EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000013914 (Gene tree)
Gene ID: -
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 66405 bases
Position: chrKB744498.1:132509-198913
Accession: 101793853
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013816	R3H	PF01424.22	1.1e-06	1	1
ENSAPLP00000013816	RNA_bind	PF08675.11	1.3e-33	1	1
ENSAPLP00000013816	CAF1	PF04857.20	5.3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000014581	PARN-201	2396	XM_005028637	ENSAPLP00000013816	636 (aa)	XP_005028695	U3J2T9

Gene Model

Click here to download ENSAPLG00000013914's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013914	PARN	99	84.858	ENSG00000140694	PARN	99	87.037	Homo_sapiens
ENSAPLG00000013914	PARN	99	82.418	ENSAMEG00000011208	PARN	99	82.418	Ailuropoda_melanoleuca
ENSAPLG00000013914	PARN	87	73.741	ENSACIG00000000619	parn	86	73.201	Amphilophus_citrinellus
ENSAPLG00000013914	PARN	90	73.356	ENSAOCG00000003465	parn	82	73.010	Amphiprion_ocellaris
ENSAPLG00000013914	PARN	74	77.590	ENSAPEG00000010661	parn	91	77.167	Amphiprion_percula
ENSAPLG00000013914	PARN	90	74.655	ENSATEG00000004661	parn	83	74.138	Anabas_testudineus
ENSAPLG00000013914	PARN	90	85.986	ENSACAG00000004973	PARN	99	80.000	Anolis_carolinensis
ENSAPLG00000013914	PARN	99	84.069	ENSANAG00000031516	PARN	99	87.037	Aotus_nancymaae
ENSAPLG00000013914	PARN	91	74.483	ENSACLG00000004742	parn	83	73.966	Astatotilapia_calliptera
ENSAPLG00000013914	PARN	90	73.647	ENSAMXG00000012390	parn	92	72.600	Astyanax_mexicanus
ENSAPLG00000013914	PARN	99	80.727	ENSBTAG00000018097	PARN	100	83.362	Bos_taurus
ENSAPLG00000013914	PARN	99	84.700	ENSCJAG00000015866	PARN	99	87.037	Callithrix_jacchus
ENSAPLG00000013914	PARN	99	82.622	ENSCAFG00000018795	PARN	99	82.622	Canis_familiaris
ENSAPLG00000013914	PARN	99	82.622	ENSCAFG00020024126	PARN	99	82.622	Canis_lupus_dingo
ENSAPLG00000013914	PARN	99	83.412	ENSCHIG00000018143	PARN	99	83.412	Capra_hircus
ENSAPLG00000013914	PARN	74	60.455	ENSCAPG00000007984	PARN	78	59.875	Cavia_aperea
ENSAPLG00000013914	PARN	99	81.962	ENSCPOG00000002263	PARN	99	81.962	Cavia_porcellus
ENSAPLG00000013914	PARN	99	84.227	ENSCCAG00000030367	PARN	99	87.037	Cebus_capucinus
ENSAPLG00000013914	PARN	91	91.189	ENSCATG00000041368	PARN	99	93.846	Cercocebus_atys
ENSAPLG00000013914	PARN	51	38.129	ENSCATG00000033196	PNLDC1	69	38.129	Cercocebus_atys
ENSAPLG00000013914	PARN	99	82.911	ENSCLAG00000015406	PARN	99	82.911	Chinchilla_lanigera
ENSAPLG00000013914	PARN	99	85.016	ENSCSAG00000008142	PARN	99	85.016	Chlorocebus_sabaeus
