EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000015231 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 48880 bases
Position: chrKB743158.1:2214665-2263544
Accession: 101799304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000015130	R3H	PF01424.22	7.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000015922	R3HDM1-201	3273	XM_005020296	ENSAPLP00000015130	1090 (aa)	-	U3J6K3

Gene Model

Click here to download ENSAPLG00000015231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000015231's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000015231	R3HDM1	100	51.077	ENSAPLG00000004298	R3HDM2	100	51.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000015231	R3HDM1	100	78.952	ENSG00000048991	R3HDM1	100	78.681	Homo_sapiens
ENSAPLG00000015231	R3HDM1	89	47.963	ENSAPOG00000020850	r3hdm1	97	47.204	Acanthochromis_polyacanthus
ENSAPLG00000015231	R3HDM1	100	79.603	ENSAMEG00000014886	R3HDM1	100	79.513	Ailuropoda_melanoleuca
ENSAPLG00000015231	R3HDM1	89	47.359	ENSAOCG00000005192	r3hdm1	99	46.789	Amphiprion_ocellaris
ENSAPLG00000015231	R3HDM1	89	45.977	ENSAPEG00000016108	r3hdm1	99	45.920	Amphiprion_percula
ENSAPLG00000015231	R3HDM1	89	46.073	ENSATEG00000000232	r3hdm1	99	45.753	Anabas_testudineus
ENSAPLG00000015231	R3HDM1	100	82.379	ENSACAG00000001676	R3HDM1	100	82.731	Anolis_carolinensis
ENSAPLG00000015231	R3HDM1	100	79.152	ENSANAG00000035334	R3HDM1	100	78.971	Aotus_nancymaae
ENSAPLG00000015231	R3HDM1	80	48.775	ENSACLG00000027282	r3hdm1	95	47.899	Astatotilapia_calliptera
ENSAPLG00000015231	R3HDM1	88	71.429	ENSAMXG00000003536	r3hdm1	94	71.350	Astyanax_mexicanus
ENSAPLG00000015231	R3HDM1	92	71.703	ENSAMXG00000012861	R3HDM1	100	62.345	Astyanax_mexicanus
ENSAPLG00000015231	R3HDM1	100	76.984	ENSBTAG00000013302	R3HDM1	100	77.337	Bos_taurus
ENSAPLG00000015231	R3HDM1	100	78.933	ENSCJAG00000011718	R3HDM1	100	78.752	Callithrix_jacchus
ENSAPLG00000015231	R3HDM1	100	79.964	ENSCAFG00000005075	R3HDM1	100	79.874	Canis_familiaris
ENSAPLG00000015231	R3HDM1	100	79.874	ENSCAFG00020016119	R3HDM1	100	79.783	Canis_lupus_dingo
ENSAPLG00000015231	R3HDM1	100	79.382	ENSCHIG00000020851	R3HDM1	100	79.382	Capra_hircus
ENSAPLG00000015231	R3HDM1	100	75.263	ENSCPOG00000012784	R3HDM1	100	74.912	Cavia_porcellus
ENSAPLG00000015231	R3HDM1	100	78.410	ENSCCAG00000027199	R3HDM1	100	78.229	Cebus_capucinus
ENSAPLG00000015231	R3HDM1	99	84.466	ENSCATG00000023642	R3HDM1	100	78.771	Cercocebus_atys
ENSAPLG00000015231	R3HDM1	100	75.154	ENSCLAG00000007962	R3HDM1	100	77.076	Chinchilla_lanigera
