EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000013639 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 36177 bases
Position: chrKB744020.1:437864-474040
Accession: 101798880
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013482	ResIII	PF04851.15	5.3e-12	1	1
ENSAPLP00000013482	DEAD	PF00270.29	5.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000014234	HFM1-201	4296	XM_005026527	ENSAPLP00000013482	1431 (aa)	-	U3J1V5

Gene Model

Click here to download ENSAPLG00000013639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000013639	HFM1	51	34.087	ENSAPLG00000012589	-	70	34.087
ENSAPLG00000013639	HFM1	56	32.073	ENSAPLG00000004313	SNRNP200	73	32.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013639	HFM1	100	60.301	ENSG00000162669	HFM1	100	60.301	Homo_sapiens
ENSAPLG00000013639	HFM1	59	66.112	ENSAPOG00000005304	hfm1	94	66.112	Acanthochromis_polyacanthus
ENSAPLG00000013639	HFM1	100	60.231	ENSAMEG00000000432	HFM1	100	60.231	Ailuropoda_melanoleuca
ENSAPLG00000013639	HFM1	71	60.794	ENSACIG00000021553	hfm1	92	60.794	Amphilophus_citrinellus
ENSAPLG00000013639	HFM1	59	66.746	ENSAOCG00000022839	hfm1	96	69.773	Amphiprion_ocellaris
ENSAPLG00000013639	HFM1	59	66.627	ENSAPEG00000014316	hfm1	96	69.949	Amphiprion_percula
ENSAPLG00000013639	HFM1	67	63.174	ENSATEG00000019181	hfm1	81	62.299	Anabas_testudineus
ENSAPLG00000013639	HFM1	100	59.394	ENSANAG00000029513	HFM1	100	59.394	Aotus_nancymaae
ENSAPLG00000013639	HFM1	65	64.547	ENSACLG00000009033	hfm1	97	65.114	Astatotilapia_calliptera
ENSAPLG00000013639	HFM1	66	64.959	ENSAMXG00000006108	hfm1	67	64.959	Astyanax_mexicanus
ENSAPLG00000013639	HFM1	100	60.370	ENSBTAG00000020856	HFM1	100	60.370	Bos_taurus
ENSAPLG00000013639	HFM1	100	59.795	ENSCJAG00000001843	HFM1	100	59.795	Callithrix_jacchus
ENSAPLG00000013639	HFM1	100	61.218	ENSCAFG00000020187	HFM1	100	61.218	Canis_familiaris
ENSAPLG00000013639	HFM1	100	60.521	ENSTSYG00000014250	HFM1	100	60.521	Carlito_syrichta
ENSAPLG00000013639	HFM1	99	58.607	ENSCPOG00000007421	HFM1	99	58.607	Cavia_porcellus
ENSAPLG00000013639	HFM1	100	59.753	ENSCCAG00000033206	HFM1	100	59.753	Cebus_capucinus
ENSAPLG00000013639	HFM1	100	60.082	ENSCATG00000030987	HFM1	100	60.082	Cercocebus_atys
ENSAPLG00000013639	HFM1	100	58.317	ENSCLAG00000005173	HFM1	99	58.317	Chinchilla_lanigera
ENSAPLG00000013639	HFM1	100	54.942	ENSCGRG00001016995	Hfm1	100	54.942	Cricetulus_griseus_chok1gshd
ENSAPLG00000013639	HFM1	100	57.974	ENSCGRG00000017181	Hfm1	100	57.974	Cricetulus_griseus_crigri
ENSAPLG00000013639	HFM1	71	59.130	ENSCSEG00000017659	hfm1	94	59.526	Cynoglossus_semilaevis
ENSAPLG00000013639	HFM1	50	68.377	ENSCVAG00000005075	hfm1	87	68.377	Cyprinodon_variegatus
ENSAPLG00000013639	HFM1	59	67.019	ENSDARG00000104288	hfm1	76	67.019	Danio_rerio
ENSAPLG00000013639	HFM1	100	57.465	ENSDNOG00000004776	HFM1	100	57.465	Dasypus_novemcinctus
ENSAPLG00000013639	HFM1	100	58.005	ENSDORG00000014661	Hfm1	100	58.005	Dipodomys_ordii
ENSAPLG00000013639	HFM1	71	72.266	ENSEASG00005015424	HFM1	98	72.266	Equus_asinus_asinus
ENSAPLG00000013639	HFM1	100	59.254	ENSECAG00000024039	HFM1	100	59.254	Equus_caballus
ENSAPLG00000013639	HFM1	63	67.215	ENSELUG00000018944	hfm1	97	67.215	Esox_lucius
ENSAPLG00000013639	HFM1	100	60.971	ENSFCAG00000029116	HFM1	100	60.971	Felis_catus
