EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000013869 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 45689 bases
Position: chrKB743395.1:678460-724148
Accession: 101794687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013750	XRN_N	PF03159.18	3.3e-94	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000014515	XRN2-201	2778	XM_005022639	ENSAPLP00000013750	925 (aa)	-	U3J2M3

Gene Model

Click here to download ENSAPLG00000013869's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03008	Ribosome biogenesis in eukaryotes	KEGG
apla03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013869	XRN2	99	83.333	ENSG00000088930	XRN2	97	82.885	Homo_sapiens
ENSAPLG00000013869	XRN2	97	70.801	ENSAPOG00000009818	xrn2	98	69.592	Acanthochromis_polyacanthus
ENSAPLG00000013869	XRN2	99	83.746	ENSAMEG00000012581	XRN2	97	83.315	Ailuropoda_melanoleuca
ENSAPLG00000013869	XRN2	90	70.292	ENSACIG00000015047	xrn2	90	75.050	Amphilophus_citrinellus
ENSAPLG00000013869	XRN2	97	71.319	ENSAOCG00000023632	xrn2	98	70.010	Amphiprion_ocellaris
ENSAPLG00000013869	XRN2	97	71.131	ENSAPEG00000014871	xrn2	98	69.906	Amphiprion_percula
ENSAPLG00000013869	XRN2	90	74.377	ENSATEG00000001273	xrn2	95	70.748	Anabas_testudineus
ENSAPLG00000013869	XRN2	100	84.632	ENSACAG00000005565	XRN2	97	84.632	Anolis_carolinensis
ENSAPLG00000013869	XRN2	99	83.638	ENSANAG00000020126	XRN2	97	83.208	Aotus_nancymaae
ENSAPLG00000013869	XRN2	90	72.619	ENSACLG00000010522	xrn2	77	97.333	Astatotilapia_calliptera
ENSAPLG00000013869	XRN2	100	71.233	ENSAMXG00000018301	xrn2	98	71.233	Astyanax_mexicanus
ENSAPLG00000013869	XRN2	99	82.777	ENSBTAG00000011304	XRN2	100	82.242	Bos_taurus
ENSAPLG00000013869	XRN2	86	54.644	WBGene00006964	xrn-2	85	54.350	Caenorhabditis_elegans
ENSAPLG00000013869	XRN2	99	83.423	ENSCJAG00000005611	XRN2	97	82.992	Callithrix_jacchus
ENSAPLG00000013869	XRN2	100	83.888	ENSCAFG00000005185	XRN2	98	83.459	Canis_familiaris
ENSAPLG00000013869	XRN2	99	84.069	ENSCAFG00020027479	XRN2	97	83.638	Canis_lupus_dingo
ENSAPLG00000013869	XRN2	99	82.777	ENSCHIG00000006921	XRN2	97	82.347	Capra_hircus
ENSAPLG00000013869	XRN2	99	82.885	ENSTSYG00000008315	XRN2	97	82.454	Carlito_syrichta
ENSAPLG00000013869	XRN2	99	71.214	ENSCAPG00000010773	XRN2	99	69.925	Cavia_aperea
ENSAPLG00000013869	XRN2	99	83.854	ENSCPOG00000009407	XRN2	97	83.423	Cavia_porcellus
ENSAPLG00000013869	XRN2	99	83.531	ENSCATG00000040350	XRN2	97	83.100	Cercocebus_atys
ENSAPLG00000013869	XRN2	99	84.284	ENSCLAG00000013419	XRN2	97	83.854	Chinchilla_lanigera
ENSAPLG00000013869	XRN2	99	83.531	ENSCSAG00000011094	XRN2	97	83.100	Chlorocebus_sabaeus