ENSAPLG00000015231	R3HDM1	100	75.983	ENSCSAG00000016356	R3HDM1	100	76.626	Chlorocebus_sabaeus
ENSAPLG00000015231	R3HDM1	87	69.482	ENSCHOG00000013638	R3HDM1	91	68.937	Choloepus_hoffmanni
ENSAPLG00000015231	R3HDM1	88	88.970	ENSCPBG00000009645	R3HDM1	100	95.203	Chrysemys_picta_bellii
ENSAPLG00000015231	R3HDM1	100	79.061	ENSCANG00000034748	R3HDM1	100	78.791	Colobus_angolensis_palliatus
ENSAPLG00000015231	R3HDM1	99	75.330	ENSCGRG00001012357	R3hdm1	97	75.880	Cricetulus_griseus_chok1gshd
ENSAPLG00000015231	R3HDM1	99	78.029	ENSCGRG00000012080	R3hdm1	100	79.070	Cricetulus_griseus_crigri
ENSAPLG00000015231	R3HDM1	89	43.985	ENSCSEG00000008944	r3hdm1	99	44.875	Cynoglossus_semilaevis
ENSAPLG00000015231	R3HDM1	89	47.500	ENSCVAG00000007582	r3hdm1	99	46.839	Cyprinodon_variegatus
ENSAPLG00000015231	R3HDM1	68	36.548	ENSDARG00000061081	arpp21	95	36.585	Danio_rerio
ENSAPLG00000015231	R3HDM1	100	76.646	ENSDNOG00000000771	R3HDM1	100	76.555	Dasypus_novemcinctus
ENSAPLG00000015231	R3HDM1	100	70.380	ENSETEG00000013606	R3HDM1	100	70.652	Echinops_telfairi
ENSAPLG00000015231	R3HDM1	60	43.165	ENSEBUG00000014746	arpp21	97	43.838	Eptatretus_burgeri
ENSAPLG00000015231	R3HDM1	100	79.891	ENSEASG00005007392	R3HDM1	100	79.710	Equus_asinus_asinus
ENSAPLG00000015231	R3HDM1	100	79.747	ENSECAG00000019114	R3HDM1	100	79.566	Equus_caballus
ENSAPLG00000015231	R3HDM1	87	74.586	ENSEEUG00000012589	R3HDM1	83	75.388	Erinaceus_europaeus
ENSAPLG00000015231	R3HDM1	93	52.368	ENSELUG00000014413	r3hdm1	100	53.973	Esox_lucius
ENSAPLG00000015231	R3HDM1	94	56.372	ENSELUG00000004909	R3HDM1	99	56.917	Esox_lucius
ENSAPLG00000015231	R3HDM1	100	79.891	ENSFCAG00000027113	R3HDM1	100	79.801	Felis_catus
ENSAPLG00000015231	R3HDM1	74	84.123	ENSFALG00000013731	R3HDM1	95	79.118	Ficedula_albicollis
ENSAPLG00000015231	R3HDM1	100	75.175	ENSFDAG00000016478	R3HDM1	100	78.073	Fukomys_damarensis
ENSAPLG00000015231	R3HDM1	89	45.896	ENSFHEG00000018713	r3hdm1	100	47.692	Fundulus_heteroclitus
ENSAPLG00000015231	R3HDM1	62	61.089	ENSGMOG00000006042	-	81	60.338	Gadus_morhua
ENSAPLG00000015231	R3HDM1	92	86.667	ENSGALG00000012246	R3HDM1	99	95.207	Gallus_gallus
ENSAPLG00000015231	R3HDM1	78	48.922	ENSGAFG00000006203	r3hdm1	94	49.087	Gambusia_affinis
ENSAPLG00000015231	R3HDM1	86	47.555	ENSGACG00000014925	r3hdm1	99	47.449	Gasterosteus_aculeatus
ENSAPLG00000015231	R3HDM1	100	87.226	ENSGAGG00000007840	R3HDM1	100	86.953	Gopherus_agassizii
ENSAPLG00000015231	R3HDM1	100	79.313	ENSGGOG00000008156	R3HDM1	100	79.042	Gorilla_gorilla
ENSAPLG00000015231	R3HDM1	100	75.264	ENSHGLG00000015718	R3HDM1	100	77.409	Heterocephalus_glaber_female