ENSAPLG00000013639	HFM1	100	74.712	ENSFALG00000001781	HFM1	100	75.375	Ficedula_albicollis
ENSAPLG00000013639	HFM1	100	58.045	ENSFDAG00000020816	HFM1	100	58.045	Fukomys_damarensis
ENSAPLG00000013639	HFM1	66	61.100	ENSGMOG00000017436	hfm1	100	61.100	Gadus_morhua
ENSAPLG00000013639	HFM1	71	60.815	ENSGAFG00000018093	hfm1	92	66.465	Gambusia_affinis
ENSAPLG00000013639	HFM1	66	61.244	ENSGACG00000015686	hfm1	99	61.244	Gasterosteus_aculeatus
ENSAPLG00000013639	HFM1	100	60.164	ENSGGOG00000038524	HFM1	100	60.164	Gorilla_gorilla
ENSAPLG00000013639	HFM1	65	65.625	ENSHBUG00000007309	hfm1	95	61.785	Haplochromis_burtoni
ENSAPLG00000013639	HFM1	57	64.216	ENSHCOG00000019632	hfm1	97	64.216	Hippocampus_comes
ENSAPLG00000013639	HFM1	65	64.974	ENSIPUG00000017020	hfm1	93	65.344	Ictalurus_punctatus
ENSAPLG00000013639	HFM1	100	58.666	ENSJJAG00000017198	Hfm1	100	58.666	Jaculus_jaculus
ENSAPLG00000013639	HFM1	62	62.942	ENSKMAG00000002282	hfm1	90	62.942	Kryptolebias_marmoratus
ENSAPLG00000013639	HFM1	71	60.176	ENSLBEG00000006759	hfm1	96	65.238	Labrus_bergylta
ENSAPLG00000013639	HFM1	66	70.504	ENSLACG00000010698	HFM1	100	66.291	Latimeria_chalumnae
ENSAPLG00000013639	HFM1	72	63.454	ENSLOCG00000004931	hfm1	96	63.550	Lepisosteus_oculatus
ENSAPLG00000013639	HFM1	51	78.099	ENSLAFG00000015903	-	97	78.099	Loxodonta_africana
ENSAPLG00000013639	HFM1	100	58.010	ENSMFAG00000003649	HFM1	100	58.010	Macaca_fascicularis
ENSAPLG00000013639	HFM1	100	60.000	ENSMMUG00000006819	HFM1	100	60.000	Macaca_mulatta
ENSAPLG00000013639	HFM1	54	70.128	ENSMAMG00000004623	hfm1	97	66.104	Mastacembelus_armatus
ENSAPLG00000013639	HFM1	65	64.270	ENSMZEG00005004679	hfm1	97	65.114	Maylandia_zebra
ENSAPLG00000013639	HFM1	55	90.689	ENSMGAG00000008437	HFM1	97	90.689	Meleagris_gallopavo
ENSAPLG00000013639	HFM1	100	57.945	ENSMAUG00000018858	Hfm1	100	58.089	Mesocricetus_auratus
ENSAPLG00000013639	HFM1	100	58.880	ENSMICG00000037935	HFM1	100	58.880	Microcebus_murinus
ENSAPLG00000013639	HFM1	100	56.821	ENSMOCG00000014812	Hfm1	100	56.646	Microtus_ochrogaster
ENSAPLG00000013639	HFM1	62	64.045	ENSMMOG00000006148	hfm1	95	64.269	Mola_mola
ENSAPLG00000013639	HFM1	65	64.839	ENSMALG00000002401	hfm1	98	64.971	Monopterus_albus
ENSAPLG00000013639	HFM1	95	56.488	MGP_CAROLIEiJ_G0027496	Hfm1	100	56.488	Mus_caroli
ENSAPLG00000013639	HFM1	100	57.729	ENSMUSG00000043410	Hfm1	100	57.729	Mus_musculus
ENSAPLG00000013639	HFM1	100	57.869	MGP_PahariEiJ_G0017268	Hfm1	100	58.036	Mus_pahari
ENSAPLG00000013639	HFM1	100	57.798	MGP_SPRETEiJ_G0028495	Hfm1	100	57.798	Mus_spretus
ENSAPLG00000013639	HFM1	100	58.433	ENSMPUG00000004594	HFM1	100	58.433	Mustela_putorius_furo
ENSAPLG00000013639	HFM1	100	59.401	ENSMLUG00000010200	HFM1	100	59.401	Myotis_lucifugus
ENSAPLG00000013639	HFM1	65	61.249	ENSNBRG00000002910	hfm1	97	65.175	Neolamprologus_brichardi
ENSAPLG00000013639	HFM1	100	57.133	ENSNLEG00000010285	HFM1	100	57.133	Nomascus_leucogenys
ENSAPLG00000013639	HFM1	77	64.154	ENSMEUG00000015788	HFM1	77	64.154	Notamacropus_eugenii
ENSAPLG00000013639	HFM1	83	66.983	ENSOPRG00000013916	HFM1	82	66.983	Ochotona_princeps
ENSAPLG00000013639	HFM1	68	63.479	ENSONIG00000010590	hfm1	99	60.952	Oreochromis_niloticus
ENSAPLG00000013639	HFM1	57	64.619	ENSORLG00000026844	hfm1	99	64.619	Oryzias_latipes
