EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000013105 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: -
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 14495 bases
Position: chrKB743395.1:267972-282466
Accession: 101794140
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000012928	HAT	PF02184.16	2.1e-37	1	2
ENSAPLP00000012928	HAT	PF02184.16	2.1e-37	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013674	CRNKL1-201	2067	XM_005022636	ENSAPLP00000012928	688 (aa)	-	U3J0A1

Gene Model

Click here to download ENSAPLG00000013105's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013105	CRNKL1	98	92.250	ENSG00000101343	CRNKL1	99	90.393	Homo_sapiens
ENSAPLG00000013105	CRNKL1	98	85.015	ENSAPOG00000009705	crnkl1	97	85.015	Acanthochromis_polyacanthus
ENSAPLG00000013105	CRNKL1	98	92.846	ENSAMEG00000000270	CRNKL1	83	90.975	Ailuropoda_melanoleuca
ENSAPLG00000013105	CRNKL1	99	83.673	ENSACIG00000015267	crnkl1	91	83.673	Amphilophus_citrinellus
ENSAPLG00000013105	CRNKL1	99	84.012	ENSAOCG00000021964	crnkl1	89	85.460	Amphiprion_ocellaris
ENSAPLG00000013105	CRNKL1	99	84.559	ENSAPEG00000015041	crnkl1	88	85.907	Amphiprion_percula
ENSAPLG00000013105	CRNKL1	99	84.706	ENSATEG00000001068	crnkl1	87	86.186	Anabas_testudineus
ENSAPLG00000013105	CRNKL1	99	91.108	ENSACAG00000005284	CRNKL1	99	91.108	Anolis_carolinensis
ENSAPLG00000013105	CRNKL1	92	90.837	ENSANAG00000024889	CRNKL1	100	90.837	Aotus_nancymaae
ENSAPLG00000013105	CRNKL1	99	85.103	ENSACLG00000010813	crnkl1	90	85.103	Astatotilapia_calliptera
ENSAPLG00000013105	CRNKL1	97	85.865	ENSAMXG00000018334	crnkl1	90	85.949	Astyanax_mexicanus
ENSAPLG00000013105	CRNKL1	99	90.511	ENSBTAG00000008472	CRNKL1	99	90.511	Bos_taurus
ENSAPLG00000013105	CRNKL1	93	62.364	WBGene00019762	M03F8.3	92	60.813	Caenorhabditis_elegans
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCJAG00000005393	CRNKL1	99	90.247	Callithrix_jacchus
ENSAPLG00000013105	CRNKL1	98	92.548	ENSCAFG00000005333	CRNKL1	94	90.684	Canis_familiaris
ENSAPLG00000013105	CRNKL1	99	90.684	ENSCAFG00020027488	CRNKL1	99	90.684	Canis_lupus_dingo
ENSAPLG00000013105	CRNKL1	99	90.073	ENSCHIG00000013171	CRNKL1	99	90.073	Capra_hircus
ENSAPLG00000013105	CRNKL1	99	90.539	ENSTSYG00000004197	CRNKL1	99	90.539	Carlito_syrichta
ENSAPLG00000013105	CRNKL1	95	91.438	ENSCAPG00000010501	CRNKL1	99	91.438	Cavia_aperea
ENSAPLG00000013105	CRNKL1	99	89.811	ENSCPOG00000004418	CRNKL1	99	89.811	Cavia_porcellus
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCCAG00000027037	CRNKL1	99	90.247	Cebus_capucinus
ENSAPLG00000013105	CRNKL1	98	91.654	ENSCATG00000034247	CRNKL1	99	90.247	Cercocebus_atys
ENSAPLG00000013105	CRNKL1	99	90.102	ENSCLAG00000013859	CRNKL1	99	90.102	Chinchilla_lanigera
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCSAG00000011434	CRNKL1	99	90.247	Chlorocebus_sabaeus
ENSAPLG00000013105	CRNKL1	98	92.250	ENSCHOG00000006371	CRNKL1	82	92.250	Choloepus_hoffmanni