ENSAPLG00000013869	XRN2	70	93.548	ENSCHOG00000013404	XRN2	70	93.548	Choloepus_hoffmanni
ENSAPLG00000013869	XRN2	99	88.532	ENSCPBG00000023533	XRN2	99	88.853	Chrysemys_picta_bellii
ENSAPLG00000013869	XRN2	86	59.433	ENSCING00000022336	-	97	59.926	Ciona_intestinalis
ENSAPLG00000013869	XRN2	79	68.059	ENSCSAVG00000011217	-	95	61.355	Ciona_savignyi
ENSAPLG00000013869	XRN2	99	83.531	ENSCANG00000040240	XRN2	97	83.100	Colobus_angolensis_palliatus
ENSAPLG00000013869	XRN2	98	83.736	ENSCGRG00001010676	Xrn2	97	83.736	Cricetulus_griseus_chok1gshd
ENSAPLG00000013869	XRN2	99	83.244	ENSCGRG00000006378	Xrn2	99	82.814	Cricetulus_griseus_crigri
ENSAPLG00000013869	XRN2	52	73.196	ENSCSEG00000005628	xrn2	95	73.196	Cynoglossus_semilaevis
ENSAPLG00000013869	XRN2	90	71.145	ENSCVAG00000018999	xrn2	93	77.154	Cyprinodon_variegatus
ENSAPLG00000013869	XRN2	100	70.688	ENSDARG00000101900	xrn2	92	79.879	Danio_rerio
ENSAPLG00000013869	XRN2	99	83.315	ENSDNOG00000001895	XRN2	97	82.885	Dasypus_novemcinctus
ENSAPLG00000013869	XRN2	99	82.347	ENSDORG00000005434	Xrn2	97	81.916	Dipodomys_ordii
ENSAPLG00000013869	XRN2	85	55.654	FBgn0031868	Rat1	85	55.266	Drosophila_melanogaster
ENSAPLG00000013869	XRN2	99	73.060	ENSETEG00000001740	XRN2	97	72.198	Echinops_telfairi
ENSAPLG00000013869	XRN2	84	71.410	ENSEBUG00000016136	xrn2	99	71.410	Eptatretus_burgeri
ENSAPLG00000013869	XRN2	99	83.423	ENSEASG00005002484	XRN2	97	82.992	Equus_asinus_asinus
ENSAPLG00000013869	XRN2	99	83.369	ENSECAG00000018988	XRN2	97	81.501	Equus_caballus
ENSAPLG00000013869	XRN2	80	78.418	ENSEEUG00000009265	XRN2	73	78.418	Erinaceus_europaeus
ENSAPLG00000013869	XRN2	100	68.116	ENSELUG00000000552	xrn2	96	71.245	Esox_lucius
ENSAPLG00000013869	XRN2	99	83.638	ENSFCAG00000007970	XRN2	97	83.208	Felis_catus
ENSAPLG00000013869	XRN2	100	94.600	ENSFALG00000004508	XRN2	97	94.600	Ficedula_albicollis
ENSAPLG00000013869	XRN2	99	83.854	ENSFDAG00000016311	XRN2	97	83.423	Fukomys_damarensis
ENSAPLG00000013869	XRN2	52	70.281	ENSFHEG00000013039	xrn2	93	70.281	Fundulus_heteroclitus
ENSAPLG00000013869	XRN2	86	74.593	ENSGMOG00000013436	xrn2	97	74.593	Gadus_morhua
ENSAPLG00000013869	XRN2	100	96.649	ENSGALG00000008372	XRN2	97	96.649	Gallus_gallus
ENSAPLG00000013869	XRN2	90	73.547	ENSGAFG00000014284	xrn2	96	73.547	Gambusia_affinis
ENSAPLG00000013869	XRN2	87	74.938	ENSGACG00000011870	xrn2	97	74.938	Gasterosteus_aculeatus
ENSAPLG00000013869	XRN2	99	88.639	ENSGAGG00000004884	XRN2	97	88.960	Gopherus_agassizii
ENSAPLG00000013869	XRN2	99	83.531	ENSGGOG00000013738	XRN2	97	83.100	Gorilla_gorilla
