EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000013974 (Gene tree)
Gene ID: 101795557
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 6885 bases
Position: chrKB746632.1:475050-481934
Accession: 101795557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000013789	RRM_1	PF00076.22	3.6e-39	1	3
ENSAPLP00000013789	RRM_1	PF00076.22	3.6e-39	2	3
ENSAPLP00000013789	RRM_1	PF00076.22	3.6e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000014554	RBM47-201	1740	XM_005030848	ENSAPLP00000013789	579 (aa)	-	U3J2R2

Gene Model

Click here to download ENSAPLG00000013974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000013974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000013974	RBM47	53	53.376	ENSAPLG00000009918	SYNCRIP	80	43.736
ENSAPLG00000013974	RBM47	55	54.180	ENSAPLG00000003755	HNRNPR	64	48.049
ENSAPLG00000013974	RBM47	74	58.889	ENSAPLG00000002964	A1CF	75	58.499
ENSAPLG00000013974	RBM47	53	71.104	ENSAPLG00000005116	RBM46	66	71.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000013974	RBM47	100	87.584	ENSG00000163694	RBM47	100	93.088	Homo_sapiens
ENSAPLG00000013974	RBM47	100	77.167	ENSAPOG00000011062	rbm47	100	81.980	Acanthochromis_polyacanthus
ENSAPLG00000013974	RBM47	100	87.752	ENSAMEG00000009672	RBM47	100	88.255	Ailuropoda_melanoleuca
ENSAPLG00000013974	RBM47	100	76.333	ENSACIG00000011531	rbm47	100	76.000	Amphilophus_citrinellus
ENSAPLG00000013974	RBM47	100	77.629	ENSAOCG00000022245	rbm47	100	78.297	Amphiprion_ocellaris
ENSAPLG00000013974	RBM47	100	77.295	ENSAPEG00000018304	rbm47	100	77.963	Amphiprion_percula
ENSAPLG00000013974	RBM47	100	75.817	ENSATEG00000018400	rbm47	100	75.654	Anabas_testudineus
ENSAPLG00000013974	RBM47	100	85.857	ENSACAG00000011833	RBM47	100	86.855	Anolis_carolinensis
ENSAPLG00000013974	RBM47	100	88.087	ENSANAG00000029440	RBM47	100	88.423	Aotus_nancymaae
ENSAPLG00000013974	RBM47	100	75.654	ENSACLG00000016902	rbm47	100	82.663	Astatotilapia_calliptera
ENSAPLG00000013974	RBM47	96	77.123	ENSAMXG00000021794	rbm47	100	75.082	Astyanax_mexicanus
ENSAPLG00000013974	RBM47	100	88.364	ENSBTAG00000002356	RBM47	100	88.533	Bos_taurus
ENSAPLG00000013974	RBM47	100	87.858	ENSCJAG00000019385	RBM47	100	88.107	Callithrix_jacchus
ENSAPLG00000013974	RBM47	96	88.070	ENSCAFG00000015898	RBM47	100	86.700	Canis_familiaris
ENSAPLG00000013974	RBM47	85	91.057	ENSCAFG00020010558	RBM47	94	89.211	Canis_lupus_dingo
ENSAPLG00000013974	RBM47	100	88.364	ENSCHIG00000026214	RBM47	100	88.533	Capra_hircus
ENSAPLG00000013974	RBM47	86	87.611	ENSTSYG00000033612	RBM47	93	87.611	Carlito_syrichta
ENSAPLG00000013974	RBM47	100	80.640	ENSCAPG00000008426	RBM47	100	80.808	Cavia_aperea
ENSAPLG00000013974	RBM47	100	86.869	ENSCPOG00000014100	RBM47	100	87.037	Cavia_porcellus
ENSAPLG00000013974	RBM47	100	88.027	ENSCCAG00000030129	-	100	87.270	Cebus_capucinus
ENSAPLG00000013974	RBM47	99	63.419	ENSCCAG00000024397	-	99	63.103	Cebus_capucinus
