EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000014418 (Gene tree)
Gene ID: -
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 20301 bases
Position: chrKB744088.1:1058178-1078478
Accession: 101796258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000014272	POP1	PF06978.11	1.4e-39	1	2
ENSAPLP00000014272	POP1	PF06978.11	1.4e-39	2	2
ENSAPLP00000014272	POPLD	PF08170.12	1.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000015047	POP1-201	2781	XM_005027045	ENSAPLP00000014272	926 (aa)	-	U3J445

Gene Model

Click here to download ENSAPLG00000014418's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03008	Ribosome biogenesis in eukaryotes	KEGG
apla03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000014418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000014418	POP1	100	63.617	ENSG00000104356	POP1	92	63.617	Homo_sapiens
ENSAPLG00000014418	POP1	99	49.277	ENSAPOG00000008198	pop1	94	49.174	Acanthochromis_polyacanthus
ENSAPLG00000014418	POP1	99	62.354	ENSAMEG00000000556	POP1	92	62.394	Ailuropoda_melanoleuca
ENSAPLG00000014418	POP1	97	49.679	ENSACIG00000004169	POP1	93	49.679	Amphilophus_citrinellus
ENSAPLG00000014418	POP1	99	48.301	ENSAOCG00000010991	pop1	94	48.554	Amphiprion_ocellaris
ENSAPLG00000014418	POP1	99	46.488	ENSAPEG00000007607	pop1	96	46.839	Amphiprion_percula
ENSAPLG00000014418	POP1	99	48.482	ENSATEG00000024814	POP1	95	48.785	Anabas_testudineus
ENSAPLG00000014418	POP1	98	64.687	ENSACAG00000016083	POP1	91	64.579	Anolis_carolinensis
ENSAPLG00000014418	POP1	87	75.194	ENSANAG00000026360	POP1	92	75.194	Aotus_nancymaae
ENSAPLG00000014418	POP1	99	49.429	ENSACLG00000010951	pop1	93	49.325	Astatotilapia_calliptera
ENSAPLG00000014418	POP1	99	47.470	ENSAMXG00000014483	POP1	94	47.470	Astyanax_mexicanus
ENSAPLG00000014418	POP1	100	60.568	ENSBTAG00000012596	POP1	92	60.934	Bos_taurus
ENSAPLG00000014418	POP1	52	32.197	WBGene00015486	C05D11.9	59	32.197	Caenorhabditis_elegans
ENSAPLG00000014418	POP1	100	62.526	ENSCJAG00000015567	POP1	93	62.526	Callithrix_jacchus
ENSAPLG00000014418	POP1	100	62.513	ENSCAFG00000000469	POP1	92	62.513	Canis_familiaris
ENSAPLG00000014418	POP1	100	63.136	ENSCAFG00020026765	POP1	92	63.136	Canis_lupus_dingo
ENSAPLG00000014418	POP1	100	61.012	ENSCHIG00000017066	POP1	92	61.012	Capra_hircus
ENSAPLG00000014418	POP1	100	61.433	ENSTSYG00000003097	POP1	92	61.433	Carlito_syrichta
ENSAPLG00000014418	POP1	99	59.936	ENSCAPG00000007251	POP1	92	59.830	Cavia_aperea
ENSAPLG00000014418	POP1	99	61.859	ENSCPOG00000002901	POP1	92	61.752	Cavia_porcellus
ENSAPLG00000014418	POP1	100	62.276	ENSCCAG00000018939	POP1	94	62.276	Cebus_capucinus