ENSAPLG00000013914	PARN	99	68.304	ENSCHOG00000007014	PARN	100	68.304	Choloepus_hoffmanni
ENSAPLG00000013914	PARN	88	90.731	ENSCPBG00000006609	PARN	97	90.731	Chrysemys_picta_bellii
ENSAPLG00000013914	PARN	80	43.503	ENSCING00000010142	-	99	43.421	Ciona_intestinalis
ENSAPLG00000013914	PARN	99	73.953	ENSCANG00000028849	-	99	87.037	Colobus_angolensis_palliatus
ENSAPLG00000013914	PARN	99	79.180	ENSCGRG00001012096	Parn	99	79.180	Cricetulus_griseus_chok1gshd
ENSAPLG00000013914	PARN	99	79.180	ENSCGRG00000004939	Parn	99	79.180	Cricetulus_griseus_crigri
ENSAPLG00000013914	PARN	90	71.354	ENSCSEG00000002064	parn	97	62.791	Cynoglossus_semilaevis
ENSAPLG00000013914	PARN	90	72.664	ENSCVAG00000014848	parn	82	72.318	Cyprinodon_variegatus
ENSAPLG00000013914	PARN	89	70.928	ENSDARG00000102634	parn	97	61.111	Danio_rerio
ENSAPLG00000013914	PARN	99	84.409	ENSDNOG00000000833	PARN	97	88.566	Dasypus_novemcinctus
ENSAPLG00000013914	PARN	65	84.884	ENSETEG00000014828	-	68	84.884	Echinops_telfairi
ENSAPLG00000013914	PARN	55	52.113	ENSEBUG00000007052	PARN	98	56.740	Eptatretus_burgeri
ENSAPLG00000013914	PARN	99	83.254	ENSEASG00005011400	PARN	99	83.254	Equus_asinus_asinus
ENSAPLG00000013914	PARN	99	82.938	ENSECAG00000017792	PARN	99	82.938	Equus_caballus
ENSAPLG00000013914	PARN	85	76.303	ENSEEUG00000010370	PARN	85	76.303	Erinaceus_europaeus
ENSAPLG00000013914	PARN	91	72.837	ENSELUG00000013139	parn	74	73.638	Esox_lucius
ENSAPLG00000013914	PARN	99	83.254	ENSFCAG00000044961	PARN	99	83.254	Felis_catus
ENSAPLG00000013914	PARN	99	94.453	ENSFALG00000003911	PARN	98	94.453	Ficedula_albicollis
ENSAPLG00000013914	PARN	99	81.487	ENSFDAG00000009234	PARN	99	81.487	Fukomys_damarensis
ENSAPLG00000013914	PARN	92	66.951	ENSFHEG00000013738	parn	83	83.019	Fundulus_heteroclitus
ENSAPLG00000013914	PARN	83	77.083	ENSGMOG00000003231	parn	96	77.083	Gadus_morhua
ENSAPLG00000013914	PARN	99	93.819	ENSGALG00000003091	PARN	99	93.819	Gallus_gallus
ENSAPLG00000013914	PARN	89	73.090	ENSGAFG00000011061	parn	83	72.014	Gambusia_affinis
ENSAPLG00000013914	PARN	83	77.170	ENSGACG00000019501	parn	99	67.500	Gasterosteus_aculeatus
ENSAPLG00000013914	PARN	55	83.003	ENSGAGG00000023281	PARN	83	86.154	Gopherus_agassizii
ENSAPLG00000013914	PARN	97	85.877	ENSGGOG00000025224	PARN	99	87.037	Gorilla_gorilla
ENSAPLG00000013914	PARN	91	74.483	ENSHBUG00000017906	parn	93	73.882	Haplochromis_burtoni
ENSAPLG00000013914	PARN	99	82.120	ENSHGLG00000010886	PARN	99	82.120	Heterocephalus_glaber_female
ENSAPLG00000013914	PARN	99	82.120	ENSHGLG00100014659	PARN	99	82.120	Heterocephalus_glaber_male