ENSAPLG00000013974	RBM47	100	87.584	ENSCATG00000042064	RBM47	100	88.591	Cercocebus_atys
ENSAPLG00000013974	RBM47	100	86.869	ENSCLAG00000001684	RBM47	100	89.873	Chinchilla_lanigera
ENSAPLG00000013974	RBM47	100	87.584	ENSCSAG00000017060	RBM47	100	88.591	Chlorocebus_sabaeus
ENSAPLG00000013974	RBM47	88	85.011	ENSCHOG00000011731	RBM47	88	84.340	Choloepus_hoffmanni
ENSAPLG00000013974	RBM47	100	90.970	ENSCPBG00000013831	RBM47	100	91.806	Chrysemys_picta_bellii
ENSAPLG00000013974	RBM47	100	88.087	ENSCANG00000019997	RBM47	100	88.423	Colobus_angolensis_palliatus
ENSAPLG00000013974	RBM47	100	63.898	ENSCGRG00001020102	-	100	68.475	Cricetulus_griseus_chok1gshd
ENSAPLG00000013974	RBM47	100	86.532	ENSCGRG00001000623	-	100	86.364	Cricetulus_griseus_chok1gshd
ENSAPLG00000013974	RBM47	100	85.690	ENSCGRG00000007762	-	100	87.975	Cricetulus_griseus_crigri
ENSAPLG00000013974	RBM47	100	63.729	ENSCGRG00000014760	-	100	68.305	Cricetulus_griseus_crigri
ENSAPLG00000013974	RBM47	100	73.667	ENSCSEG00000004545	rbm47	100	75.083	Cynoglossus_semilaevis
ENSAPLG00000013974	RBM47	100	75.418	ENSCVAG00000020144	rbm47	100	82.487	Cyprinodon_variegatus
ENSAPLG00000013974	RBM47	96	78.646	ENSDARG00000061985	rbm47	100	75.822	Danio_rerio
ENSAPLG00000013974	RBM47	100	86.993	ENSDNOG00000046854	RBM47	100	87.669	Dasypus_novemcinctus
ENSAPLG00000013974	RBM47	100	86.957	ENSDORG00000010144	Rbm47	100	87.458	Dipodomys_ordii
ENSAPLG00000013974	RBM47	97	87.780	ENSETEG00000009194	RBM47	100	87.270	Echinops_telfairi
ENSAPLG00000013974	RBM47	99	56.766	ENSEBUG00000011912	rbm47	99	58.086	Eptatretus_burgeri
ENSAPLG00000013974	RBM47	100	87.858	ENSEASG00005008443	RBM47	100	88.196	Equus_asinus_asinus
ENSAPLG00000013974	RBM47	100	87.858	ENSECAG00000004400	RBM47	100	88.196	Equus_caballus
ENSAPLG00000013974	RBM47	74	92.208	ENSEEUG00000001194	RBM47	75	92.208	Erinaceus_europaeus
ENSAPLG00000013974	RBM47	100	74.434	ENSELUG00000006148	rbm47	100	82.828	Esox_lucius
ENSAPLG00000013974	RBM47	100	88.027	ENSFCAG00000012399	RBM47	100	88.027	Felis_catus
ENSAPLG00000013974	RBM47	100	95.134	ENSFALG00000002861	RBM47	100	95.134	Ficedula_albicollis
ENSAPLG00000013974	RBM47	100	85.185	ENSFDAG00000016326	RBM47	100	85.185	Fukomys_damarensis
ENSAPLG00000013974	RBM47	100	76.087	ENSFHEG00000007938	rbm47	100	76.589	Fundulus_heteroclitus
ENSAPLG00000013974	RBM47	100	73.539	ENSGMOG00000014802	rbm47	100	73.539	Gadus_morhua
ENSAPLG00000013974	RBM47	65	98.404	ENSGALG00000014267	RBM47	99	98.404	Gallus_gallus
ENSAPLG00000013974	RBM47	65	84.574	ENSGAFG00000020571	rbm47	98	84.574	Gambusia_affinis
ENSAPLG00000013974	RBM47	100	74.230	ENSGACG00000016223	rbm47	100	74.392	Gasterosteus_aculeatus
ENSAPLG00000013974	RBM47	100	91.304	ENSGAGG00000020051	RBM47	100	92.140	Gopherus_agassizii
ENSAPLG00000013974	RBM47	100	87.584	ENSGGOG00000001367	RBM47	100	88.591	Gorilla_gorilla