ENSAPLG00000014418	POP1	100	62.735	ENSCATG00000040916	POP1	92	62.630	Cercocebus_atys
ENSAPLG00000014418	POP1	99	60.957	ENSCLAG00000007208	POP1	89	61.064	Chinchilla_lanigera
ENSAPLG00000014418	POP1	98	63.305	ENSCSAG00000012340	POP1	99	63.519	Chlorocebus_sabaeus
ENSAPLG00000014418	POP1	99	58.581	ENSCHOG00000011432	POP1	96	58.898	Choloepus_hoffmanni
ENSAPLG00000014418	POP1	99	74.542	ENSCPBG00000006373	POP1	92	74.786	Chrysemys_picta_bellii
ENSAPLG00000014418	POP1	74	38.866	ENSCING00000008323	-	75	38.866	Ciona_intestinalis
ENSAPLG00000014418	POP1	100	63.484	ENSCANG00000001647	POP1	92	63.379	Colobus_angolensis_palliatus
ENSAPLG00000014418	POP1	99	60.042	ENSCGRG00001017308	Pop1	92	59.788	Cricetulus_griseus_chok1gshd
ENSAPLG00000014418	POP1	99	56.448	ENSCGRG00000010824	Pop1	94	56.190	Cricetulus_griseus_crigri
ENSAPLG00000014418	POP1	99	47.352	ENSCSEG00000008737	POP1	93	47.664	Cynoglossus_semilaevis
ENSAPLG00000014418	POP1	99	49.266	ENSCVAG00000022248	pop1	94	49.581	Cyprinodon_variegatus
ENSAPLG00000014418	POP1	100	58.993	ENSDNOG00000019974	POP1	92	58.993	Dasypus_novemcinctus
ENSAPLG00000014418	POP1	99	53.191	ENSDORG00000015384	Pop1	91	53.879	Dipodomys_ordii
ENSAPLG00000014418	POP1	66	34.488	FBgn0026702	l(1)G0045	70	34.161	Drosophila_melanogaster
ENSAPLG00000014418	POP1	87	58.282	ENSETEG00000007839	POP1	80	58.282	Echinops_telfairi
ENSAPLG00000014418	POP1	52	37.426	ENSEBUG00000014694	-	99	37.228	Eptatretus_burgeri
ENSAPLG00000014418	POP1	99	62.234	ENSEASG00005003189	POP1	90	62.447	Equus_asinus_asinus
ENSAPLG00000014418	POP1	99	62.234	ENSECAG00000024236	POP1	92	62.234	Equus_caballus
ENSAPLG00000014418	POP1	65	52.009	ENSEEUG00000003050	-	63	52.009	Erinaceus_europaeus
ENSAPLG00000014418	POP1	99	49.211	ENSELUG00000003526	pop1	93	48.952	Esox_lucius
ENSAPLG00000014418	POP1	99	62.606	ENSFCAG00000002168	POP1	92	62.739	Felis_catus
ENSAPLG00000014418	POP1	99	84.490	ENSFALG00000005711	POP1	92	84.887	Ficedula_albicollis
ENSAPLG00000014418	POP1	99	60.381	ENSFDAG00000017068	POP1	92	60.593	Fukomys_damarensis
ENSAPLG00000014418	POP1	99	48.907	ENSFHEG00000019518	pop1	95	49.220	Fundulus_heteroclitus
ENSAPLG00000014418	POP1	99	45.670	ENSGMOG00000000659	POP1	97	45.361	Gadus_morhua
ENSAPLG00000014418	POP1	99	49.787	ENSGAFG00000019770	POP1	94	49.574	Gambusia_affinis
ENSAPLG00000014418	POP1	99	47.683	ENSGACG00000003499	pop1	92	47.580	Gasterosteus_aculeatus
ENSAPLG00000014418	POP1	99	74.730	ENSGAGG00000011737	POP1	90	74.786	Gopherus_agassizii
ENSAPLG00000014418	POP1	100	63.263	ENSGGOG00000003176	POP1	92	63.617	Gorilla_gorilla