ENSAPLG00000013914	PARN	88	69.825	ENSHCOG00000008683	parn	98	69.474	Hippocampus_comes
ENSAPLG00000013914	PARN	90	63.112	ENSIPUG00000012401	parn	84	63.112	Ictalurus_punctatus
ENSAPLG00000013914	PARN	99	82.437	ENSSTOG00000007519	PARN	99	82.437	Ictidomys_tridecemlineatus
ENSAPLG00000013914	PARN	99	80.507	ENSJJAG00000023049	Parn	99	80.507	Jaculus_jaculus
ENSAPLG00000013914	PARN	90	74.138	ENSKMAG00000009462	parn	83	73.621	Kryptolebias_marmoratus
ENSAPLG00000013914	PARN	90	72.884	ENSLBEG00000009167	parn	88	72.539	Labrus_bergylta
ENSAPLG00000013914	PARN	79	78.812	ENSLACG00000004207	PARN	99	76.359	Latimeria_chalumnae
ENSAPLG00000013914	PARN	93	76.949	ENSLOCG00000000715	parn	85	76.949	Lepisosteus_oculatus
ENSAPLG00000013914	PARN	99	83.570	ENSLAFG00000015036	PARN	99	83.570	Loxodonta_africana
ENSAPLG00000013914	PARN	99	80.472	ENSMFAG00000044852	PARN	99	87.037	Macaca_fascicularis
ENSAPLG00000013914	PARN	99	85.016	ENSMMUG00000018849	PARN	99	87.037	Macaca_mulatta
ENSAPLG00000013914	PARN	99	85.016	ENSMNEG00000045108	PARN	99	87.037	Macaca_nemestrina
ENSAPLG00000013914	PARN	99	84.858	ENSMLEG00000031743	PARN	99	87.037	Mandrillus_leucophaeus
ENSAPLG00000013914	PARN	92	71.765	ENSMAMG00000006939	parn	83	72.461	Mastacembelus_armatus
ENSAPLG00000013914	PARN	91	74.483	ENSMZEG00005013590	parn	94	74.113	Maylandia_zebra
ENSAPLG00000013914	PARN	96	93.464	ENSMGAG00000001004	PARN	96	93.464	Meleagris_gallopavo
ENSAPLG00000013914	PARN	99	73.988	ENSMAUG00000008025	Parn	99	73.988	Mesocricetus_auratus
ENSAPLG00000013914	PARN	51	34.752	ENSMAUG00000012298	Pnldc1	68	34.247	Mesocricetus_auratus
ENSAPLG00000013914	PARN	99	84.202	ENSMICG00000016053	PARN	99	84.202	Microcebus_murinus
ENSAPLG00000013914	PARN	77	85.890	ENSMOCG00000022211	Parn	99	85.890	Microtus_ochrogaster
ENSAPLG00000013914	PARN	86	72.482	ENSMMOG00000011333	parn	86	75.425	Mola_mola
ENSAPLG00000013914	PARN	77	91.446	ENSMODG00000004915	PARN	98	91.446	Monodelphis_domestica
ENSAPLG00000013914	PARN	86	75.451	ENSMALG00000019426	parn	93	74.910	Monopterus_albus
ENSAPLG00000013914	PARN	99	79.937	MGP_CAROLIEiJ_G0020466	Parn	99	79.937	Mus_caroli
ENSAPLG00000013914	PARN	99	79.463	ENSMUSG00000022685	Parn	99	79.463	Mus_musculus
ENSAPLG00000013914	PARN	99	79.779	MGP_PahariEiJ_G0016172	Parn	99	79.779	Mus_pahari
ENSAPLG00000013914	PARN	99	79.463	MGP_SPRETEiJ_G0021361	Parn	99	79.463	Mus_spretus
ENSAPLG00000013914	PARN	99	83.096	ENSMPUG00000014464	PARN	99	83.096	Mustela_putorius_furo
ENSAPLG00000013914	PARN	77	88.139	ENSMLUG00000005414	PARN	99	88.139	Myotis_lucifugus