ENSAPLG00000013974	RBM47	100	75.407	ENSHBUG00000003520	rbm47	100	82.663	Haplochromis_burtoni
ENSAPLG00000013974	RBM47	84	71.011	ENSHGLG00000016914	RBM47	100	88.608	Heterocephalus_glaber_female
ENSAPLG00000013974	RBM47	100	80.829	ENSHGLG00100003071	-	100	80.829	Heterocephalus_glaber_male
ENSAPLG00000013974	RBM47	100	85.980	ENSHGLG00100014028	-	100	88.608	Heterocephalus_glaber_male
ENSAPLG00000013974	RBM47	99	75.920	ENSHCOG00000002074	rbm47	99	76.254	Hippocampus_comes
ENSAPLG00000013974	RBM47	100	76.589	ENSIPUG00000004743	rbm47	100	75.879	Ictalurus_punctatus
ENSAPLG00000013974	RBM47	100	87.270	ENSSTOG00000004727	RBM47	100	87.975	Ictidomys_tridecemlineatus
ENSAPLG00000013974	RBM47	100	86.913	ENSJJAG00000013823	Rbm47	100	87.248	Jaculus_jaculus
ENSAPLG00000013974	RBM47	100	77.500	ENSKMAG00000000084	rbm47	100	80.964	Kryptolebias_marmoratus
ENSAPLG00000013974	RBM47	100	75.667	ENSLBEG00000008436	rbm47	100	75.167	Labrus_bergylta
ENSAPLG00000013974	RBM47	100	83.585	ENSLACG00000007196	RBM47	100	84.422	Latimeria_chalumnae
ENSAPLG00000013974	RBM47	100	81.636	ENSLOCG00000012966	rbm47	95	80.769	Lepisosteus_oculatus
ENSAPLG00000013974	RBM47	100	87.248	ENSLAFG00000011998	RBM47	100	86.745	Loxodonta_africana
ENSAPLG00000013974	RBM47	100	87.584	ENSMFAG00000037967	RBM47	100	88.591	Macaca_fascicularis
ENSAPLG00000013974	RBM47	100	87.584	ENSMMUG00000012036	RBM47	100	92.228	Macaca_mulatta
ENSAPLG00000013974	RBM47	100	87.416	ENSMNEG00000040774	RBM47	100	88.423	Macaca_nemestrina
ENSAPLG00000013974	RBM47	100	93.968	ENSMLEG00000041432	RBM47	100	93.968	Mandrillus_leucophaeus
ENSAPLG00000013974	RBM47	100	75.286	ENSMAMG00000019143	rbm47	100	75.450	Mastacembelus_armatus
ENSAPLG00000013974	RBM47	100	75.654	ENSMZEG00005023659	rbm47	99	83.632	Maylandia_zebra
ENSAPLG00000013974	RBM47	100	94.825	ENSMGAG00000012226	RBM47	100	94.825	Meleagris_gallopavo
ENSAPLG00000013974	RBM47	100	86.532	ENSMAUG00000006493	Rbm47	100	87.975	Mesocricetus_auratus
ENSAPLG00000013974	RBM47	100	81.450	ENSMICG00000026417	RBM47	100	85.979	Microcebus_murinus
ENSAPLG00000013974	RBM47	100	86.678	ENSMOCG00000021170	Rbm47	100	87.975	Microtus_ochrogaster
ENSAPLG00000013974	RBM47	100	75.450	ENSMMOG00000007260	rbm47	100	75.286	Mola_mola
ENSAPLG00000013974	RBM47	100	89.412	ENSMODG00000007003	RBM47	100	88.403	Monodelphis_domestica
ENSAPLG00000013974	RBM47	54	81.962	ENSMODG00000015426	-	97	83.280	Monodelphis_domestica
ENSAPLG00000013974	RBM47	100	80.438	ENSMODG00000020561	-	100	79.933	Monodelphis_domestica
ENSAPLG00000013974	RBM47	100	74.833	ENSMALG00000005167	rbm47	100	75.833	Monopterus_albus
ENSAPLG00000013974	RBM47	100	86.149	MGP_CAROLIEiJ_G0027258	Rbm47	100	87.342	Mus_caroli
ENSAPLG00000013974	RBM47	100	86.486	ENSMUSG00000070780	Rbm47	100	87.342	Mus_musculus
ENSAPLG00000013974	RBM47	100	86.486	MGP_PahariEiJ_G0017040	Rbm47	100	87.975	Mus_pahari
ENSAPLG00000013974	RBM47	100	86.464	MGP_SPRETEiJ_G0028253	Rbm47	100	87.342	Mus_spretus