ENSAPLG00000014418	POP1	99	48.960	ENSHBUG00000021583	pop1	93	49.016	Haplochromis_burtoni
ENSAPLG00000014418	POP1	99	60.983	ENSHGLG00000006029	POP1	92	61.117	Heterocephalus_glaber_female
ENSAPLG00000014418	POP1	99	60.983	ENSHGLG00100016879	POP1	92	61.117	Heterocephalus_glaber_male
ENSAPLG00000014418	POP1	99	47.341	ENSHCOG00000013888	pop1	97	47.341	Hippocampus_comes
ENSAPLG00000014418	POP1	99	46.414	ENSIPUG00000018336	pop1	95	45.563	Ictalurus_punctatus
ENSAPLG00000014418	POP1	99	62.513	ENSSTOG00000011455	POP1	89	62.513	Ictidomys_tridecemlineatus
ENSAPLG00000014418	POP1	100	59.388	ENSJJAG00000013325	Pop1	92	59.617	Jaculus_jaculus
ENSAPLG00000014418	POP1	99	49.102	ENSKMAG00000001346	POP1	94	49.102	Kryptolebias_marmoratus
ENSAPLG00000014418	POP1	97	48.096	ENSLBEG00000024457	POP1	95	47.919	Labrus_bergylta
ENSAPLG00000014418	POP1	99	56.608	ENSLACG00000012498	POP1	98	56.712	Latimeria_chalumnae
ENSAPLG00000014418	POP1	99	52.229	ENSLOCG00000009817	POP1	92	52.985	Lepisosteus_oculatus
ENSAPLG00000014418	POP1	100	63.588	ENSLAFG00000010770	POP1	92	63.694	Loxodonta_africana
ENSAPLG00000014418	POP1	100	62.854	ENSMFAG00000000347	POP1	92	63.064	Macaca_fascicularis
ENSAPLG00000014418	POP1	100	62.539	ENSMNEG00000036870	POP1	92	62.749	Macaca_nemestrina
ENSAPLG00000014418	POP1	100	62.854	ENSMLEG00000034986	POP1	92	63.064	Mandrillus_leucophaeus
ENSAPLG00000014418	POP1	99	49.325	ENSMAMG00000004040	pop1	93	49.533	Mastacembelus_armatus
ENSAPLG00000014418	POP1	99	49.325	ENSMZEG00005025448	pop1	93	49.221	Maylandia_zebra
ENSAPLG00000014418	POP1	99	83.438	ENSMGAG00000012167	POP1	93	83.593	Meleagris_gallopavo
ENSAPLG00000014418	POP1	99	61.352	ENSMAUG00000017537	Pop1	92	61.352	Mesocricetus_auratus
ENSAPLG00000014418	POP1	100	62.986	ENSMICG00000004361	POP1	92	62.986	Microcebus_murinus
ENSAPLG00000014418	POP1	99	59.451	ENSMOCG00000006356	Pop1	92	59.642	Microtus_ochrogaster
ENSAPLG00000014418	POP1	99	47.178	ENSMMOG00000018242	pop1	95	47.391	Mola_mola
ENSAPLG00000014418	POP1	100	62.262	ENSMODG00000006561	POP1	92	62.368	Monodelphis_domestica
ENSAPLG00000014418	POP1	99	49.165	ENSMALG00000012621	POP1	93	49.582	Monopterus_albus
ENSAPLG00000014418	POP1	99	59.029	MGP_CAROLIEiJ_G0019726	Pop1	92	59.405	Mus_caroli
ENSAPLG00000014418	POP1	99	59.345	ENSMUSG00000022325	Pop1	92	59.597	Mus_musculus
ENSAPLG00000014418	POP1	99	59.134	MGP_PahariEiJ_G0019735	Pop1	92	59.134	Mus_pahari
ENSAPLG00000014418	POP1	99	59.830	MGP_SPRETEiJ_G0020622	Pop1	92	59.936	Mus_spretus
ENSAPLG00000014418	POP1	99	62.646	ENSMPUG00000015250	POP1	92	62.751	Mustela_putorius_furo