ENSAPLG00000013869	XRN2	53	73.535	ENSHBUG00000005077	xrn2	77	97.333	Haplochromis_burtoni
ENSAPLG00000013869	XRN2	99	82.885	ENSHGLG00000014831	XRN2	97	82.347	Heterocephalus_glaber_female
ENSAPLG00000013869	XRN2	99	82.885	ENSHGLG00100013130	XRN2	97	82.347	Heterocephalus_glaber_male
ENSAPLG00000013869	XRN2	99	67.391	ENSHCOG00000011994	xrn2	95	69.403	Hippocampus_comes
ENSAPLG00000013869	XRN2	100	69.896	ENSIPUG00000006639	xrn2	98	69.896	Ictalurus_punctatus
ENSAPLG00000013869	XRN2	99	84.069	ENSSTOG00000000589	XRN2	97	83.638	Ictidomys_tridecemlineatus
ENSAPLG00000013869	XRN2	99	83.423	ENSJJAG00000022128	Xrn2	97	82.992	Jaculus_jaculus
ENSAPLG00000013869	XRN2	52	81.520	ENSLBEG00000010041	xrn2	95	81.520	Labrus_bergylta
ENSAPLG00000013869	XRN2	96	76.575	ENSLACG00000008307	XRN2	97	80.299	Latimeria_chalumnae
ENSAPLG00000013869	XRN2	99	72.258	ENSLOCG00000016874	xrn2	93	77.387	Lepisosteus_oculatus
ENSAPLG00000013869	XRN2	99	82.885	ENSLAFG00000014624	XRN2	97	82.454	Loxodonta_africana
ENSAPLG00000013869	XRN2	99	83.531	ENSMFAG00000038122	XRN2	97	83.100	Macaca_fascicularis
ENSAPLG00000013869	XRN2	99	83.531	ENSMMUG00000011405	XRN2	97	83.100	Macaca_mulatta
ENSAPLG00000013869	XRN2	99	83.638	ENSMNEG00000040626	XRN2	97	83.208	Macaca_nemestrina
ENSAPLG00000013869	XRN2	99	83.423	ENSMLEG00000041897	XRN2	97	82.992	Mandrillus_leucophaeus
ENSAPLG00000013869	XRN2	90	75.329	ENSMAMG00000008633	xrn2	93	72.179	Mastacembelus_armatus
ENSAPLG00000013869	XRN2	90	74.643	ENSMZEG00005022362	xrn2	94	74.643	Maylandia_zebra
ENSAPLG00000013869	XRN2	99	94.731	ENSMGAG00000003196	XRN2	95	96.476	Meleagris_gallopavo
ENSAPLG00000013869	XRN2	99	83.854	ENSMAUG00000021842	Xrn2	97	83.423	Mesocricetus_auratus
ENSAPLG00000013869	XRN2	99	82.885	ENSMICG00000008126	XRN2	97	82.454	Microcebus_murinus
ENSAPLG00000013869	XRN2	99	83.944	ENSMOCG00000012588	Xrn2	97	83.513	Microtus_ochrogaster
ENSAPLG00000013869	XRN2	90	73.888	ENSMMOG00000017576	xrn2	94	73.888	Mola_mola
ENSAPLG00000013869	XRN2	99	84.341	ENSMODG00000006163	XRN2	97	84.341	Monodelphis_domestica
ENSAPLG00000013869	XRN2	91	72.769	ENSMALG00000011355	xrn2	97	72.769	Monopterus_albus
ENSAPLG00000013869	XRN2	99	83.190	MGP_CAROLIEiJ_G0024400	Xrn2	97	82.759	Mus_caroli
ENSAPLG00000013869	XRN2	99	83.405	ENSMUSG00000027433	Xrn2	97	82.974	Mus_musculus
ENSAPLG00000013869	XRN2	100	83.118	MGP_PahariEiJ_G0025843	Xrn2	97	82.688	Mus_pahari
ENSAPLG00000013869	XRN2	99	83.405	MGP_SPRETEiJ_G0025318	Xrn2	97	82.974	Mus_spretus
ENSAPLG00000013869	XRN2	99	82.347	ENSMPUG00000001198	XRN2	91	81.924	Mustela_putorius_furo