ENSAPLG00000013974	RBM47	100	88.196	ENSMPUG00000006177	RBM47	94	88.533	Mustela_putorius_furo
ENSAPLG00000013974	RBM47	100	86.678	ENSMLUG00000000889	RBM47	100	87.184	Myotis_lucifugus
ENSAPLG00000013974	RBM47	100	86.869	ENSNGAG00000003325	Rbm47	100	87.205	Nannospalax_galili
ENSAPLG00000013974	RBM47	100	75.856	ENSNBRG00000015092	rbm47	100	76.623	Neolamprologus_brichardi
ENSAPLG00000013974	RBM47	100	87.248	ENSNLEG00000017151	RBM47	100	88.255	Nomascus_leucogenys
ENSAPLG00000013974	RBM47	74	87.731	ENSMEUG00000009516	-	100	86.574	Notamacropus_eugenii
ENSAPLG00000013974	RBM47	75	93.388	ENSOPRG00000016507	-	75	93.388	Ochotona_princeps
ENSAPLG00000013974	RBM47	100	86.869	ENSODEG00000004873	RBM47	100	87.205	Octodon_degus
ENSAPLG00000013974	RBM47	100	75.204	ENSONIG00000009061	rbm47	100	75.204	Oreochromis_niloticus
ENSAPLG00000013974	RBM47	100	84.692	ENSOANG00000008978	RBM47	100	85.358	Ornithorhynchus_anatinus
ENSAPLG00000013974	RBM47	100	87.542	ENSOCUG00000012034	RBM47	100	87.710	Oryctolagus_cuniculus
ENSAPLG00000013974	RBM47	100	76.087	ENSORLG00000005847	rbm47	100	81.586	Oryzias_latipes
ENSAPLG00000013974	RBM47	100	76.087	ENSORLG00020005154	rbm47	100	81.586	Oryzias_latipes_hni
ENSAPLG00000013974	RBM47	100	76.421	ENSORLG00015000066	rbm47	100	81.841	Oryzias_latipes_hsok
ENSAPLG00000013974	RBM47	100	77.258	ENSOMEG00000010730	rbm47	100	77.090	Oryzias_melastigma
ENSAPLG00000013974	RBM47	100	80.034	ENSOGAG00000025193	-	100	80.372	Otolemur_garnettii
ENSAPLG00000013974	RBM47	100	88.364	ENSOGAG00000029367	-	100	88.702	Otolemur_garnettii
ENSAPLG00000013974	RBM47	100	81.324	ENSOARG00000012711	RBM47	100	81.494	Ovis_aries
ENSAPLG00000013974	RBM47	100	87.416	ENSPPAG00000029763	RBM47	100	88.423	Pan_paniscus
ENSAPLG00000013974	RBM47	100	84.992	ENSPPRG00000012873	RBM47	99	92.287	Panthera_pardus
ENSAPLG00000013974	RBM47	85	85.828	ENSPTIG00000017046	RBM47	100	86.028	Panthera_tigris_altaica
ENSAPLG00000013974	RBM47	100	87.584	ENSPTRG00000016006	RBM47	100	88.591	Pan_troglodytes
ENSAPLG00000013974	RBM47	100	87.584	ENSPANG00000005980	RBM47	100	88.591	Papio_anubis
ENSAPLG00000013974	RBM47	96	76.307	ENSPKIG00000005037	rbm47	100	73.632	Paramormyrops_kingsleyae
ENSAPLG00000013974	RBM47	96	75.260	ENSPKIG00000013431	RBM47	100	72.742	Paramormyrops_kingsleyae
ENSAPLG00000013974	RBM47	92	94.340	ENSPSIG00000017516	RBM47	97	94.340	Pelodiscus_sinensis
ENSAPLG00000013974	RBM47	100	74.247	ENSPMGG00000018540	rbm47	100	75.000	Periophthalmus_magnuspinnatus
ENSAPLG00000013974	RBM47	100	86.364	ENSPEMG00000011088	Rbm47	100	86.700	Peromyscus_maniculatus_bairdii
ENSAPLG00000013974	RBM47	96	78.584	ENSPFOG00000007997	rbm47	100	75.812	Poecilia_formosa
ENSAPLG00000013974	RBM47	96	78.374	ENSPLAG00000002072	rbm47	100	84.392	Poecilia_latipinna
ENSAPLG00000013974	RBM47	100	77.500	ENSPMEG00000017492	rbm47	100	77.833	Poecilia_mexicana