ENSAPLG00000014418	POP1	100	58.737	ENSMLUG00000010204	POP1	92	58.737	Myotis_lucifugus
ENSAPLG00000014418	POP1	100	60.778	ENSNGAG00000001582	Pop1	92	60.906	Nannospalax_galili
ENSAPLG00000014418	POP1	97	48.332	ENSNBRG00000002356	pop1	94	48.085	Neolamprologus_brichardi
ENSAPLG00000014418	POP1	100	62.749	ENSNLEG00000002541	POP1	92	62.749	Nomascus_leucogenys
ENSAPLG00000014418	POP1	100	55.016	ENSMEUG00000003118	POP1	97	55.274	Notamacropus_eugenii
ENSAPLG00000014418	POP1	99	60.986	ENSOPRG00000007667	POP1	92	60.986	Ochotona_princeps
ENSAPLG00000014418	POP1	99	60.339	ENSODEG00000003984	POP1	92	60.828	Octodon_degus
ENSAPLG00000014418	POP1	99	49.843	ENSONIG00000016445	pop1	93	49.584	Oreochromis_niloticus
ENSAPLG00000014418	POP1	55	82.609	ENSOANG00000001278	-	82	79.012	Ornithorhynchus_anatinus
ENSAPLG00000014418	POP1	99	61.006	ENSOCUG00000017400	POP1	92	61.216	Oryctolagus_cuniculus
ENSAPLG00000014418	POP1	99	50.158	ENSORLG00000002839	pop1	95	50.158	Oryzias_latipes
ENSAPLG00000014418	POP1	97	49.730	ENSORLG00020022450	POP1	96	49.356	Oryzias_latipes_hni
ENSAPLG00000014418	POP1	99	50.158	ENSORLG00015012746	POP1	95	49.843	Oryzias_latipes_hsok
ENSAPLG00000014418	POP1	99	50.905	ENSOMEG00000006915	pop1	95	50.907	Oryzias_melastigma
ENSAPLG00000014418	POP1	100	61.579	ENSOGAG00000001466	POP1	92	61.960	Otolemur_garnettii
ENSAPLG00000014418	POP1	100	63.512	ENSPPAG00000018410	POP1	92	63.512	Pan_paniscus
ENSAPLG00000014418	POP1	99	62.222	ENSPPRG00000005002	POP1	92	62.354	Panthera_pardus
ENSAPLG00000014418	POP1	99	62.222	ENSPTIG00000016527	POP1	92	62.222	Panthera_tigris_altaica
ENSAPLG00000014418	POP1	100	63.617	ENSPTRG00000020458	POP1	92	63.617	Pan_troglodytes
ENSAPLG00000014418	POP1	100	62.749	ENSPANG00000009704	POP1	92	62.959	Papio_anubis
ENSAPLG00000014418	POP1	99	52.270	ENSPKIG00000016325	POP1	93	52.114	Paramormyrops_kingsleyae
ENSAPLG00000014418	POP1	99	71.166	ENSPSIG00000012343	POP1	91	71.368	Pelodiscus_sinensis
ENSAPLG00000014418	POP1	98	48.523	ENSPMGG00000022253	POP1	96	48.629	Periophthalmus_magnuspinnatus
ENSAPLG00000014418	POP1	99	58.969	ENSPEMG00000023633	Pop1	92	58.969	Peromyscus_maniculatus_bairdii
ENSAPLG00000014418	POP1	97	43.098	ENSPMAG00000003209	POP1	99	42.993	Petromyzon_marinus
ENSAPLG00000014418	POP1	100	61.814	ENSPCIG00000012216	POP1	92	62.036	Phascolarctos_cinereus
ENSAPLG00000014418	POP1	99	50.372	ENSPFOG00000012490	POP1	94	50.265	Poecilia_formosa
ENSAPLG00000014418	POP1	99	50.053	ENSPLAG00000004646	POP1	94	49.947	Poecilia_latipinna
ENSAPLG00000014418	POP1	99	50.372	ENSPMEG00000019592	POP1	94	50.265	Poecilia_mexicana
ENSAPLG00000014418	POP1	99	50.212	ENSPREG00000020951	POP1	93	50.053	Poecilia_reticulata
