EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000015592 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 40801 bases
Position: chrKB742967.1:535535-576335
Accession: 101791783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000015492	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000016290	CHD6-201	8067	XM_005018061	ENSAPLP00000015492	2688 (aa)	-	U3J7L5

Gene Model

Click here to download ENSAPLG00000015592's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000015592's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000015592	CHD6	83	62.082	ENSAPLG00000002826	CHD9	64	66.036
ENSAPLG00000015592	CHD6	75	67.798	ENSAPLG00000005873	CHD7	71	65.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000015592	CHD6	100	72.442	ENSG00000124177	CHD6	99	93.411	Homo_sapiens
ENSAPLG00000015592	CHD6	75	76.222	ENSAPOG00000013736	chd6	66	76.018	Acanthochromis_polyacanthus
ENSAPLG00000015592	CHD6	100	72.578	ENSAMEG00000009496	CHD6	99	71.867	Ailuropoda_melanoleuca
ENSAPLG00000015592	CHD6	78	73.022	ENSATEG00000005608	chd6	63	77.854	Anabas_testudineus
ENSAPLG00000015592	CHD6	99	72.584	ENSACAG00000006842	CHD6	99	72.365	Anolis_carolinensis
ENSAPLG00000015592	CHD6	99	72.275	ENSANAG00000037548	CHD6	99	89.541	Aotus_nancymaae
ENSAPLG00000015592	CHD6	77	73.698	ENSAMXG00000009576	chd6	74	73.574	Astyanax_mexicanus
ENSAPLG00000015592	CHD6	99	72.010	ENSBTAG00000005733	CHD6	99	71.355	Bos_taurus
ENSAPLG00000015592	CHD6	100	72.647	ENSCJAG00000017920	CHD6	99	89.725	Callithrix_jacchus
ENSAPLG00000015592	CHD6	100	72.797	ENSCAFG00000009236	CHD6	99	71.877	Canis_familiaris
ENSAPLG00000015592	CHD6	99	72.714	ENSCAFG00020012906	CHD6	95	92.085	Canis_lupus_dingo
ENSAPLG00000015592	CHD6	99	71.633	ENSCHIG00000017606	CHD6	99	70.882	Capra_hircus
ENSAPLG00000015592	CHD6	84	72.424	ENSTSYG00000014635	CHD6	63	81.818	Carlito_syrichta
ENSAPLG00000015592	CHD6	100	72.234	ENSCPOG00000015641	CHD6	69	78.575	Cavia_porcellus
ENSAPLG00000015592	CHD6	100	72.479	ENSCCAG00000036828	CHD6	99	89.541	Cebus_capucinus
ENSAPLG00000015592	CHD6	100	72.176	ENSCATG00000039248	CHD6	99	89.541	Cercocebus_atys
ENSAPLG00000015592	CHD6	100	72.505	ENSCLAG00000013743	CHD6	99	71.862	Chinchilla_lanigera
ENSAPLG00000015592	CHD6	100	72.505	ENSCSAG00000013997	CHD6	68	78.629	Chlorocebus_sabaeus
ENSAPLG00000015592	CHD6	90	78.524	ENSCHOG00000012647	CHD6	78	78.218	Choloepus_hoffmanni
ENSAPLG00000015592	CHD6	99	83.141	ENSCPBG00000019382	CHD6	99	82.287	Chrysemys_picta_bellii
ENSAPLG00000015592	CHD6	100	72.594	ENSCANG00000043435	CHD6	99	89.541	Colobus_angolensis_palliatus
ENSAPLG00000015592	CHD6	99	72.000	ENSCGRG00001002694	Chd6	99	71.224	Cricetulus_griseus_chok1gshd
ENSAPLG00000015592	CHD6	84	73.461	ENSDARG00000017244	chd6	81	72.695	Danio_rerio