ENSAPLG00000013105	CRNKL1	99	92.117	ENSCPBG00000023501	CRNKL1	99	92.117	Chrysemys_picta_bellii
ENSAPLG00000013105	CRNKL1	97	67.868	ENSCING00000002709	-	99	66.959	Ciona_intestinalis
ENSAPLG00000013105	CRNKL1	98	91.803	ENSCANG00000038789	CRNKL1	99	90.393	Colobus_angolensis_palliatus
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCGRG00001001115	-	99	90.247	Cricetulus_griseus_chok1gshd
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCGRG00001000687	-	99	90.247	Cricetulus_griseus_chok1gshd
ENSAPLG00000013105	CRNKL1	99	90.247	ENSCGRG00000007854	Crnkl1	99	90.247	Cricetulus_griseus_crigri
ENSAPLG00000013105	CRNKL1	98	84.320	ENSCSEG00000005594	crnkl1	86	84.467	Cynoglossus_semilaevis
ENSAPLG00000013105	CRNKL1	97	85.157	ENSCVAG00000015172	crnkl1	89	85.909	Cyprinodon_variegatus
ENSAPLG00000013105	CRNKL1	96	84.917	ENSDARG00000007901	crnkl1	88	85.224	Danio_rerio
ENSAPLG00000013105	CRNKL1	99	90.949	ENSDNOG00000016226	CRNKL1	95	90.949	Dasypus_novemcinctus
ENSAPLG00000013105	CRNKL1	99	88.584	ENSDORG00000000394	-	99	88.584	Dipodomys_ordii
ENSAPLG00000013105	CRNKL1	97	82.265	ENSDORG00000030174	-	99	82.265	Dipodomys_ordii
ENSAPLG00000013105	CRNKL1	95	84.885	ENSDORG00000023724	-	97	84.885	Dipodomys_ordii
ENSAPLG00000013105	CRNKL1	95	68.024	FBgn0000377	crn	94	68.024	Drosophila_melanogaster
ENSAPLG00000013105	CRNKL1	99	78.748	ENSETEG00000003711	CRNKL1	84	78.748	Echinops_telfairi
ENSAPLG00000013105	CRNKL1	97	59.761	ENSEBUG00000013461	crnkl1	94	59.761	Eptatretus_burgeri
ENSAPLG00000013105	CRNKL1	99	91.254	ENSEASG00005002072	CRNKL1	99	91.254	Equus_asinus_asinus
ENSAPLG00000013105	CRNKL1	99	91.254	ENSECAG00000022215	CRNKL1	99	91.254	Equus_caballus
ENSAPLG00000013105	CRNKL1	98	89.717	ENSEEUG00000000413	CRNKL1	92	87.918	Erinaceus_europaeus
ENSAPLG00000013105	CRNKL1	97	83.707	ENSELUG00000015424	crnkl1	97	82.190	Esox_lucius
ENSAPLG00000013105	CRNKL1	99	90.975	ENSFCAG00000000714	CRNKL1	99	90.975	Felis_catus
ENSAPLG00000013105	CRNKL1	98	95.529	ENSFALG00000004611	CRNKL1	99	95.529	Ficedula_albicollis
ENSAPLG00000013105	CRNKL1	99	90.365	ENSFDAG00000000604	CRNKL1	99	90.247	Fukomys_damarensis
ENSAPLG00000013105	CRNKL1	98	84.421	ENSFHEG00000013163	crnkl1	86	85.909	Fundulus_heteroclitus
ENSAPLG00000013105	CRNKL1	97	83.683	ENSGMOG00000007609	crnkl1	94	82.190	Gadus_morhua
ENSAPLG00000013105	CRNKL1	99	95.912	ENSGALG00000008429	CRNKL1	99	95.912	Gallus_gallus
ENSAPLG00000013105	CRNKL1	97	84.708	ENSGAFG00000014249	crnkl1	87	85.455	Gambusia_affinis
ENSAPLG00000013105	CRNKL1	97	84.558	ENSGACG00000011852	crnkl1	87	86.064	Gasterosteus_aculeatus
ENSAPLG00000013105	CRNKL1	95	93.598	ENSGAGG00000021233	CRNKL1	99	93.598	Gopherus_agassizii
ENSAPLG00000013105	CRNKL1	98	92.250	ENSGGOG00000014176	CRNKL1	99	90.393	Gorilla_gorilla
ENSAPLG00000013105	CRNKL1	99	84.956	ENSHBUG00000005246	crnkl1	90	84.956	Haplochromis_burtoni
ENSAPLG00000013105	CRNKL1	99	89.956	ENSHGLG00000010856	CRNKL1	99	89.956	Heterocephalus_glaber_female