ENSAPLG00000013639	HFM1	68	54.819	ENSORLG00020002951	hfm1	79	54.536	Oryzias_latipes_hni
ENSAPLG00000013639	HFM1	68	62.245	ENSOMEG00000016474	hfm1	68	62.245	Oryzias_melastigma
ENSAPLG00000013639	HFM1	85	65.403	ENSOGAG00000032369	HFM1	99	65.403	Otolemur_garnettii
ENSAPLG00000013639	HFM1	100	60.397	ENSOARG00000015812	HFM1	100	60.397	Ovis_aries
ENSAPLG00000013639	HFM1	91	64.145	ENSPPAG00000024582	HFM1	98	64.145	Pan_paniscus
ENSAPLG00000013639	HFM1	100	60.902	ENSPPRG00000003270	HFM1	100	60.902	Panthera_pardus
ENSAPLG00000013639	HFM1	100	60.834	ENSPTIG00000018881	HFM1	100	60.834	Panthera_tigris_altaica
ENSAPLG00000013639	HFM1	100	60.507	ENSPTRG00000000948	HFM1	100	60.507	Pan_troglodytes
ENSAPLG00000013639	HFM1	100	60.014	ENSPANG00000009838	HFM1	100	60.014	Papio_anubis
ENSAPLG00000013639	HFM1	62	67.869	ENSPKIG00000003810	hfm1	95	68.034	Paramormyrops_kingsleyae
ENSAPLG00000013639	HFM1	58	64.656	ENSPMGG00000011059	hfm1	100	64.656	Periophthalmus_magnuspinnatus
ENSAPLG00000013639	HFM1	100	59.247	ENSPEMG00000022852	Hfm1	100	59.247	Peromyscus_maniculatus_bairdii
ENSAPLG00000013639	HFM1	100	57.447	ENSPCIG00000014233	HFM1	100	57.447	Phascolarctos_cinereus
ENSAPLG00000013639	HFM1	71	60.379	ENSPFOG00000017194	hfm1	100	60.626	Poecilia_formosa
ENSAPLG00000013639	HFM1	71	61.859	ENSPLAG00000000571	hfm1	92	61.859	Poecilia_latipinna
ENSAPLG00000013639	HFM1	71	61.390	ENSPMEG00000019475	hfm1	93	61.390	Poecilia_mexicana
ENSAPLG00000013639	HFM1	71	61.306	ENSPREG00000007803	hfm1	95	64.353	Poecilia_reticulata
ENSAPLG00000013639	HFM1	100	60.233	ENSPPYG00000001163	HFM1	100	60.233	Pongo_abelii
ENSAPLG00000013639	HFM1	57	65.823	ENSPCAG00000004289	-	57	65.823	Procavia_capensis
ENSAPLG00000013639	HFM1	100	55.571	ENSPVAG00000009713	HFM1	100	55.571	Pteropus_vampyrus
ENSAPLG00000013639	HFM1	65	64.440	ENSPNYG00000001795	hfm1	96	65.191	Pundamilia_nyererei
ENSAPLG00000013639	HFM1	59	67.176	ENSPNAG00000010865	hfm1	84	67.176	Pygocentrus_nattereri
ENSAPLG00000013639	HFM1	100	57.609	ENSRNOG00000023299	Hfm1	100	57.609	Rattus_norvegicus
ENSAPLG00000013639	HFM1	100	60.082	ENSRROG00000045569	HFM1	100	60.082	Rhinopithecus_roxellana
ENSAPLG00000013639	HFM1	100	58.836	ENSSBOG00000027456	HFM1	100	58.836	Saimiri_boliviensis_boliviensis
ENSAPLG00000013639	HFM1	59	62.073	ENSSHAG00000014616	-	98	62.073	Sarcophilus_harrisii
ENSAPLG00000013639	HFM1	68	65.065	ENSSFOG00015020129	hfm1	66	65.065	Scleropages_formosus
ENSAPLG00000013639	HFM1	62	66.293	ENSSMAG00000006907	hfm1	87	66.293	Scophthalmus_maximus
ENSAPLG00000013639	HFM1	58	66.345	ENSSDUG00000011424	hfm1	93	66.345	Seriola_dumerili
ENSAPLG00000013639	HFM1	58	66.587	ENSSLDG00000016386	hfm1	92	66.587	Seriola_lalandi_dorsalis
ENSAPLG00000013639	HFM1	64	62.061	ENSSPAG00000001023	hfm1	96	64.896	Stegastes_partitus
ENSAPLG00000013639	HFM1	100	57.964	ENSSSCG00000006912	HFM1	98	61.550	Sus_scrofa
ENSAPLG00000013639	HFM1	66	88.598	ENSTGUG00000006172	HFM1	99	88.598	Taeniopygia_guttata
ENSAPLG00000013639	HFM1	90	63.853	ENSTTRG00000013933	HFM1	91	63.853	Tursiops_truncatus
ENSAPLG00000013639	HFM1	93	62.500	ENSVPAG00000011331	HFM1	93	62.500	Vicugna_pacos
ENSAPLG00000013639	HFM1	70	71.277	ENSVVUG00000020760	HFM1	99	71.277	Vulpes_vulpes
ENSAPLG00000013639	HFM1	59	65.680	ENSXMAG00000004178	hfm1	93	65.680	Xiphophorus_maculatus