EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000013250 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 2149 bases
Position: chrKB743221.1:166259-168407
Accession: 101801654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013051	PseudoU_synth_2	PF00849.22	9.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013799	RPUSD4-201	876	XM_005021100	ENSAPLP00000013051	292 (aa)	XP_005021157	U3J0M4

Gene Model

Click here to download ENSAPLG00000013250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013250	RPUSD4	99	59.727	ENSG00000165526	RPUSD4	73	61.290	Homo_sapiens
ENSAPLG00000013250	RPUSD4	99	49.662	ENSAPOG00000011024	rpusd4	70	50.714	Acanthochromis_polyacanthus
ENSAPLG00000013250	RPUSD4	99	62.116	ENSAMEG00000000127	-	73	63.538	Ailuropoda_melanoleuca
ENSAPLG00000013250	RPUSD4	71	60.870	ENSAMEG00000005953	-	83	64.078	Ailuropoda_melanoleuca
ENSAPLG00000013250	RPUSD4	99	50.000	ENSACIG00000003533	rpusd4	82	50.709	Amphilophus_citrinellus
ENSAPLG00000013250	RPUSD4	99	49.324	ENSAOCG00000015409	rpusd4	70	50.000	Amphiprion_ocellaris
ENSAPLG00000013250	RPUSD4	99	49.662	ENSAPEG00000018935	rpusd4	70	50.355	Amphiprion_percula
ENSAPLG00000013250	RPUSD4	99	52.027	ENSATEG00000008059	rpusd4	70	52.837	Anabas_testudineus
ENSAPLG00000013250	RPUSD4	99	67.568	ENSACAG00000000189	RPUSD4	77	68.571	Anolis_carolinensis
ENSAPLG00000013250	RPUSD4	99	59.661	ENSANAG00000024050	RPUSD4	74	60.932	Aotus_nancymaae
ENSAPLG00000013250	RPUSD4	99	50.676	ENSACLG00000020996	rpusd4	72	51.418	Astatotilapia_calliptera
ENSAPLG00000013250	RPUSD4	99	51.701	ENSAMXG00000031479	rpusd4	78	52.518	Astyanax_mexicanus
ENSAPLG00000013250	RPUSD4	99	60.000	ENSBTAG00000020900	RPUSD4	73	60.932	Bos_taurus
ENSAPLG00000013250	RPUSD4	99	60.339	ENSCJAG00000042850	RPUSD4	70	61.649	Callithrix_jacchus
ENSAPLG00000013250	RPUSD4	99	59.661	ENSCAFG00000010488	RPUSD4	73	60.932	Canis_familiaris
ENSAPLG00000013250	RPUSD4	99	59.661	ENSCAFG00020010621	RPUSD4	73	60.932	Canis_lupus_dingo
ENSAPLG00000013250	RPUSD4	99	58.644	ENSCHIG00000009975	RPUSD4	73	59.498	Capra_hircus
ENSAPLG00000013250	RPUSD4	99	59.661	ENSTSYG00000008456	RPUSD4	74	60.932	Carlito_syrichta
ENSAPLG00000013250	RPUSD4	83	55.556	ENSCAPG00000006040	RPUSD4	93	55.556	Cavia_aperea
ENSAPLG00000013250	RPUSD4	99	58.644	ENSCPOG00000014971	RPUSD4	74	59.857	Cavia_porcellus
ENSAPLG00000013250	RPUSD4	99	59.661	ENSCCAG00000027838	RPUSD4	74	60.932	Cebus_capucinus
ENSAPLG00000013250	RPUSD4	99	58.983	ENSCATG00000041570	RPUSD4	73	60.573	Cercocebus_atys
ENSAPLG00000013250	RPUSD4	99	58.644	ENSCLAG00000016553	RPUSD4	73	59.857	Chinchilla_lanigera
ENSAPLG00000013250	RPUSD4	99	60.000	ENSCSAG00000002274	RPUSD4	73	61.649	Chlorocebus_sabaeus