ENSAPLG00000013105	CRNKL1	99	89.956	ENSHGLG00100011521	CRNKL1	99	89.956	Heterocephalus_glaber_male
ENSAPLG00000013105	CRNKL1	99	82.507	ENSHCOG00000006420	crnkl1	99	82.507	Hippocampus_comes
ENSAPLG00000013105	CRNKL1	94	88.444	ENSIPUG00000006751	crnkl1	93	86.736	Ictalurus_punctatus
ENSAPLG00000013105	CRNKL1	93	66.771	ENSIPUG00000000315	-	100	67.975	Ictalurus_punctatus
ENSAPLG00000013105	CRNKL1	95	75.725	ENSIPUG00000006836	-	97	75.492	Ictalurus_punctatus
ENSAPLG00000013105	CRNKL1	99	90.393	ENSSTOG00000014747	CRNKL1	99	90.393	Ictidomys_tridecemlineatus
ENSAPLG00000013105	CRNKL1	99	88.746	ENSJJAG00000016926	Crnkl1	99	88.746	Jaculus_jaculus
ENSAPLG00000013105	CRNKL1	97	85.757	ENSKMAG00000003620	crnkl1	83	87.289	Kryptolebias_marmoratus
ENSAPLG00000013105	CRNKL1	97	69.288	ENSLBEG00000003543	crnkl1	92	69.489	Labrus_bergylta
ENSAPLG00000013105	CRNKL1	99	86.696	ENSLACG00000001129	CRNKL1	99	86.696	Latimeria_chalumnae
ENSAPLG00000013105	CRNKL1	97	87.368	ENSLOCG00000016889	crnkl1	95	86.131	Lepisosteus_oculatus
ENSAPLG00000013105	CRNKL1	97	92.481	ENSLAFG00000004512	CRNKL1	97	92.399	Loxodonta_africana
ENSAPLG00000013105	CRNKL1	99	90.247	ENSMFAG00000039893	CRNKL1	99	90.247	Macaca_fascicularis
ENSAPLG00000013105	CRNKL1	99	90.247	ENSMMUG00000007709	CRNKL1	99	90.247	Macaca_mulatta
ENSAPLG00000013105	CRNKL1	99	90.247	ENSMNEG00000037490	CRNKL1	99	90.247	Macaca_nemestrina
ENSAPLG00000013105	CRNKL1	99	90.247	ENSMLEG00000034885	CRNKL1	99	90.247	Mandrillus_leucophaeus
ENSAPLG00000013105	CRNKL1	99	83.994	ENSMAMG00000008757	crnkl1	90	83.994	Mastacembelus_armatus
ENSAPLG00000013105	CRNKL1	99	85.103	ENSMZEG00005022345	crnkl1	90	85.103	Maylandia_zebra
ENSAPLG00000013105	CRNKL1	99	95.912	ENSMGAG00000003452	CRNKL1	94	95.912	Meleagris_gallopavo
ENSAPLG00000013105	CRNKL1	99	90.102	ENSMAUG00000020764	Crnkl1	99	90.102	Mesocricetus_auratus
ENSAPLG00000013105	CRNKL1	99	90.684	ENSMICG00000006048	CRNKL1	99	90.684	Microcebus_murinus
ENSAPLG00000013105	CRNKL1	97	65.067	ENSMOCG00000004179	-	96	65.185	Microtus_ochrogaster
ENSAPLG00000013105	CRNKL1	93	87.786	ENSMOCG00000000681	-	98	87.786	Microtus_ochrogaster
ENSAPLG00000013105	CRNKL1	92	84.628	ENSMMOG00000017601	crnkl1	97	84.628	Mola_mola
ENSAPLG00000013105	CRNKL1	99	87.914	ENSMODG00000005961	-	99	87.914	Monodelphis_domestica
ENSAPLG00000013105	CRNKL1	98	85.395	ENSMODG00000010857	-	97	85.395	Monodelphis_domestica
ENSAPLG00000013105	CRNKL1	98	63.947	ENSMALG00000011211	crnkl1	86	62.991	Monopterus_albus
ENSAPLG00000013105	CRNKL1	99	90.102	MGP_CAROLIEiJ_G0024394	Crnkl1	99	90.102	Mus_caroli
ENSAPLG00000013105	CRNKL1	99	90.247	ENSMUSG00000001767	Crnkl1	99	90.247	Mus_musculus
ENSAPLG00000013105	CRNKL1	99	88.937	MGP_PahariEiJ_G0025838	Crnkl1	99	88.937	Mus_pahari
ENSAPLG00000013105	CRNKL1	99	90.247	MGP_SPRETEiJ_G0025312	Crnkl1	99	90.247	Mus_spretus
ENSAPLG00000013105	CRNKL1	99	91.121	ENSMPUG00000001226	CRNKL1	99	91.121	Mustela_putorius_furo