ENSAPLG00000014418	POP1	100	62.786	ENSPPYG00000018777	POP1	92	62.786	Pongo_abelii
ENSAPLG00000014418	POP1	100	60.127	ENSPCAG00000016662	POP1	92	59.158	Procavia_capensis
ENSAPLG00000014418	POP1	100	63.224	ENSPCOG00000019420	POP1	92	63.330	Propithecus_coquereli
ENSAPLG00000014418	POP1	99	61.925	ENSPVAG00000014468	POP1	92	62.286	Pteropus_vampyrus
ENSAPLG00000014418	POP1	97	48.537	ENSPNYG00000004476	pop1	94	48.710	Pundamilia_nyererei
ENSAPLG00000014418	POP1	99	44.235	ENSPNAG00000000265	pop1	95	43.881	Pygocentrus_nattereri
ENSAPLG00000014418	POP1	99	59.725	ENSRNOG00000005243	Pop1	92	59.831	Rattus_norvegicus
ENSAPLG00000014418	POP1	100	63.064	ENSRBIG00000007996	POP1	92	62.959	Rhinopithecus_bieti
ENSAPLG00000014418	POP1	100	62.959	ENSRROG00000012334	POP1	92	62.854	Rhinopithecus_roxellana
ENSAPLG00000014418	POP1	100	62.069	ENSSBOG00000020830	POP1	93	62.069	Saimiri_boliviensis_boliviensis
ENSAPLG00000014418	POP1	100	62.959	ENSSHAG00000000296	POP1	92	62.749	Sarcophilus_harrisii
ENSAPLG00000014418	POP1	99	50.477	ENSSFOG00015007429	pop1	92	50.266	Scleropages_formosus
ENSAPLG00000014418	POP1	91	53.438	ENSSMAG00000010467	POP1	97	48.580	Scophthalmus_maximus
ENSAPLG00000014418	POP1	99	48.763	ENSSDUG00000007817	POP1	93	49.174	Seriola_dumerili
ENSAPLG00000014418	POP1	99	49.381	ENSSLDG00000012565	POP1	93	49.638	Seriola_lalandi_dorsalis
ENSAPLG00000014418	POP1	100	66.239	ENSSPUG00000003550	-	92	66.453	Sphenodon_punctatus
ENSAPLG00000014418	POP1	97	50.875	ENSSPAG00000014955	pop1	94	51.313	Stegastes_partitus
ENSAPLG00000014418	POP1	100	61.587	ENSSSCG00000006078	POP1	92	61.587	Sus_scrofa
ENSAPLG00000014418	POP1	99	73.876	ENSTGUG00000012011	-	100	74.090	Taeniopygia_guttata
ENSAPLG00000014418	POP1	98	47.752	ENSTRUG00000010856	pop1	94	47.752	Takifugu_rubripes
ENSAPLG00000014418	POP1	99	47.794	ENSTNIG00000013297	pop1	98	47.904	Tetraodon_nigroviridis
ENSAPLG00000014418	POP1	99	59.411	ENSTBEG00000014214	POP1	96	59.259	Tupaia_belangeri
ENSAPLG00000014418	POP1	99	60.191	ENSTTRG00000016071	POP1	92	60.339	Tursiops_truncatus
ENSAPLG00000014418	POP1	100	61.595	ENSUAMG00000017309	POP1	96	61.635	Ursus_americanus
ENSAPLG00000014418	POP1	91	79.518	ENSUMAG00000016952	POP1	91	79.518	Ursus_maritimus
ENSAPLG00000014418	POP1	81	74.611	ENSVPAG00000008278	POP1	74	74.611	Vicugna_pacos
ENSAPLG00000014418	POP1	100	62.566	ENSVVUG00000010994	POP1	92	62.818	Vulpes_vulpes
ENSAPLG00000014418	POP1	97	46.389	ENSXCOG00000017043	POP1	90	46.304	Xiphophorus_couchianus
ENSAPLG00000014418	POP1	99	49.841	ENSXMAG00000002472	POP1	94	49.523	Xiphophorus_maculatus