ENSAPLG00000013250	RPUSD4	92	62.313	ENSCHOG00000010249	RPUSD4	94	62.313	Choloepus_hoffmanni
ENSAPLG00000013250	RPUSD4	96	73.929	ENSCPBG00000011175	RPUSD4	96	73.835	Chrysemys_picta_bellii
ENSAPLG00000013250	RPUSD4	92	41.007	ENSCSAVG00000000872	-	54	41.007	Ciona_savignyi
ENSAPLG00000013250	RPUSD4	99	60.339	ENSCANG00000039684	RPUSD4	73	62.007	Colobus_angolensis_palliatus
ENSAPLG00000013250	RPUSD4	99	58.305	ENSCGRG00001024141	Rpusd4	73	59.498	Cricetulus_griseus_chok1gshd
ENSAPLG00000013250	RPUSD4	99	58.305	ENSCGRG00000014415	Rpusd4	73	59.498	Cricetulus_griseus_crigri
ENSAPLG00000013250	RPUSD4	96	53.004	ENSCVAG00000008761	rpusd4	72	53.546	Cyprinodon_variegatus
ENSAPLG00000013250	RPUSD4	96	53.357	ENSCVAG00000000392	rpusd4	79	53.191	Cyprinodon_variegatus
ENSAPLG00000013250	RPUSD4	99	50.340	ENSDARG00000012674	rpusd4	77	51.439	Danio_rerio
ENSAPLG00000013250	RPUSD4	99	63.051	ENSDNOG00000020026	RPUSD4	74	64.158	Dasypus_novemcinctus
ENSAPLG00000013250	RPUSD4	99	59.727	ENSDORG00000016717	Rpusd4	73	61.011	Dipodomys_ordii
ENSAPLG00000013250	RPUSD4	99	59.322	ENSETEG00000013953	RPUSD4	74	60.573	Echinops_telfairi
ENSAPLG00000013250	RPUSD4	99	58.305	ENSEASG00005022982	RPUSD4	73	59.498	Equus_asinus_asinus
ENSAPLG00000013250	RPUSD4	99	57.966	ENSECAG00000000557	RPUSD4	73	59.140	Equus_caballus
ENSAPLG00000013250	RPUSD4	76	58.824	ENSEEUG00000014036	RPUSD4	55	68.571	Erinaceus_europaeus
ENSAPLG00000013250	RPUSD4	99	56.081	ENSELUG00000008075	rpusd4	73	57.500	Esox_lucius
ENSAPLG00000013250	RPUSD4	99	61.433	ENSFCAG00000029789	RPUSD4	73	62.366	Felis_catus
ENSAPLG00000013250	RPUSD4	99	81.017	ENSFALG00000005171	RPUSD4	82	82.796	Ficedula_albicollis
ENSAPLG00000013250	RPUSD4	99	58.305	ENSFDAG00000014307	RPUSD4	74	59.498	Fukomys_damarensis
ENSAPLG00000013250	RPUSD4	98	51.379	ENSFHEG00000004329	rpusd4	72	51.408	Fundulus_heteroclitus
ENSAPLG00000013250	RPUSD4	99	50.169	ENSGMOG00000017726	rpusd4	83	51.254	Gadus_morhua
ENSAPLG00000013250	RPUSD4	96	88.889	ENSGALG00000024326	RPUSD4	79	88.889	Gallus_gallus
ENSAPLG00000013250	RPUSD4	98	50.694	ENSGAFG00000021559	rpusd4	72	51.064	Gambusia_affinis
ENSAPLG00000013250	RPUSD4	96	52.297	ENSGACG00000001657	rpusd4	96	50.725	Gasterosteus_aculeatus
ENSAPLG00000013250	RPUSD4	99	72.881	ENSGAGG00000000132	RPUSD4	78	74.552	Gopherus_agassizii
ENSAPLG00000013250	RPUSD4	99	60.068	ENSGGOG00000016494	RPUSD4	73	61.649	Gorilla_gorilla
ENSAPLG00000013250	RPUSD4	99	50.676	ENSHBUG00000022838	rpusd4	72	51.418	Haplochromis_burtoni
ENSAPLG00000013250	RPUSD4	99	57.627	ENSHGLG00000002285	RPUSD4	73	58.781	Heterocephalus_glaber_female
ENSAPLG00000013250	RPUSD4	99	57.627	ENSHGLG00100006385	RPUSD4	73	58.781	Heterocephalus_glaber_male