ENSAPLG00000013105	CRNKL1	98	92.399	ENSMLUG00000016513	CRNKL1	89	90.539	Myotis_lucifugus
ENSAPLG00000013105	CRNKL1	99	88.269	ENSNGAG00000023097	Crnkl1	99	88.269	Nannospalax_galili
ENSAPLG00000013105	CRNKL1	99	85.251	ENSNBRG00000007867	crnkl1	89	85.251	Neolamprologus_brichardi
ENSAPLG00000013105	CRNKL1	99	87.482	ENSNLEG00000009862	CRNKL1	99	87.482	Nomascus_leucogenys
ENSAPLG00000013105	CRNKL1	97	92.836	ENSMEUG00000012167	-	99	92.836	Notamacropus_eugenii
ENSAPLG00000013105	CRNKL1	99	82.945	ENSMEUG00000002361	-	99	82.945	Notamacropus_eugenii
ENSAPLG00000013105	CRNKL1	86	62.380	ENSOPRG00000009242	-	62	62.380	Ochotona_princeps
ENSAPLG00000013105	CRNKL1	99	90.247	ENSODEG00000012175	CRNKL1	99	90.247	Octodon_degus
ENSAPLG00000013105	CRNKL1	99	85.103	ENSONIG00000018728	crnkl1	89	85.103	Oreochromis_niloticus
ENSAPLG00000013105	CRNKL1	97	92.319	ENSOCUG00000015484	CRNKL1	81	92.262	Oryctolagus_cuniculus
ENSAPLG00000013105	CRNKL1	97	83.358	ENSORLG00000017240	crnkl1	96	78.986	Oryzias_latipes
ENSAPLG00000013105	CRNKL1	97	83.508	ENSORLG00020001742	crnkl1	89	83.508	Oryzias_latipes_hni
ENSAPLG00000013105	CRNKL1	97	83.508	ENSORLG00015019564	crnkl1	89	83.508	Oryzias_latipes_hsok
ENSAPLG00000013105	CRNKL1	99	82.430	ENSOMEG00000019895	crnkl1	91	82.430	Oryzias_melastigma
ENSAPLG00000013105	CRNKL1	99	90.247	ENSOGAG00000011544	CRNKL1	99	90.247	Otolemur_garnettii
ENSAPLG00000013105	CRNKL1	97	92.377	ENSOARG00000002150	CRNKL1	89	90.511	Ovis_aries
ENSAPLG00000013105	CRNKL1	98	91.803	ENSPPAG00000027847	CRNKL1	83	89.956	Pan_paniscus
ENSAPLG00000013105	CRNKL1	99	90.975	ENSPPRG00000001955	CRNKL1	99	90.975	Panthera_pardus
ENSAPLG00000013105	CRNKL1	98	92.399	ENSPTIG00000007393	CRNKL1	99	90.975	Panthera_tigris_altaica
ENSAPLG00000013105	CRNKL1	99	90.393	ENSPTRG00000030609	CRNKL1	99	90.393	Pan_troglodytes
ENSAPLG00000013105	CRNKL1	99	90.247	ENSPANG00000017420	CRNKL1	99	90.247	Papio_anubis
ENSAPLG00000013105	CRNKL1	96	81.203	ENSPKIG00000017093	crnkl1	87	81.886	Paramormyrops_kingsleyae
ENSAPLG00000013105	CRNKL1	98	94.188	ENSPSIG00000012705	CRNKL1	98	94.188	Pelodiscus_sinensis
ENSAPLG00000013105	CRNKL1	99	76.912	ENSPMGG00000006263	crnkl1	96	76.912	Periophthalmus_magnuspinnatus
ENSAPLG00000013105	CRNKL1	99	90.539	ENSPEMG00000000073	-	99	90.539	Peromyscus_maniculatus_bairdii
ENSAPLG00000013105	CRNKL1	99	80.378	ENSPMAG00000002250	crnkl1	99	80.378	Petromyzon_marinus
ENSAPLG00000013105	CRNKL1	99	90.365	ENSPCIG00000025825	CRNKL1	96	90.365	Phascolarctos_cinereus
ENSAPLG00000013105	CRNKL1	97	84.558	ENSPFOG00000005102	crnkl1	89	85.303	Poecilia_formosa
ENSAPLG00000013105	CRNKL1	97	84.558	ENSPLAG00000007288	crnkl1	86	85.303	Poecilia_latipinna
ENSAPLG00000013105	CRNKL1	97	84.708	ENSPMEG00000008865	crnkl1	91	83.976	Poecilia_mexicana
ENSAPLG00000013105	CRNKL1	97	84.258	ENSPREG00000012615	crnkl1	90	84.054	Poecilia_reticulata