ENSAPLG00000013914	PARN	87	73.882	ENSNBRG00000006805	parn	94	73.741	Neolamprologus_brichardi
ENSAPLG00000013914	PARN	99	84.543	ENSNLEG00000010241	PARN	99	87.037	Nomascus_leucogenys
ENSAPLG00000013914	PARN	99	59.905	ENSMEUG00000008178	-	100	59.905	Notamacropus_eugenii
ENSAPLG00000013914	PARN	99	78.922	ENSOPRG00000012187	PARN	100	78.922	Ochotona_princeps
ENSAPLG00000013914	PARN	99	74.961	ENSODEG00000001617	PARN	99	74.961	Octodon_degus
ENSAPLG00000013914	PARN	91	74.655	ENSONIG00000000151	parn	82	78.049	Oreochromis_niloticus
ENSAPLG00000013914	PARN	59	85.106	ENSOANG00000020155	-	97	85.106	Ornithorhynchus_anatinus
ENSAPLG00000013914	PARN	99	83.886	ENSOCUG00000000322	PARN	99	83.886	Oryctolagus_cuniculus
ENSAPLG00000013914	PARN	99	64.159	ENSORLG00020010313	parn	99	64.671	Oryzias_latipes_hni
ENSAPLG00000013914	PARN	99	63.717	ENSORLG00015000300	parn	99	64.521	Oryzias_latipes_hsok
ENSAPLG00000013914	PARN	91	72.964	ENSOMEG00000019555	parn	95	66.667	Oryzias_melastigma
ENSAPLG00000013914	PARN	77	86.939	ENSOGAG00000014626	PARN	99	86.939	Otolemur_garnettii
ENSAPLG00000013914	PARN	77	90.184	ENSOARG00000007574	PARN	99	90.184	Ovis_aries
ENSAPLG00000013914	PARN	99	84.858	ENSPPAG00000031438	PARN	99	87.037	Pan_paniscus
ENSAPLG00000013914	PARN	99	83.096	ENSPPRG00000018583	PARN	99	83.096	Panthera_pardus
ENSAPLG00000013914	PARN	99	83.096	ENSPTIG00000012135	PARN	99	83.096	Panthera_tigris_altaica
ENSAPLG00000013914	PARN	99	84.543	ENSPTRG00000007792	PARN	99	87.037	Pan_troglodytes
ENSAPLG00000013914	PARN	99	82.019	ENSPANG00000020099	PARN	99	87.037	Papio_anubis
ENSAPLG00000013914	PARN	91	75.868	ENSPKIG00000022807	parn	91	71.039	Paramormyrops_kingsleyae
ENSAPLG00000013914	PARN	97	88.331	ENSPSIG00000014804	PARN	100	87.695	Pelodiscus_sinensis
ENSAPLG00000013914	PARN	89	71.201	ENSPMGG00000014431	parn	79	71.555	Periophthalmus_magnuspinnatus
ENSAPLG00000013914	PARN	99	77.251	ENSPEMG00000018439	Parn	99	76.619	Peromyscus_maniculatus_bairdii
ENSAPLG00000013914	PARN	81	66.602	ENSPMAG00000003956	parn	98	66.602	Petromyzon_marinus
ENSAPLG00000013914	PARN	66	83.254	ENSPCIG00000001259	PARN	91	83.014	Phascolarctos_cinereus
ENSAPLG00000013914	PARN	89	72.997	ENSPFOG00000012823	parn	83	72.089	Poecilia_formosa
ENSAPLG00000013914	PARN	89	73.171	ENSPLAG00000006395	parn	83	72.260	Poecilia_latipinna
ENSAPLG00000013914	PARN	89	73.171	ENSPMEG00000007711	parn	82	72.712	Poecilia_mexicana
ENSAPLG00000013914	PARN	89	72.997	ENSPREG00000000147	parn	82	72.366	Poecilia_reticulata
ENSAPLG00000013914	PARN	99	84.434	ENSPPYG00000007123	PARN	99	84.434	Pongo_abelii
