EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000013263 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 157281 bases
Position: chrKB742404.1:1095755-1253035
Accession: 101803943
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013069	Fox-1_C	PF12414.8	1.8e-43	1	1
ENSAPLP00000013069	RRM_1	PF00076.22	1.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000013817	RBFOX1-201	1197	XM_005009142	ENSAPLP00000013069	399 (aa)	-	U3J0P2

Gene Model

Click here to download ENSAPLG00000013263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000013263	RBFOX1	98	66.010	ENSAPLG00000007609	RBFOX2	98	66.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013263	RBFOX1	98	94.629	ENSG00000078328	RBFOX1	98	94.602	Homo_sapiens
ENSAPLG00000013263	RBFOX1	99	76.513	ENSAPOG00000003197	rbfox1	99	76.271	Acanthochromis_polyacanthus
ENSAPLG00000013263	RBFOX1	56	92.411	ENSAMEG00000008605	RBFOX1	90	92.411	Ailuropoda_melanoleuca
ENSAPLG00000013263	RBFOX1	67	64.527	ENSACIG00000005478	rbfox1	68	64.527	Amphilophus_citrinellus
ENSAPLG00000013263	RBFOX1	74	70.288	ENSAOCG00000008283	rbfox1	98	69.968	Amphiprion_ocellaris
ENSAPLG00000013263	RBFOX1	94	70.185	ENSAPEG00000010636	rbfox1	100	70.079	Amphiprion_percula
ENSAPLG00000013263	RBFOX1	73	69.968	ENSATEG00000007513	rbfox1	97	69.453	Anabas_testudineus
ENSAPLG00000013263	RBFOX1	99	88.945	ENSACAG00000004013	RBFOX1	99	88.945	Anolis_carolinensis
ENSAPLG00000013263	RBFOX1	98	92.347	ENSANAG00000029527	RBFOX1	98	92.347	Aotus_nancymaae
ENSAPLG00000013263	RBFOX1	57	88.546	ENSAMXG00000002431	rbfox1	73	80.392	Astyanax_mexicanus
ENSAPLG00000013263	RBFOX1	98	91.837	ENSBTAG00000007210	RBFOX1	98	91.837	Bos_taurus
ENSAPLG00000013263	RBFOX1	98	94.629	ENSCJAG00000017351	RBFOX1	94	94.629	Callithrix_jacchus
ENSAPLG00000013263	RBFOX1	98	92.857	ENSCAFG00000019082	RBFOX1	94	92.857	Canis_familiaris
ENSAPLG00000013263	RBFOX1	68	94.815	ENSCAFG00020024881	RBFOX1	76	94.815	Canis_lupus_dingo
ENSAPLG00000013263	RBFOX1	98	92.347	ENSCHIG00000023549	RBFOX1	98	92.347	Capra_hircus
ENSAPLG00000013263	RBFOX1	97	92.545	ENSTSYG00000005334	RBFOX1	100	92.545	Carlito_syrichta
ENSAPLG00000013263	RBFOX1	97	94.072	ENSCAPG00000017669	RBFOX1	100	94.072	Cavia_aperea
ENSAPLG00000013263	RBFOX1	98	93.590	ENSCPOG00000011314	RBFOX1	99	93.590	Cavia_porcellus
ENSAPLG00000013263	RBFOX1	98	92.602	ENSCCAG00000023031	RBFOX1	94	92.602	Cebus_capucinus
ENSAPLG00000013263	RBFOX1	98	92.602	ENSCATG00000033816	RBFOX1	94	92.602	Cercocebus_atys
ENSAPLG00000013263	RBFOX1	97	94.087	ENSCLAG00000012761	RBFOX1	98	93.830	Chinchilla_lanigera
ENSAPLG00000013263	RBFOX1	83	92.793	ENSCSAG00000008739	RBFOX1	89	92.793	Chlorocebus_sabaeus
ENSAPLG00000013263	RBFOX1	98	70.918	ENSCHOG00000012843	RBFOX1	94	70.918	Choloepus_hoffmanni