ENSAPLG00000013105	CRNKL1	98	92.250	ENSPPYG00000010747	CRNKL1	81	90.393	Pongo_abelii
ENSAPLG00000013105	CRNKL1	98	86.736	ENSPCAG00000003296	CRNKL1	85	85.007	Procavia_capensis
ENSAPLG00000013105	CRNKL1	98	91.654	ENSPCOG00000017608	CRNKL1	83	89.811	Propithecus_coquereli
ENSAPLG00000013105	CRNKL1	98	92.250	ENSPVAG00000006207	CRNKL1	83	90.393	Pteropus_vampyrus
ENSAPLG00000013105	CRNKL1	99	84.956	ENSPNYG00000001977	crnkl1	90	84.956	Pundamilia_nyererei
ENSAPLG00000013105	CRNKL1	98	86.289	ENSPNAG00000001507	crnkl1	97	82.673	Pygocentrus_nattereri
ENSAPLG00000013105	CRNKL1	99	89.956	ENSRNOG00000040045	Crnkl1	99	89.956	Rattus_norvegicus
ENSAPLG00000013105	CRNKL1	99	90.247	ENSRNOG00000010587	Crnkl1	99	90.247	Rattus_norvegicus
ENSAPLG00000013105	CRNKL1	99	90.102	ENSRBIG00000031770	CRNKL1	99	90.102	Rhinopithecus_bieti
ENSAPLG00000013105	CRNKL1	99	89.956	ENSRROG00000040450	CRNKL1	99	89.956	Rhinopithecus_roxellana
ENSAPLG00000013105	CRNKL1	96	38.088	YLR117C	CLF1	99	38.177	Saccharomyces_cerevisiae
ENSAPLG00000013105	CRNKL1	98	91.654	ENSSBOG00000029672	CRNKL1	99	90.247	Saimiri_boliviensis_boliviensis
ENSAPLG00000013105	CRNKL1	96	73.946	ENSSHAG00000011199	CRNKL1	99	73.946	Sarcophilus_harrisii
ENSAPLG00000013105	CRNKL1	96	84.917	ENSSFOG00015000946	crnkl1	89	83.358	Scleropages_formosus
ENSAPLG00000013105	CRNKL1	99	82.824	ENSSMAG00000007933	crnkl1	87	84.250	Scophthalmus_maximus
ENSAPLG00000013105	CRNKL1	99	78.088	ENSSDUG00000012625	crnkl1	85	79.549	Seriola_dumerili
ENSAPLG00000013105	CRNKL1	99	84.389	ENSSLDG00000021413	crnkl1	86	85.865	Seriola_lalandi_dorsalis
ENSAPLG00000013105	CRNKL1	99	89.956	ENSSARG00000006443	CRNKL1	82	89.956	Sorex_araneus
ENSAPLG00000013105	CRNKL1	99	90.816	ENSSPUG00000005254	CRNKL1	99	90.816	Sphenodon_punctatus
ENSAPLG00000013105	CRNKL1	97	85.907	ENSSPAG00000016150	crnkl1	84	87.443	Stegastes_partitus
ENSAPLG00000013105	CRNKL1	99	90.684	ENSSSCG00000038587	CRNKL1	99	90.684	Sus_scrofa
ENSAPLG00000013105	CRNKL1	99	93.723	ENSTGUG00000007645	CRNKL1	99	93.469	Taeniopygia_guttata
ENSAPLG00000013105	CRNKL1	98	79.732	ENSTRUG00000015417	crnkl1	88	80.480	Takifugu_rubripes
ENSAPLG00000013105	CRNKL1	97	84.558	ENSTNIG00000010710	crnkl1	99	83.066	Tetraodon_nigroviridis
ENSAPLG00000013105	CRNKL1	90	90.762	ENSTBEG00000001304	CRNKL1	82	88.784	Tupaia_belangeri
ENSAPLG00000013105	CRNKL1	90	88.331	ENSTTRG00000000484	CRNKL1	81	86.414	Tursiops_truncatus
ENSAPLG00000013105	CRNKL1	99	90.975	ENSUAMG00000018586	CRNKL1	99	90.975	Ursus_americanus
ENSAPLG00000013105	CRNKL1	99	90.975	ENSUMAG00000024957	CRNKL1	99	90.975	Ursus_maritimus
ENSAPLG00000013105	CRNKL1	98	92.548	ENSVVUG00000012559	CRNKL1	82	90.684	Vulpes_vulpes
ENSAPLG00000013105	CRNKL1	99	89.343	ENSXETG00000009698	crnkl1	99	89.343	Xenopus_tropicalis
ENSAPLG00000013105	CRNKL1	97	84.708	ENSXCOG00000000824	crnkl1	90	83.976	Xiphophorus_couchianus
ENSAPLG00000013105	CRNKL1	97	84.708	ENSXMAG00000006896	crnkl1	88	85.455	Xiphophorus_maculatus