ENSAPLG00000013250	RPUSD4	99	51.342	ENSHCOG00000006612	rpusd4	72	52.837	Hippocampus_comes
ENSAPLG00000013250	RPUSD4	99	51.351	ENSIPUG00000023879	rusd4	72	52.500	Ictalurus_punctatus
ENSAPLG00000013250	RPUSD4	99	60.410	ENSSTOG00000025280	RPUSD4	76	61.649	Ictidomys_tridecemlineatus
ENSAPLG00000013250	RPUSD4	99	58.305	ENSJJAG00000018673	Rpusd4	75	59.498	Jaculus_jaculus
ENSAPLG00000013250	RPUSD4	96	52.650	ENSKMAG00000021805	rpusd4	73	52.482	Kryptolebias_marmoratus
ENSAPLG00000013250	RPUSD4	99	49.324	ENSLBEG00000020394	rpusd4	78	50.000	Labrus_bergylta
ENSAPLG00000013250	RPUSD4	99	60.000	ENSLACG00000011028	RPUSD4	71	61.290	Latimeria_chalumnae
ENSAPLG00000013250	RPUSD4	99	47.987	ENSLOCG00000003124	rpusd4	74	48.227	Lepisosteus_oculatus
ENSAPLG00000013250	RPUSD4	99	58.983	ENSLAFG00000005211	RPUSD4	99	50.172	Loxodonta_africana
ENSAPLG00000013250	RPUSD4	99	59.661	ENSMFAG00000039513	RPUSD4	73	61.290	Macaca_fascicularis
ENSAPLG00000013250	RPUSD4	99	59.322	ENSMMUG00000007933	RPUSD4	73	60.932	Macaca_mulatta
ENSAPLG00000013250	RPUSD4	99	59.661	ENSMNEG00000027414	RPUSD4	73	61.290	Macaca_nemestrina
ENSAPLG00000013250	RPUSD4	99	59.661	ENSMLEG00000042461	RPUSD4	73	61.290	Mandrillus_leucophaeus
ENSAPLG00000013250	RPUSD4	98	50.000	ENSMAMG00000023839	rpusd4	72	50.714	Mastacembelus_armatus
ENSAPLG00000013250	RPUSD4	99	50.676	ENSMZEG00005011999	rpusd4	72	51.418	Maylandia_zebra
ENSAPLG00000013250	RPUSD4	95	85.560	ENSMGAG00000000840	RPUSD4	87	85.663	Meleagris_gallopavo
ENSAPLG00000013250	RPUSD4	99	59.122	ENSMAUG00000010280	Rpusd4	73	59.857	Mesocricetus_auratus
ENSAPLG00000013250	RPUSD4	99	60.000	ENSMICG00000015979	RPUSD4	83	60.932	Microcebus_murinus
ENSAPLG00000013250	RPUSD4	99	57.679	ENSMOCG00000000661	Rpusd4	73	58.781	Microtus_ochrogaster
ENSAPLG00000013250	RPUSD4	98	49.320	ENSMMOG00000021731	rpusd4	83	50.000	Mola_mola
ENSAPLG00000013250	RPUSD4	95	63.345	ENSMODG00000004521	RPUSD4	68	64.906	Monodelphis_domestica
ENSAPLG00000013250	RPUSD4	98	50.694	ENSMALG00000005839	rpusd4	85	51.064	Monopterus_albus
ENSAPLG00000013250	RPUSD4	99	59.661	MGP_CAROLIEiJ_G0031954	Rpusd4	73	60.932	Mus_caroli
ENSAPLG00000013250	RPUSD4	99	58.983	ENSMUSG00000032044	Rpusd4	73	60.215	Mus_musculus
ENSAPLG00000013250	RPUSD4	99	59.322	MGP_PahariEiJ_G0014819	Rpusd4	73	60.573	Mus_pahari
ENSAPLG00000013250	RPUSD4	99	59.322	MGP_SPRETEiJ_G0033078	Rpusd4	73	60.573	Mus_spretus
ENSAPLG00000013250	RPUSD4	99	62.034	ENSMPUG00000006608	RPUSD4	74	63.441	Mustela_putorius_furo
ENSAPLG00000013250	RPUSD4	86	60.714	ENSMLUG00000029348	-	98	60.714	Myotis_lucifugus
ENSAPLG00000013250	RPUSD4	99	61.017	ENSMLUG00000017328	-	73	62.366	Myotis_lucifugus
