EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000014472 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 3410 bases
Position: chrKB742697.1:153661-157070
Accession: 101799354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000014318	RRM_1	PF00076.22	2.1e-22	1	2
ENSAPLP00000014318	RRM_1	PF00076.22	2.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000015095	SRSF6-201	1289	XM_005014166	ENSAPLP00000014318	312 (aa)	XP_005014223	U3J491

Gene Model

Click here to download ENSAPLG00000014472's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03040	Spliceosome	KEGG
apla05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000014472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000014472	SRSF6	92	61.168	ENSACIG00000020091	-	68	72.826	Amphilophus_citrinellus
ENSAPLG00000014472	SRSF6	93	85.567	ENSACAG00000002061	SRSF6	82	85.567	Anolis_carolinensis
ENSAPLG00000014472	SRSF6	88	62.191	ENSELUG00000024182	SRSF6	64	73.563	Esox_lucius
ENSAPLG00000014472	SRSF6	92	59.028	ENSELUG00000013506	SRSF6	50	84.247	Esox_lucius
ENSAPLG00000014472	SRSF6	84	98.092	ENSFALG00000012776	SRSF6	99	98.092	Ficedula_albicollis
ENSAPLG00000014472	SRSF6	100	97.143	ENSGALG00000000990	SRSF6	90	97.143	Gallus_gallus
ENSAPLG00000014472	SRSF6	74	94.828	ENSMGAG00000000888	SRSF6	84	93.939	Meleagris_gallopavo
ENSAPLG00000014472	SRSF6	88	69.424	ENSONIG00000001925	-	61	59.361	Oreochromis_niloticus
ENSAPLG00000014472	SRSF6	62	52.850	ENSOCUG00000023999	-	56	53.020	Oryctolagus_cuniculus
ENSAPLG00000014472	SRSF6	92	65.595	ENSPKIG00000018463	-	53	85.811	Paramormyrops_kingsleyae
ENSAPLG00000014472	SRSF6	88	62.284	ENSPLAG00000009243	srsf6a	57	80.220	Poecilia_latipinna
ENSAPLG00000014472	SRSF6	73	67.241	ENSSPAG00000002362	srsf6a	54	86.842	Stegastes_partitus
ENSAPLG00000014472	SRSF6	100	98.718	ENSTGUG00000003455	SRSF6	90	98.718	Taeniopygia_guttata