ENSAPLG00000015592	CHD6	100	72.495	ENSDNOG00000004176	CHD6	68	78.911	Dasypus_novemcinctus
ENSAPLG00000015592	CHD6	99	72.721	ENSEASG00005023433	CHD6	95	94.015	Equus_asinus_asinus
ENSAPLG00000015592	CHD6	100	72.973	ENSECAG00000011761	CHD6	68	79.187	Equus_caballus
ENSAPLG00000015592	CHD6	76	79.176	ENSELUG00000012309	chd6	91	79.176	Esox_lucius
ENSAPLG00000015592	CHD6	100	72.757	ENSFCAG00000003572	CHD6	99	71.934	Felis_catus
ENSAPLG00000015592	CHD6	99	86.901	ENSFALG00000012563	CHD6	98	86.806	Ficedula_albicollis
ENSAPLG00000015592	CHD6	99	72.790	ENSFDAG00000013791	CHD6	68	78.801	Fukomys_damarensis
ENSAPLG00000015592	CHD6	74	69.907	ENSGMOG00000011715	chd6	80	69.979	Gadus_morhua
ENSAPLG00000015592	CHD6	79	71.948	ENSGACG00000000037	chd6	83	72.201	Gasterosteus_aculeatus
ENSAPLG00000015592	CHD6	100	72.352	ENSGGOG00000013123	CHD6	99	89.541	Gorilla_gorilla
ENSAPLG00000015592	CHD6	77	73.784	ENSHBUG00000014701	chd6	62	77.595	Haplochromis_burtoni
ENSAPLG00000015592	CHD6	100	72.564	ENSHGLG00000004548	CHD6	69	78.617	Heterocephalus_glaber_female
ENSAPLG00000015592	CHD6	100	72.564	ENSHGLG00100006401	CHD6	68	78.617	Heterocephalus_glaber_male
ENSAPLG00000015592	CHD6	76	78.391	ENSIPUG00000003692	chd6	74	77.258	Ictalurus_punctatus
ENSAPLG00000015592	CHD6	100	71.888	ENSSTOG00000013382	CHD6	99	71.340	Ictidomys_tridecemlineatus
ENSAPLG00000015592	CHD6	86	77.062	ENSLACG00000010881	CHD6	85	76.556	Latimeria_chalumnae
ENSAPLG00000015592	CHD6	73	81.072	ENSLOCG00000007386	chd6	79	80.600	Lepisosteus_oculatus
ENSAPLG00000015592	CHD6	99	73.155	ENSLAFG00000012144	CHD6	70	78.339	Loxodonta_africana
ENSAPLG00000015592	CHD6	99	72.587	ENSMFAG00000032830	CHD6	99	89.541	Macaca_fascicularis
ENSAPLG00000015592	CHD6	99	72.587	ENSMMUG00000020458	CHD6	99	89.541	Macaca_mulatta
ENSAPLG00000015592	CHD6	99	72.410	ENSMNEG00000040847	CHD6	99	89.541	Macaca_nemestrina
ENSAPLG00000015592	CHD6	99	72.578	ENSMLEG00000031965	CHD6	99	89.541	Mandrillus_leucophaeus
ENSAPLG00000015592	CHD6	77	74.029	ENSMAMG00000013111	chd6	63	71.281	Mastacembelus_armatus
ENSAPLG00000015592	CHD6	99	89.697	ENSMGAG00000001121	CHD6	99	89.454	Meleagris_gallopavo
ENSAPLG00000015592	CHD6	99	72.238	ENSMICG00000016641	CHD6	99	89.174	Microcebus_murinus
ENSAPLG00000015592	CHD6	89	75.677	ENSMODG00000000720	-	94	83.521	Monodelphis_domestica
ENSAPLG00000015592	CHD6	99	71.497	MGP_CAROLIEiJ_G0024604	Chd6	99	85.362	Mus_caroli
ENSAPLG00000015592	CHD6	100	71.570	ENSMUSG00000057133	Chd6	99	85.191	Mus_musculus
ENSAPLG00000015592	CHD6	99	71.497	MGP_PahariEiJ_G0026048	Chd6	99	85.532	Mus_pahari
ENSAPLG00000015592	CHD6	100	71.528	MGP_SPRETEiJ_G0025526	Chd6	99	85.277	Mus_spretus
ENSAPLG00000015592	CHD6	100	72.285	ENSMPUG00000017695	CHD6	99	71.470	Mustela_putorius_furo
ENSAPLG00000015592	CHD6	78	73.732	ENSNBRG00000013839	chd6	75	76.902	Neolamprologus_brichardi