ENSAPLG00000015231	R3HDM1	100	59.165	ENSHGLG00100015374	-	100	59.074	Heterocephalus_glaber_male
ENSAPLG00000015231	R3HDM1	100	75.088	ENSHGLG00100003184	-	100	77.409	Heterocephalus_glaber_male
ENSAPLG00000015231	R3HDM1	80	43.150	ENSHCOG00000013366	r3hdm1	88	59.250	Hippocampus_comes
ENSAPLG00000015231	R3HDM1	89	58.466	ENSIPUG00000001676	R3HDM1	99	66.429	Ictalurus_punctatus
ENSAPLG00000015231	R3HDM1	85	68.976	ENSIPUG00000013629	r3hdm1	95	70.625	Ictalurus_punctatus
ENSAPLG00000015231	R3HDM1	100	79.494	ENSSTOG00000007572	R3HDM1	100	80.066	Ictidomys_tridecemlineatus
ENSAPLG00000015231	R3HDM1	95	75.760	ENSLACG00000005334	R3HDM1	99	76.362	Latimeria_chalumnae
ENSAPLG00000015231	R3HDM1	100	69.569	ENSLOCG00000001641	r3hdm1	100	69.272	Lepisosteus_oculatus
ENSAPLG00000015231	R3HDM1	100	77.397	ENSLAFG00000009065	R3HDM1	100	77.221	Loxodonta_africana
ENSAPLG00000015231	R3HDM1	100	79.313	ENSMFAG00000030331	R3HDM1	100	79.042	Macaca_fascicularis
ENSAPLG00000015231	R3HDM1	100	79.133	ENSMMUG00000009844	R3HDM1	100	78.862	Macaca_mulatta
ENSAPLG00000015231	R3HDM1	100	79.223	ENSMNEG00000027793	R3HDM1	100	78.952	Macaca_nemestrina
ENSAPLG00000015231	R3HDM1	100	79.313	ENSMLEG00000043189	R3HDM1	100	79.042	Mandrillus_leucophaeus
ENSAPLG00000015231	R3HDM1	89	49.182	ENSMAMG00000004532	r3hdm1	99	48.335	Mastacembelus_armatus
ENSAPLG00000015231	R3HDM1	89	48.073	ENSMZEG00005003157	r3hdm1	99	47.288	Maylandia_zebra
ENSAPLG00000015231	R3HDM1	100	96.154	ENSMGAG00000012461	R3HDM1	100	96.154	Meleagris_gallopavo
ENSAPLG00000015231	R3HDM1	100	75.394	ENSMAUG00000010315	R3hdm1	100	79.402	Mesocricetus_auratus
ENSAPLG00000015231	R3HDM1	88	75.921	ENSMICG00000042655	-	100	75.862	Microcebus_murinus
ENSAPLG00000015231	R3HDM1	100	77.658	ENSMICG00000005900	-	100	77.568	Microcebus_murinus
ENSAPLG00000015231	R3HDM1	50	83.241	ENSMOCG00000019833	-	100	79.070	Microtus_ochrogaster
ENSAPLG00000015231	R3HDM1	90	77.137	ENSMODG00000000923	R3HDM1	97	77.329	Monodelphis_domestica
ENSAPLG00000015231	R3HDM1	99	46.731	ENSMALG00000009000	r3hdm1	99	45.939	Monopterus_albus
ENSAPLG00000015231	R3HDM1	100	74.648	MGP_CAROLIEiJ_G0014543	R3hdm1	100	79.070	Mus_caroli
ENSAPLG00000015231	R3HDM1	100	74.472	ENSMUSG00000056211	R3hdm1	100	79.070	Mus_musculus
ENSAPLG00000015231	R3HDM1	100	74.472	MGP_PahariEiJ_G0027779	R3hdm1	100	78.738	Mus_pahari
ENSAPLG00000015231	R3HDM1	100	74.472	MGP_SPRETEiJ_G0015350	R3hdm1	100	79.070	Mus_spretus
ENSAPLG00000015231	R3HDM1	100	79.656	ENSMPUG00000002412	R3HDM1	100	79.566	Mustela_putorius_furo
ENSAPLG00000015231	R3HDM1	100	78.668	ENSMLUG00000013824	R3HDM1	100	78.488	Myotis_lucifugus