ENSAPLG00000013974	RBM47	96	78.720	ENSPREG00000008456	rbm47	100	84.392	Poecilia_reticulata
ENSAPLG00000013974	RBM47	98	77.534	ENSPPYG00000014688	RBM47	100	78.378	Pongo_abelii
ENSAPLG00000013974	RBM47	81	91.542	ENSPCAG00000011879	RBM47	81	92.040	Procavia_capensis
ENSAPLG00000013974	RBM47	100	84.772	ENSPCOG00000023451	RBM47	100	85.279	Propithecus_coquereli
ENSAPLG00000013974	RBM47	100	87.395	ENSPVAG00000003812	RBM47	100	88.235	Pteropus_vampyrus
ENSAPLG00000013974	RBM47	100	75.285	ENSPNYG00000022868	rbm47	100	76.052	Pundamilia_nyererei
ENSAPLG00000013974	RBM47	100	74.304	ENSPNAG00000007940	rbm47	100	75.614	Pygocentrus_nattereri
ENSAPLG00000013974	RBM47	100	86.655	ENSRNOG00000002408	Rbm47	100	86.824	Rattus_norvegicus
ENSAPLG00000013974	RBM47	100	88.087	ENSRBIG00000039601	RBM47	100	88.196	Rhinopithecus_bieti
ENSAPLG00000013974	RBM47	100	88.087	ENSRROG00000044696	RBM47	100	88.196	Rhinopithecus_roxellana
ENSAPLG00000013974	RBM47	100	84.823	ENSSBOG00000028475	RBM47	100	90.535	Saimiri_boliviensis_boliviensis
ENSAPLG00000013974	RBM47	100	88.533	ENSSHAG00000017576	RBM47	100	88.215	Sarcophilus_harrisii
ENSAPLG00000013974	RBM47	100	76.311	ENSSFOG00015012445	rbm47	100	76.481	Scleropages_formosus
ENSAPLG00000013974	RBM47	98	75.125	ENSSFOG00015024101	RBM47	100	74.457	Scleropages_formosus
ENSAPLG00000013974	RBM47	100	73.366	ENSSMAG00000009744	rbm47	100	79.597	Scophthalmus_maximus
ENSAPLG00000013974	RBM47	100	77.090	ENSSDUG00000022684	rbm47	100	77.258	Seriola_dumerili
ENSAPLG00000013974	RBM47	100	77.592	ENSSLDG00000003109	rbm47	100	81.658	Seriola_lalandi_dorsalis
ENSAPLG00000013974	RBM47	84	91.518	ENSSARG00000001735	RBM47	84	91.741	Sorex_araneus
ENSAPLG00000013974	RBM47	100	89.112	ENSSPUG00000007515	RBM47	100	93.386	Sphenodon_punctatus
ENSAPLG00000013974	RBM47	100	77.833	ENSSPAG00000001257	rbm47	100	78.000	Stegastes_partitus
ENSAPLG00000013974	RBM47	100	88.702	ENSSSCG00000008796	RBM47	100	88.364	Sus_scrofa
ENSAPLG00000013974	RBM47	100	95.294	ENSTGUG00000008705	RBM47	100	95.294	Taeniopygia_guttata
ENSAPLG00000013974	RBM47	100	74.916	ENSTRUG00000014050	rbm47	100	74.415	Takifugu_rubripes
ENSAPLG00000013974	RBM47	100	74.468	ENSTNIG00000006127	rbm47	100	74.141	Tetraodon_nigroviridis
ENSAPLG00000013974	RBM47	76	85.372	ENSTBEG00000001607	RBM47	76	86.170	Tupaia_belangeri
ENSAPLG00000013974	RBM47	100	88.325	ENSTTRG00000002839	RBM47	100	88.663	Tursiops_truncatus
ENSAPLG00000013974	RBM47	100	89.020	ENSUAMG00000021346	RBM47	100	89.189	Ursus_americanus
ENSAPLG00000013974	RBM47	55	89.041	ENSVPAG00000000641	-	57	89.041	Vicugna_pacos
ENSAPLG00000013974	RBM47	96	87.719	ENSVVUG00000014774	RBM47	100	86.195	Vulpes_vulpes
ENSAPLG00000013974	RBM47	100	84.966	ENSXETG00000012802	rbm47	100	84.966	Xenopus_tropicalis
ENSAPLG00000013974	RBM47	88	84.127	ENSXCOG00000000780	rbm47	100	84.127	Xiphophorus_couchianus
ENSAPLG00000013974	RBM47	100	76.756	ENSXMAG00000009874	rbm47	100	81.472	Xiphophorus_maculatus