ENSAPLG00000013869	XRN2	99	83.531	ENSMLUG00000001536	XRN2	97	83.100	Myotis_lucifugus
ENSAPLG00000013869	XRN2	99	83.961	ENSNGAG00000018138	Xrn2	97	83.531	Nannospalax_galili
ENSAPLG00000013869	XRN2	90	75.149	ENSNBRG00000008062	xrn2	77	97.333	Neolamprologus_brichardi
ENSAPLG00000013869	XRN2	99	83.423	ENSNLEG00000009991	XRN2	97	82.992	Nomascus_leucogenys
ENSAPLG00000013869	XRN2	68	95.556	ENSMEUG00000008622	-	67	95.556	Notamacropus_eugenii
ENSAPLG00000013869	XRN2	77	75.263	ENSOPRG00000001397	-	77	75.263	Ochotona_princeps
ENSAPLG00000013869	XRN2	99	84.069	ENSODEG00000010745	-	97	83.638	Octodon_degus
ENSAPLG00000013869	XRN2	99	76.144	ENSODEG00000000860	-	97	76.788	Octodon_degus
ENSAPLG00000013869	XRN2	100	69.101	ENSONIG00000018720	xrn2	98	70.476	Oreochromis_niloticus
ENSAPLG00000013869	XRN2	99	84.375	ENSOANG00000015673	XRN2	97	84.375	Ornithorhynchus_anatinus
ENSAPLG00000013869	XRN2	99	83.746	ENSOCUG00000013468	XRN2	97	83.315	Oryctolagus_cuniculus
ENSAPLG00000013869	XRN2	96	70.000	ENSORLG00000017213	xrn2	94	74.286	Oryzias_latipes
ENSAPLG00000013869	XRN2	96	70.187	ENSORLG00020001824	xrn2	94	70.957	Oryzias_latipes_hni
ENSAPLG00000013869	XRN2	96	69.967	ENSORLG00015019747	xrn2	94	70.737	Oryzias_latipes_hsok
ENSAPLG00000013869	XRN2	90	74.167	ENSOMEG00000019820	xrn2	98	69.062	Oryzias_melastigma
ENSAPLG00000013869	XRN2	100	82.833	ENSOGAG00000001068	XRN2	97	82.403	Otolemur_garnettii
ENSAPLG00000013869	XRN2	99	82.670	ENSOARG00000004443	XRN2	99	82.239	Ovis_aries
ENSAPLG00000013869	XRN2	99	83.531	ENSPPAG00000033549	XRN2	97	83.100	Pan_paniscus
ENSAPLG00000013869	XRN2	99	83.638	ENSPPRG00000008732	XRN2	97	83.208	Panthera_pardus
ENSAPLG00000013869	XRN2	99	83.638	ENSPTIG00000015683	XRN2	97	83.208	Panthera_tigris_altaica
ENSAPLG00000013869	XRN2	99	83.531	ENSPTRG00000013308	XRN2	97	83.100	Pan_troglodytes
ENSAPLG00000013869	XRN2	99	83.531	ENSPANG00000018088	XRN2	97	83.100	Papio_anubis
ENSAPLG00000013869	XRN2	100	71.744	ENSPKIG00000016889	xrn2	98	71.744	Paramormyrops_kingsleyae
ENSAPLG00000013869	XRN2	83	90.104	ENSPSIG00000014666	XRN2	100	90.104	Pelodiscus_sinensis
ENSAPLG00000013869	XRN2	99	83.100	ENSPEMG00000000111	Xrn2	97	82.670	Peromyscus_maniculatus_bairdii
ENSAPLG00000013869	XRN2	100	68.856	ENSPFOG00000004182	xrn2	94	70.724	Poecilia_formosa
ENSAPLG00000013869	XRN2	90	74.021	ENSPLAG00000007351	xrn2	94	74.021	Poecilia_latipinna
ENSAPLG00000013869	XRN2	97	68.490	ENSPMEG00000011798	xrn2	97	70.191	Poecilia_mexicana
ENSAPLG00000013869	XRN2	90	74.052	ENSPREG00000012452	xrn2	96	72.811	Poecilia_reticulata
ENSAPLG00000013869	XRN2	99	83.100	ENSPPYG00000010755	XRN2	97	82.670	Pongo_abelii