ENSAPLG00000013263	RBFOX1	97	99.485	ENSCPBG00000026626	RBFOX1	98	96.939	Chrysemys_picta_bellii
ENSAPLG00000013263	RBFOX1	98	92.602	ENSCANG00000033125	RBFOX1	94	92.602	Colobus_angolensis_palliatus
ENSAPLG00000013263	RBFOX1	97	93.573	ENSCGRG00001013729	Rbfox1	98	93.573	Cricetulus_griseus_chok1gshd
ENSAPLG00000013263	RBFOX1	97	93.573	ENSCGRG00000003272	Rbfox1	98	93.573	Cricetulus_griseus_crigri
ENSAPLG00000013263	RBFOX1	94	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSAPLG00000013263	RBFOX1	99	82.161	ENSDARG00000014746	rbfox1	100	87.805	Danio_rerio
ENSAPLG00000013263	RBFOX1	97	95.116	ENSDNOG00000043612	RBFOX1	94	95.116	Dasypus_novemcinctus
ENSAPLG00000013263	RBFOX1	97	92.092	ENSDORG00000010024	Rbfox1	97	91.837	Dipodomys_ordii
ENSAPLG00000013263	RBFOX1	98	73.469	ENSETEG00000003771	RBFOX1	94	73.469	Echinops_telfairi
ENSAPLG00000013263	RBFOX1	98	94.656	ENSEASG00005011599	RBFOX1	98	92.602	Equus_asinus_asinus
ENSAPLG00000013263	RBFOX1	98	92.386	ENSECAG00000012667	RBFOX1	91	92.612	Equus_caballus
ENSAPLG00000013263	RBFOX1	81	71.084	ENSELUG00000013096	rbfox1	96	71.084	Esox_lucius
ENSAPLG00000013263	RBFOX1	98	94.402	ENSFCAG00000025322	RBFOX1	90	94.402	Felis_catus
ENSAPLG00000013263	RBFOX1	82	98.171	ENSFALG00000004027	RBFOX1	98	98.171	Ficedula_albicollis
ENSAPLG00000013263	RBFOX1	97	94.344	ENSFDAG00000007388	RBFOX1	98	94.344	Fukomys_damarensis
ENSAPLG00000013263	RBFOX1	98	96.939	ENSGALG00000034325	RBFOX1	94	96.939	Gallus_gallus
ENSAPLG00000013263	RBFOX1	98	96.684	ENSGAGG00000023681	RBFOX1	100	99.204	Gopherus_agassizii
ENSAPLG00000013263	RBFOX1	98	92.602	ENSGGOG00000016871	-	99	89.258	Gorilla_gorilla
ENSAPLG00000013263	RBFOX1	97	94.344	ENSHGLG00000016944	RBFOX1	98	94.087	Heterocephalus_glaber_female
ENSAPLG00000013263	RBFOX1	97	94.344	ENSHGLG00100003272	RBFOX1	98	94.087	Heterocephalus_glaber_male
ENSAPLG00000013263	RBFOX1	84	70.317	ENSHCOG00000016419	rbfox1	91	70.201	Hippocampus_comes
ENSAPLG00000013263	RBFOX1	94	84.881	ENSIPUG00000015215	rbfox1	100	84.881	Ictalurus_punctatus
ENSAPLG00000013263	RBFOX1	97	93.830	ENSSTOG00000000322	RBFOX1	98	93.830	Ictidomys_tridecemlineatus
ENSAPLG00000013263	RBFOX1	97	91.260	ENSJJAG00000002575	Rbfox1	98	91.003	Jaculus_jaculus
ENSAPLG00000013263	RBFOX1	99	73.267	ENSLBEG00000014659	rbfox1	99	72.772	Labrus_bergylta
ENSAPLG00000013263	RBFOX1	98	89.594	ENSLOCG00000006675	rbfox1	99	89.594	Lepisosteus_oculatus
ENSAPLG00000013263	RBFOX1	77	95.779	ENSLAFG00000011480	RBFOX1	100	95.779	Loxodonta_africana
ENSAPLG00000013263	RBFOX1	98	92.857	ENSMFAG00000036447	RBFOX1	94	92.857	Macaca_fascicularis
ENSAPLG00000013263	RBFOX1	96	95.052	ENSMMUG00000003458	RBFOX1	97	95.052	Macaca_mulatta
ENSAPLG00000013263	RBFOX1	98	92.857	ENSMNEG00000032034	RBFOX1	94	92.857	Macaca_nemestrina
ENSAPLG00000013263	RBFOX1	98	92.602	ENSMLEG00000015382	RBFOX1	94	92.602	Mandrillus_leucophaeus
