIG00000004309	CNOT6	100	95.512	Rhinopithecus_bieti
ENSAPLG00000012715	CNOT6	99	95.512	ENSRROG00000035378	CNOT6	100	95.512	Rhinopithecus_roxellana
ENSAPLG00000012715	CNOT6	99	95.871	ENSSBOG00000030494	CNOT6	100	95.871	Saimiri_boliviensis_boliviensis
ENSAPLG00000012715	CNOT6	99	97.127	ENSSHAG00000017436	CNOT6	100	97.127	Sarcophilus_harrisii
ENSAPLG00000012715	CNOT6	99	87.455	ENSSFOG00015022383	cnot6a	96	87.455	Scleropages_formosus
ENSAPLG00000012715	CNOT6	99	89.785	ENSSFOG00015015133	CNOT6	100	89.785	Scleropages_formosus
ENSAPLG00000012715	CNOT6	99	85.689	ENSSMAG00000003084	cnot6b	100	85.331	Scophthalmus_maximus
ENSAPLG00000012715	CNOT6	99	87.478	ENSSDUG00000004151	cnot6b	100	87.120	Seriola_dumerili
ENSAPLG00000012715	CNOT6	99	86.583	ENSSLDG00000004448	cnot6b	100	87.120	Seriola_lalandi_dorsalis
ENSAPLG00000012715	CNOT6	64	76.536	ENSSARG00000012650	-	100	76.536	Sorex_araneus
ENSAPLG00000012715	CNOT6	99	98.025	ENSSPUG00000007893	CNOT6	100	98.025	Sphenodon_punctatus
ENSAPLG00000012715	CNOT6	99	87.657	ENSSPAG00000000149	cnot6b	100	87.299	Stegastes_partitus
ENSAPLG00000012715	CNOT6	99	95.871	ENSSSCG00000014009	CNOT6	100	95.887	Sus_scrofa
ENSAPLG00000012715	CNOT6	99	99.282	ENSTGUG00000001119	CNOT6	100	99.282	Taeniopygia_guttata
ENSAPLG00000012715	CNOT6	99	84.740	ENSTRUG00000002818	cnot6b	100	84.740	Takifugu_rubripes
ENSAPLG00000012715	CNOT6	100	84.821	ENSTNIG00000004443	cnot6b	99	84.821	Tetraodon_nigroviridis
ENSAPLG00000012715	CNOT6	87	66.530	ENSTBEG00000017094	-	100	66.530	Tupaia_belangeri
ENSAPLG00000012715	CNOT6	99	96.050	ENSTTRG00000009363	CNOT6	100	96.050	Tursiops_truncatus
ENSAPLG00000012715	CNOT6	77	96.270	ENSUAMG00000004579	CNOT6	88	96.270	Ursus_americanus
ENSAPLG00000012715	CNOT6	99	92.123	ENSUMAG00000024577	CNOT6	100	92.123	Ursus_maritimus
ENSAPLG00000012715	CNOT6	83	94.159	ENSVPAG00000003593	CNOT6	83	94.159	Vicugna_pacos
ENSAPLG00000012715	CNOT6	99	96.589	ENSVVUG00000026940	CNOT6	100	96.589	Vulpes_vulpes
ENSAPLG00000012715	CNOT6	99	83.154	ENSXCOG00000003360	cnot6b	100	82.796	Xiphophorus_couchianus
ENSAPLG00000012715	CNOT6	99	86.559	ENSXMAG00000008730	cnot6b	100	86.201	Xiphophorus_maculatus