ENSAPLG00000013869	XRN2	99	78.840	ENSPCAG00000011191	XRN2	97	78.410	Procavia_capensis
ENSAPLG00000013869	XRN2	99	75.996	ENSPCOG00000016468	XRN2	97	75.565	Propithecus_coquereli
ENSAPLG00000013869	XRN2	92	74.144	ENSPVAG00000004596	XRN2	90	74.144	Pteropus_vampyrus
ENSAPLG00000013869	XRN2	90	72.619	ENSPNYG00000001765	xrn2	94	72.619	Pundamilia_nyererei
ENSAPLG00000013869	XRN2	100	71.144	ENSPNAG00000010956	xrn2	97	71.144	Pygocentrus_nattereri
ENSAPLG00000013869	XRN2	99	83.423	ENSRNOG00000011785	Xrn2	97	82.992	Rattus_norvegicus
ENSAPLG00000013869	XRN2	86	87.406	ENSRBIG00000036193	XRN2	97	87.406	Rhinopithecus_bieti
ENSAPLG00000013869	XRN2	99	83.531	ENSRROG00000044400	XRN2	88	83.100	Rhinopithecus_roxellana
ENSAPLG00000013869	XRN2	68	51.079	YOR048C	RAT1	64	53.093	Saccharomyces_cerevisiae
ENSAPLG00000013869	XRN2	99	83.531	ENSSBOG00000021014	XRN2	97	83.100	Saimiri_boliviensis_boliviensis
ENSAPLG00000013869	XRN2	100	72.698	ENSSFOG00015001091	xrn2	98	72.698	Scleropages_formosus
ENSAPLG00000013869	XRN2	90	74.881	ENSSMAG00000007834	xrn2	94	70.215	Scophthalmus_maximus
ENSAPLG00000013869	XRN2	90	72.033	ENSSDUG00000012802	xrn2	96	72.033	Seriola_dumerili
ENSAPLG00000013869	XRN2	90	74.790	ENSSLDG00000021273	xrn2	95	74.790	Seriola_lalandi_dorsalis
ENSAPLG00000013869	XRN2	76	86.486	ENSSARG00000005859	-	74	86.486	Sorex_araneus
ENSAPLG00000013869	XRN2	98	81.778	ENSSPUG00000005485	XRN2	93	81.998	Sphenodon_punctatus
ENSAPLG00000013869	XRN2	100	70.157	ENSSPAG00000016027	xrn2	97	70.557	Stegastes_partitus
ENSAPLG00000013869	XRN2	99	82.670	ENSSSCG00000007109	XRN2	97	82.239	Sus_scrofa
ENSAPLG00000013869	XRN2	100	93.211	ENSTGUG00000007535	XRN2	97	93.211	Taeniopygia_guttata
ENSAPLG00000013869	XRN2	100	67.427	ENSTRUG00000015489	xrn2	91	70.490	Takifugu_rubripes
ENSAPLG00000013869	XRN2	100	69.231	ENSTNIG00000010712	xrn2	95	70.044	Tetraodon_nigroviridis
ENSAPLG00000013869	XRN2	99	82.992	ENSTBEG00000004119	XRN2	97	82.562	Tupaia_belangeri
ENSAPLG00000013869	XRN2	93	88.113	ENSTTRG00000009087	XRN2	90	88.113	Tursiops_truncatus
ENSAPLG00000013869	XRN2	99	83.854	ENSUAMG00000024634	XRN2	97	83.423	Ursus_americanus
ENSAPLG00000013869	XRN2	99	83.638	ENSUMAG00000004012	XRN2	95	83.208	Ursus_maritimus
ENSAPLG00000013869	XRN2	91	77.739	ENSVPAG00000010694	XRN2	91	77.267	Vicugna_pacos
ENSAPLG00000013869	XRN2	99	84.069	ENSVVUG00000012178	XRN2	97	83.638	Vulpes_vulpes
ENSAPLG00000013869	XRN2	99	74.651	ENSXETG00000023501	xrn2	97	74.651	Xenopus_tropicalis
ENSAPLG00000013869	XRN2	100	68.326	ENSXMAG00000000242	xrn2	87	79.328	Xiphophorus_maculatus