ENSAPLG00000013263	RBFOX1	94	74.745	ENSMAMG00000003142	rbfox1	100	75.255	Mastacembelus_armatus
ENSAPLG00000013263	RBFOX1	71	92.226	ENSMGAG00000008606	RBFOX1	96	92.086	Meleagris_gallopavo
ENSAPLG00000013263	RBFOX1	96	55.759	ENSMAUG00000020570	Rbfox1	96	54.427	Mesocricetus_auratus
ENSAPLG00000013263	RBFOX1	98	87.980	ENSMICG00000034286	RBFOX1	97	87.980	Microcebus_murinus
ENSAPLG00000013263	RBFOX1	97	93.573	ENSMOCG00000020932	Rbfox1	100	93.750	Microtus_ochrogaster
ENSAPLG00000013263	RBFOX1	84	72.566	ENSMMOG00000009716	rbfox1	86	71.976	Mola_mola
ENSAPLG00000013263	RBFOX1	80	95.611	ENSMODG00000005826	RBFOX1	90	95.611	Monodelphis_domestica
ENSAPLG00000013263	RBFOX1	99	75.616	ENSMALG00000003337	rbfox1	99	75.616	Monopterus_albus
ENSAPLG00000013263	RBFOX1	97	93.830	MGP_CAROLIEiJ_G0020427	Rbfox1	98	93.830	Mus_caroli
ENSAPLG00000013263	RBFOX1	98	93.350	ENSMUSG00000008658	Rbfox1	98	93.573	Mus_musculus
ENSAPLG00000013263	RBFOX1	97	93.830	MGP_PahariEiJ_G0016135	Rbfox1	98	93.830	Mus_pahari
ENSAPLG00000013263	RBFOX1	97	93.316	MGP_SPRETEiJ_G0021321	Rbfox1	98	93.316	Mus_spretus
ENSAPLG00000013263	RBFOX1	83	93.093	ENSMPUG00000014822	RBFOX1	85	93.093	Mustela_putorius_furo
ENSAPLG00000013263	RBFOX1	77	95.765	ENSMLUG00000015896	RBFOX1	100	95.765	Myotis_lucifugus
ENSAPLG00000013263	RBFOX1	98	93.862	ENSNGAG00000023276	Rbfox1	100	94.588	Nannospalax_galili
ENSAPLG00000013263	RBFOX1	98	61.446	ENSNBRG00000011084	rbfox1	94	61.446	Neolamprologus_brichardi
ENSAPLG00000013263	RBFOX1	98	92.347	ENSNLEG00000010017	-	94	92.347	Nomascus_leucogenys
ENSAPLG00000013263	RBFOX1	97	77.892	ENSMEUG00000012525	RBFOX1	93	77.892	Notamacropus_eugenii
ENSAPLG00000013263	RBFOX1	98	73.724	ENSOPRG00000006199	-	94	73.724	Ochotona_princeps
ENSAPLG00000013263	RBFOX1	97	93.573	ENSODEG00000013166	RBFOX1	98	93.573	Octodon_degus
ENSAPLG00000013263	RBFOX1	83	94.895	ENSOANG00000002379	RBFOX1	89	94.895	Ornithorhynchus_anatinus
ENSAPLG00000013263	RBFOX1	54	94.009	ENSOCUG00000001205	-	96	94.009	Oryctolagus_cuniculus
ENSAPLG00000013263	RBFOX1	97	94.344	ENSOGAG00000025535	RBFOX1	98	94.344	Otolemur_garnettii
ENSAPLG00000013263	RBFOX1	62	81.707	ENSOARG00000005135	RBFOX1	96	82.716	Ovis_aries
ENSAPLG00000013263	RBFOX1	97	94.845	ENSPPAG00000036238	-	100	94.845	Pan_paniscus
ENSAPLG00000013263	RBFOX1	98	92.602	ENSPPRG00000006546	RBFOX1	94	92.602	Panthera_pardus
ENSAPLG00000013263	RBFOX1	98	83.376	ENSPTIG00000021154	RBFOX1	100	82.143	Panthera_tigris_altaica
ENSAPLG00000013263	RBFOX1	98	92.602	ENSPTRG00000007744	RBFOX1	99	89.258	Pan_troglodytes
ENSAPLG00000013263	RBFOX1	98	92.602	ENSPANG00000026500	RBFOX1	94	92.602	Papio_anubis
ENSAPLG00000013263	RBFOX1	97	85.166	ENSPKIG00000009667	-	95	85.326	Paramormyrops_kingsleyae
ENSAPLG00000013263	RBFOX1	74	85.085	ENSPKIG00000019353	rbfox1	86	85.517	Paramormyrops_kingsleyae