ENSAPLG00000013250	RPUSD4	99	61.356	ENSNGAG00000020847	Rpusd4	73	62.724	Nannospalax_galili
ENSAPLG00000013250	RPUSD4	99	50.676	ENSNBRG00000005207	rpusd4	82	51.418	Neolamprologus_brichardi
ENSAPLG00000013250	RPUSD4	99	59.386	ENSNLEG00000007465	RPUSD4	73	60.932	Nomascus_leucogenys
ENSAPLG00000013250	RPUSD4	99	62.712	ENSMEUG00000004370	RPUSD4	75	64.158	Notamacropus_eugenii
ENSAPLG00000013250	RPUSD4	51	56.757	ENSOPRG00000013141	-	55	56.757	Ochotona_princeps
ENSAPLG00000013250	RPUSD4	99	57.966	ENSODEG00000004577	RPUSD4	73	58.781	Octodon_degus
ENSAPLG00000013250	RPUSD4	99	51.014	ENSONIG00000018879	rpusd4	76	51.773	Oreochromis_niloticus
ENSAPLG00000013250	RPUSD4	99	63.514	ENSOANG00000007247	RPUSD4	89	64.769	Ornithorhynchus_anatinus
ENSAPLG00000013250	RPUSD4	99	59.797	ENSOCUG00000017039	RPUSD4	74	60.714	Oryctolagus_cuniculus
ENSAPLG00000013250	RPUSD4	96	51.237	ENSORLG00000002750	rpusd4	78	51.064	Oryzias_latipes
ENSAPLG00000013250	RPUSD4	96	50.530	ENSORLG00020002044	rpusd4	70	50.355	Oryzias_latipes_hni
ENSAPLG00000013250	RPUSD4	96	50.177	ENSORLG00015020034	rpusd4	70	50.000	Oryzias_latipes_hsok
ENSAPLG00000013250	RPUSD4	96	51.064	ENSOMEG00000004861	rpusd4	69	50.890	Oryzias_melastigma
ENSAPLG00000013250	RPUSD4	99	61.695	ENSOGAG00000008922	RPUSD4	73	62.724	Otolemur_garnettii
ENSAPLG00000013250	RPUSD4	99	58.983	ENSOARG00000012238	RPUSD4	73	59.857	Ovis_aries
ENSAPLG00000013250	RPUSD4	99	59.727	ENSPPAG00000042883	RPUSD4	68	61.290	Pan_paniscus
ENSAPLG00000013250	RPUSD4	99	61.092	ENSPPRG00000003081	RPUSD4	73	62.007	Panthera_pardus
ENSAPLG00000013250	RPUSD4	99	61.092	ENSPTIG00000012059	RPUSD4	79	62.455	Panthera_tigris_altaica
ENSAPLG00000013250	RPUSD4	99	59.727	ENSPTRG00000004454	RPUSD4	73	61.290	Pan_troglodytes
ENSAPLG00000013250	RPUSD4	99	59.661	ENSPANG00000015040	RPUSD4	73	61.290	Papio_anubis
ENSAPLG00000013250	RPUSD4	99	60.473	ENSPKIG00000023986	rpusd4	72	61.786	Paramormyrops_kingsleyae
ENSAPLG00000013250	RPUSD4	99	71.525	ENSPSIG00000014268	RPUSD4	89	73.118	Pelodiscus_sinensis
ENSAPLG00000013250	RPUSD4	96	50.177	ENSPMGG00000002806	rpusd4	78	50.000	Periophthalmus_magnuspinnatus
ENSAPLG00000013250	RPUSD4	99	51.525	ENSPEMG00000000278	Rpusd4	72	52.330	Peromyscus_maniculatus_bairdii
ENSAPLG00000013250	RPUSD4	99	42.331	ENSPMAG00000008183	rpusd4	90	42.903	Petromyzon_marinus
ENSAPLG00000013250	RPUSD4	99	62.373	ENSPCIG00000010212	RPUSD4	76	63.799	Phascolarctos_cinereus
ENSAPLG00000013250	RPUSD4	98	50.000	ENSPFOG00000019030	rpusd4	74	50.000	Poecilia_formosa
ENSAPLG00000013250	RPUSD4	98	50.000	ENSPLAG00000016848	rpusd4	71	51.071	Poecilia_latipinna
ENSAPLG00000013250	RPUSD4	98	50.694	ENSPMEG00000017534	rpusd4	71	50.709	Poecilia_mexicana