ENSAPLG00000015231	R3HDM1	100	79.042	ENSNLEG00000008622	R3HDM1	100	78.771	Nomascus_leucogenys
ENSAPLG00000015231	R3HDM1	89	70.945	ENSMEUG00000011784	R3HDM1	99	71.150	Notamacropus_eugenii
ENSAPLG00000015231	R3HDM1	100	74.605	ENSODEG00000008607	R3HDM1	100	78.073	Octodon_degus
ENSAPLG00000015231	R3HDM1	94	47.516	ENSONIG00000012017	r3hdm1	99	46.964	Oreochromis_niloticus
ENSAPLG00000015231	R3HDM1	100	80.909	ENSOANG00000007987	R3HDM1	100	81.545	Ornithorhynchus_anatinus
ENSAPLG00000015231	R3HDM1	89	78.499	ENSOCUG00000017366	R3HDM1	98	78.296	Oryctolagus_cuniculus
ENSAPLG00000015231	R3HDM1	89	44.912	ENSORLG00000004297	r3hdm1	99	44.956	Oryzias_latipes
ENSAPLG00000015231	R3HDM1	89	46.875	ENSORLG00015017355	r3hdm1	99	47.007	Oryzias_latipes_hsok
ENSAPLG00000015231	R3HDM1	100	78.643	ENSOGAG00000003136	R3HDM1	100	78.752	Otolemur_garnettii
ENSAPLG00000015231	R3HDM1	100	79.273	ENSOARG00000010788	R3HDM1	100	79.273	Ovis_aries
ENSAPLG00000015231	R3HDM1	100	78.810	ENSPPAG00000027858	R3HDM1	100	78.539	Pan_paniscus
ENSAPLG00000015231	R3HDM1	100	79.710	ENSPPRG00000002626	R3HDM1	100	79.620	Panthera_pardus
ENSAPLG00000015231	R3HDM1	100	79.801	ENSPTIG00000016581	R3HDM1	100	79.710	Panthera_tigris_altaica
ENSAPLG00000015231	R3HDM1	100	78.720	ENSPTRG00000012494	R3HDM1	100	78.449	Pan_troglodytes
ENSAPLG00000015231	R3HDM1	100	79.313	ENSPANG00000026448	R3HDM1	100	79.042	Papio_anubis
ENSAPLG00000015231	R3HDM1	92	68.148	ENSPKIG00000004328	r3hdm1	96	59.754	Paramormyrops_kingsleyae
ENSAPLG00000015231	R3HDM1	100	86.770	ENSPSIG00000012915	R3HDM1	100	87.226	Pelodiscus_sinensis
ENSAPLG00000015231	R3HDM1	100	75.528	ENSPEMG00000015187	R3hdm1	100	79.070	Peromyscus_maniculatus_bairdii
ENSAPLG00000015231	R3HDM1	87	44.359	ENSPMAG00000003369	-	99	44.520	Petromyzon_marinus
ENSAPLG00000015231	R3HDM1	100	82.337	ENSPCIG00000002491	R3HDM1	100	82.337	Phascolarctos_cinereus
ENSAPLG00000015231	R3HDM1	89	46.075	ENSPFOG00000015036	r3hdm1	99	46.097	Poecilia_formosa
ENSAPLG00000015231	R3HDM1	78	49.352	ENSPLAG00000018042	r3hdm1	94	49.085	Poecilia_latipinna
ENSAPLG00000015231	R3HDM1	78	49.189	ENSPMEG00000023947	r3hdm1	94	48.922	Poecilia_mexicana
ENSAPLG00000015231	R3HDM1	89	47.081	ENSPREG00000007902	r3hdm1	88	62.648	Poecilia_reticulata
ENSAPLG00000015231	R3HDM1	100	78.249	ENSPPYG00000012815	R3HDM1	100	77.978	Pongo_abelii
ENSAPLG00000015231	R3HDM1	100	68.297	ENSPCAG00000006208	R3HDM1	100	68.841	Procavia_capensis
ENSAPLG00000015231	R3HDM1	100	76.534	ENSPCOG00000012698	R3HDM1	100	75.874	Propithecus_coquereli