ENSAPLG00000013263	RBFOX1	98	98.977	ENSPSIG00000006523	RBFOX1	98	98.977	Pelodiscus_sinensis
ENSAPLG00000013263	RBFOX1	97	93.830	ENSPEMG00000017607	Rbfox1	98	93.830	Peromyscus_maniculatus_bairdii
ENSAPLG00000013263	RBFOX1	73	93.448	ENSPCIG00000026887	RBFOX1	100	93.448	Phascolarctos_cinereus
ENSAPLG00000013263	RBFOX1	83	93.093	ENSPPYG00000007079	-	85	93.093	Pongo_abelii
ENSAPLG00000013263	RBFOX1	88	84.091	ENSPCAG00000002630	RBFOX1	93	84.091	Procavia_capensis
ENSAPLG00000013263	RBFOX1	98	92.092	ENSPCOG00000025687	RBFOX1	94	92.092	Propithecus_coquereli
ENSAPLG00000013263	RBFOX1	98	88.010	ENSPVAG00000013467	RBFOX1	94	88.010	Pteropus_vampyrus
ENSAPLG00000013263	RBFOX1	94	82.323	ENSPNAG00000023109	rbfox1	100	82.323	Pygocentrus_nattereri
ENSAPLG00000013263	RBFOX1	98	93.606	ENSRNOG00000002827	Rbfox1	94	93.606	Rattus_norvegicus
ENSAPLG00000013263	RBFOX1	97	94.845	ENSRBIG00000044478	RBFOX1	100	94.845	Rhinopithecus_bieti
ENSAPLG00000013263	RBFOX1	98	92.602	ENSRROG00000044411	RBFOX1	94	92.602	Rhinopithecus_roxellana
ENSAPLG00000013263	RBFOX1	98	94.373	ENSSBOG00000033726	RBFOX1	98	94.373	Saimiri_boliviensis_boliviensis
ENSAPLG00000013263	RBFOX1	98	92.112	ENSSHAG00000009257	RBFOX1	99	92.112	Sarcophilus_harrisii
ENSAPLG00000013263	RBFOX1	88	72.145	ENSSFOG00015009955	-	84	72.145	Scleropages_formosus
ENSAPLG00000013263	RBFOX1	99	68.828	ENSSFOG00015023675	rbfox1	99	68.828	Scleropages_formosus
ENSAPLG00000013263	RBFOX1	98	76.829	ENSSMAG00000015505	rbfox1	93	76.585	Scophthalmus_maximus
ENSAPLG00000013263	RBFOX1	98	74.430	ENSSDUG00000016413	rbfox1	100	73.804	Seriola_dumerili
ENSAPLG00000013263	RBFOX1	84	72.353	ENSSLDG00000009353	rbfox1	97	70.871	Seriola_lalandi_dorsalis
ENSAPLG00000013263	RBFOX1	84	83.529	ENSSPUG00000009732	RBFOX1	87	85.588	Sphenodon_punctatus
ENSAPLG00000013263	RBFOX1	97	76.847	ENSSPAG00000009723	rbfox1	100	76.601	Stegastes_partitus
ENSAPLG00000013263	RBFOX1	95	94.180	ENSSSCG00000007917	RBFOX1	91	94.180	Sus_scrofa
ENSAPLG00000013263	RBFOX1	97	99.486	ENSTGUG00000004562	RBFOX1	100	99.486	Taeniopygia_guttata
ENSAPLG00000013263	RBFOX1	98	76.167	ENSTRUG00000020940	rbfox1	99	76.167	Takifugu_rubripes
ENSAPLG00000013263	RBFOX1	67	57.325	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSAPLG00000013263	RBFOX1	77	70.779	ENSTBEG00000009169	-	74	70.779	Tupaia_belangeri
ENSAPLG00000013263	RBFOX1	98	92.092	ENSTTRG00000005700	RBFOX1	94	92.092	Tursiops_truncatus
ENSAPLG00000013263	RBFOX1	97	88.689	ENSUAMG00000024633	RBFOX1	99	88.747	Ursus_americanus
ENSAPLG00000013263	RBFOX1	98	80.051	ENSUMAG00000003579	RBFOX1	99	80.051	Ursus_maritimus
ENSAPLG00000013263	RBFOX1	77	92.857	ENSVPAG00000001284	RBFOX1	74	92.857	Vicugna_pacos
ENSAPLG00000013263	RBFOX1	98	94.656	ENSVVUG00000017311	RBFOX1	90	94.656	Vulpes_vulpes