ENSAPLG00000013250	RPUSD4	87	53.101	ENSPREG00000005689	rpusd4	65	53.175	Poecilia_reticulata
ENSAPLG00000013250	RPUSD4	99	60.068	ENSPPYG00000004043	RPUSD4	73	61.649	Pongo_abelii
ENSAPLG00000013250	RPUSD4	76	56.863	ENSPCAG00000000753	RPUSD4	57	62.857	Procavia_capensis
ENSAPLG00000013250	RPUSD4	99	54.915	ENSPCOG00000020694	RPUSD4	73	55.556	Propithecus_coquereli
ENSAPLG00000013250	RPUSD4	99	58.983	ENSPVAG00000000988	RPUSD4	74	60.215	Pteropus_vampyrus
ENSAPLG00000013250	RPUSD4	99	51.014	ENSPNYG00000009652	rpusd4	72	51.773	Pundamilia_nyererei
ENSAPLG00000013250	RPUSD4	99	48.649	ENSPNAG00000012264	rpusd4	74	49.286	Pygocentrus_nattereri
ENSAPLG00000013250	RPUSD4	99	58.983	ENSRNOG00000011567	Rpusd4	73	60.215	Rattus_norvegicus
ENSAPLG00000013250	RPUSD4	99	60.000	ENSRBIG00000034842	RPUSD4	73	61.649	Rhinopithecus_bieti
ENSAPLG00000013250	RPUSD4	99	60.000	ENSRROG00000039753	RPUSD4	73	61.649	Rhinopithecus_roxellana
ENSAPLG00000013250	RPUSD4	99	60.000	ENSSBOG00000030413	RPUSD4	74	61.290	Saimiri_boliviensis_boliviensis
ENSAPLG00000013250	RPUSD4	99	62.373	ENSSHAG00000008304	RPUSD4	92	63.799	Sarcophilus_harrisii
ENSAPLG00000013250	RPUSD4	99	60.000	ENSSFOG00015006203	rpusd4	76	60.714	Scleropages_formosus
ENSAPLG00000013250	RPUSD4	96	53.710	ENSSMAG00000020978	rpusd4	74	53.763	Scophthalmus_maximus
ENSAPLG00000013250	RPUSD4	99	51.014	ENSSDUG00000013399	rpusd4	74	51.773	Seriola_dumerili
ENSAPLG00000013250	RPUSD4	99	51.014	ENSSLDG00000023507	rpusd4	74	51.773	Seriola_lalandi_dorsalis
ENSAPLG00000013250	RPUSD4	95	70.758	ENSSPUG00000001401	RPUSD4	77	70.609	Sphenodon_punctatus
ENSAPLG00000013250	RPUSD4	96	53.004	ENSSPAG00000012163	rpusd4	72	52.837	Stegastes_partitus
ENSAPLG00000013250	RPUSD4	99	58.983	ENSSSCG00000015233	RPUSD4	74	59.857	Sus_scrofa
ENSAPLG00000013250	RPUSD4	99	79.322	ENSTGUG00000000773	RPUSD4	93	81.004	Taeniopygia_guttata
ENSAPLG00000013250	RPUSD4	95	51.246	ENSTRUG00000012283	rpusd4	72	51.071	Takifugu_rubripes
ENSAPLG00000013250	RPUSD4	96	49.823	ENSTNIG00000014676	rpusd4	72	49.645	Tetraodon_nigroviridis
ENSAPLG00000013250	RPUSD4	99	57.966	ENSTTRG00000001555	RPUSD4	74	59.140	Tursiops_truncatus
ENSAPLG00000013250	RPUSD4	50	59.310	ENSUAMG00000005500	-	89	59.310	Ursus_americanus
ENSAPLG00000013250	RPUSD4	99	61.695	ENSUMAG00000002219	RPUSD4	73	63.082	Ursus_maritimus
ENSAPLG00000013250	RPUSD4	67	60.000	ENSVPAG00000001066	RPUSD4	69	61.413	Vicugna_pacos
ENSAPLG00000013250	RPUSD4	99	59.661	ENSVVUG00000020101	RPUSD4	73	60.932	Vulpes_vulpes
ENSAPLG00000013250	RPUSD4	97	50.699	ENSXCOG00000004676	rpusd4	73	51.071	Xiphophorus_couchianus
ENSAPLG00000013250	RPUSD4	97	50.350	ENSXMAG00000023351	rpusd4	71	50.714	Xiphophorus_maculatus