ENSAPLG00000015231	R3HDM1	100	71.081	ENSPVAG00000006098	R3HDM1	100	70.901	Pteropus_vampyrus
ENSAPLG00000015231	R3HDM1	66	37.466	ENSPNAG00000004162	arpp21	92	36.716	Pygocentrus_nattereri
ENSAPLG00000015231	R3HDM1	100	57.821	ENSPNAG00000013952	r3hdm1	100	65.493	Pygocentrus_nattereri
ENSAPLG00000015231	R3HDM1	100	74.120	ENSRNOG00000004099	R3hdm1	100	74.582	Rattus_norvegicus
ENSAPLG00000015231	R3HDM1	100	77.908	ENSRBIG00000033317	R3HDM1	100	80.082	Rhinopithecus_bieti
ENSAPLG00000015231	R3HDM1	100	78.520	ENSRROG00000034534	R3HDM1	100	78.700	Rhinopithecus_roxellana
ENSAPLG00000015231	R3HDM1	100	78.862	ENSSBOG00000020389	R3HDM1	100	78.681	Saimiri_boliviensis_boliviensis
ENSAPLG00000015231	R3HDM1	100	82.712	ENSSHAG00000016999	R3HDM1	100	82.894	Sarcophilus_harrisii
ENSAPLG00000015231	R3HDM1	100	59.013	ENSSFOG00015019851	-	99	60.019	Scleropages_formosus
ENSAPLG00000015231	R3HDM1	93	69.575	ENSSFOG00015014134	r3hdm1	100	70.388	Scleropages_formosus
ENSAPLG00000015231	R3HDM1	99	44.216	ENSSMAG00000001669	r3hdm1	99	43.697	Scophthalmus_maximus
ENSAPLG00000015231	R3HDM1	89	46.943	ENSSDUG00000010749	r3hdm1	99	46.987	Seriola_dumerili
ENSAPLG00000015231	R3HDM1	99	46.285	ENSSLDG00000004499	r3hdm1	99	46.484	Seriola_lalandi_dorsalis
ENSAPLG00000015231	R3HDM1	70	71.096	ENSSARG00000000352	-	69	71.096	Sorex_araneus
ENSAPLG00000015231	R3HDM1	100	87.945	ENSSPUG00000004167	R3HDM1	100	87.945	Sphenodon_punctatus
ENSAPLG00000015231	R3HDM1	89	48.904	ENSSPAG00000004648	r3hdm1	99	48.162	Stegastes_partitus
ENSAPLG00000015231	R3HDM1	100	79.729	ENSSSCG00000015692	R3HDM1	100	79.548	Sus_scrofa
ENSAPLG00000015231	R3HDM1	100	86.185	ENSTGUG00000011750	R3HDM1	100	86.276	Taeniopygia_guttata
ENSAPLG00000015231	R3HDM1	78	46.467	ENSTRUG00000011654	r3hdm1	92	45.599	Takifugu_rubripes
ENSAPLG00000015231	R3HDM1	87	46.497	ENSTNIG00000010362	r3hdm1	99	46.240	Tetraodon_nigroviridis
ENSAPLG00000015231	R3HDM1	100	74.319	ENSTTRG00000003935	R3HDM1	100	74.138	Tursiops_truncatus
ENSAPLG00000015231	R3HDM1	70	80.359	ENSUAMG00000024806	R3HDM1	94	82.946	Ursus_americanus
ENSAPLG00000015231	R3HDM1	100	76.018	ENSUMAG00000005552	R3HDM1	100	75.928	Ursus_maritimus
ENSAPLG00000015231	R3HDM1	93	76.836	ENSVPAG00000007333	R3HDM1	93	76.629	Vicugna_pacos
ENSAPLG00000015231	R3HDM1	100	77.924	ENSVVUG00000006457	R3HDM1	100	77.836	Vulpes_vulpes
ENSAPLG00000015231	R3HDM1	89	70.020	ENSXETG00000019330	r3hdm1	100	69.919	Xenopus_tropicalis
ENSAPLG00000015231	R3HDM1	67	50.193	ENSXCOG00000017448	r3hdm1	94	50.644	Xiphophorus_couchianus
ENSAPLG00000015231	R3HDM1	89	46.255	ENSXMAG00000007885	r3hdm1	99	45.818	Xiphophorus_maculatus