ENSAPLG00000013914	PARN	95	74.545	ENSPCAG00000001741	PARN	100	74.545	Procavia_capensis
ENSAPLG00000013914	PARN	99	81.517	ENSPCOG00000019292	PARN	99	81.517	Propithecus_coquereli
ENSAPLG00000013914	PARN	99	80.349	ENSPVAG00000002547	PARN	100	80.349	Pteropus_vampyrus
ENSAPLG00000013914	PARN	91	74.483	ENSPNYG00000006835	parn	94	70.796	Pundamilia_nyererei
ENSAPLG00000013914	PARN	84	72.233	ENSPNAG00000018905	parn	85	71.857	Pygocentrus_nattereri
ENSAPLG00000013914	PARN	99	78.495	ENSRNOG00000002912	Parn	98	84.848	Rattus_norvegicus
ENSAPLG00000013914	PARN	52	80.781	ENSRBIG00000018726	PARN	100	80.781	Rhinopithecus_bieti
ENSAPLG00000013914	PARN	52	80.781	ENSRROG00000011162	-	100	80.781	Rhinopithecus_roxellana
ENSAPLG00000013914	PARN	99	82.492	ENSSBOG00000034726	PARN	99	87.037	Saimiri_boliviensis_boliviensis
ENSAPLG00000013914	PARN	66	90.431	ENSSHAG00000008493	PARN	94	90.431	Sarcophilus_harrisii
ENSAPLG00000013914	PARN	95	74.215	ENSSFOG00015014165	parn	93	74.653	Scleropages_formosus
ENSAPLG00000013914	PARN	90	71.306	ENSSMAG00000000685	parn	90	68.683	Scophthalmus_maximus
ENSAPLG00000013914	PARN	90	73.150	ENSSDUG00000014555	parn	82	72.633	Seriola_dumerili
ENSAPLG00000013914	PARN	91	74.048	ENSSARG00000014339	PARN	100	74.048	Sorex_araneus
ENSAPLG00000013914	PARN	99	89.557	ENSSPUG00000007719	PARN	99	89.557	Sphenodon_punctatus
ENSAPLG00000013914	PARN	99	65.877	ENSSPAG00000007095	parn	89	71.892	Stegastes_partitus
ENSAPLG00000013914	PARN	99	82.780	ENSSSCG00000007878	PARN	89	82.780	Sus_scrofa
ENSAPLG00000013914	PARN	100	93.887	ENSTGUG00000004971	PARN	100	93.887	Taeniopygia_guttata
ENSAPLG00000013914	PARN	55	30.833	ENSTGUG00000011418	PNLDC1	68	30.278	Taeniopygia_guttata
ENSAPLG00000013914	PARN	99	68.906	ENSTNIG00000008252	parn	99	69.036	Tetraodon_nigroviridis
ENSAPLG00000013914	PARN	91	70.639	ENSTBEG00000010407	PARN	100	70.639	Tupaia_belangeri
ENSAPLG00000013914	PARN	99	78.922	ENSTTRG00000002843	PARN	100	78.922	Tursiops_truncatus
ENSAPLG00000013914	PARN	73	75.751	ENSUAMG00000008283	PARN	95	75.751	Ursus_americanus
ENSAPLG00000013914	PARN	99	83.412	ENSUMAG00000004527	PARN	99	83.412	Ursus_maritimus
ENSAPLG00000013914	PARN	94	82.609	ENSVPAG00000008968	PARN	97	83.165	Vicugna_pacos
ENSAPLG00000013914	PARN	99	83.096	ENSVVUG00000019509	PARN	99	83.096	Vulpes_vulpes
ENSAPLG00000013914	PARN	99	76.825	ENSXETG00000010994	parn	99	83.462	Xenopus_tropicalis
ENSAPLG00000013914	PARN	89	68.870	ENSXCOG00000015990	parn	95	68.376	Xiphophorus_couchianus
ENSAPLG00000013914	PARN	91	72.260	ENSXMAG00000014783	parn	83	71.747	Xiphophorus_maculatus