ENSAPLG00000015592	CHD6	99	71.235	ENSNLEG00000006496	CHD6	99	70.337	Nomascus_leucogenys
ENSAPLG00000015592	CHD6	99	70.055	ENSOPRG00000013376	-	68	76.043	Ochotona_princeps
ENSAPLG00000015592	CHD6	80	75.676	ENSONIG00000000393	chd6	82	75.632	Oreochromis_niloticus
ENSAPLG00000015592	CHD6	99	66.474	ENSOANG00000014347	CHD6	94	70.118	Ornithorhynchus_anatinus
ENSAPLG00000015592	CHD6	99	71.470	ENSOCUG00000012394	CHD6	99	70.614	Oryctolagus_cuniculus
ENSAPLG00000015592	CHD6	76	75.400	ENSORLG00020021891	chd6	95	87.174	Oryzias_latipes_hni
ENSAPLG00000015592	CHD6	99	71.340	ENSOGAG00000002427	CHD6	68	78.480	Otolemur_garnettii
ENSAPLG00000015592	CHD6	99	70.059	ENSOARG00000002597	CHD6	68	75.640	Ovis_aries
ENSAPLG00000015592	CHD6	100	72.721	ENSPPRG00000014756	CHD6	99	71.898	Panthera_pardus
ENSAPLG00000015592	CHD6	100	72.684	ENSPTIG00000011094	CHD6	99	71.861	Panthera_tigris_altaica
ENSAPLG00000015592	CHD6	100	72.425	ENSPTRG00000013504	CHD6	99	89.541	Pan_troglodytes
ENSAPLG00000015592	CHD6	100	72.687	ENSPANG00000025554	CHD6	99	89.725	Papio_anubis
ENSAPLG00000015592	CHD6	76	78.382	ENSPKIG00000005578	chd6	75	77.139	Paramormyrops_kingsleyae
ENSAPLG00000015592	CHD6	75	77.098	ENSPMGG00000014877	chd6	86	76.277	Periophthalmus_magnuspinnatus
ENSAPLG00000015592	CHD6	99	73.913	ENSPCIG00000028037	CHD6	93	81.549	Phascolarctos_cinereus
ENSAPLG00000015592	CHD6	72	82.860	ENSPLAG00000003128	chd6	69	74.410	Poecilia_latipinna
ENSAPLG00000015592	CHD6	75	82.692	ENSPREG00000022653	chd6	99	87.546	Poecilia_reticulata
ENSAPLG00000015592	CHD6	100	72.253	ENSPPYG00000011016	CHD6	68	78.522	Pongo_abelii
ENSAPLG00000015592	CHD6	100	72.620	ENSPCOG00000001089	CHD6	99	89.358	Propithecus_coquereli
ENSAPLG00000015592	CHD6	78	75.842	ENSPNYG00000022516	chd6	75	79.117	Pundamilia_nyererei
ENSAPLG00000015592	CHD6	74	75.231	ENSPNAG00000012825	chd6	72	75.066	Pygocentrus_nattereri
ENSAPLG00000015592	CHD6	99	71.470	ENSRNOG00000016744	Chd6	99	70.586	Rattus_norvegicus
ENSAPLG00000015592	CHD6	100	72.392	ENSSBOG00000022089	CHD6	99	89.541	Saimiri_boliviensis_boliviensis
ENSAPLG00000015592	CHD6	99	74.448	ENSSHAG00000017072	CHD6	93	81.226	Sarcophilus_harrisii
ENSAPLG00000015592	CHD6	57	76.163	ENSSFOG00015012920	chd6	60	72.689	Scleropages_formosus
ENSAPLG00000015592	CHD6	57	98.684	ENSSARG00000002615	-	58	98.684	Sorex_araneus
ENSAPLG00000015592	CHD6	98	75.806	ENSSSCG00000007360	CHD6	99	75.912	Sus_scrofa
ENSAPLG00000015592	CHD6	97	88.394	ENSTGUG00000003179	CHD6	100	88.330	Taeniopygia_guttata
ENSAPLG00000015592	CHD6	73	77.208	ENSTNIG00000017487	chd6	83	75.659	Tetraodon_nigroviridis
ENSAPLG00000015592	CHD6	99	70.084	ENSTTRG00000013438	CHD6	93	75.895	Tursiops_truncatus
ENSAPLG00000015592	CHD6	99	71.512	ENSUAMG00000024036	CHD6	95	92.085	Ursus_americanus
ENSAPLG00000015592	CHD6	99	72.634	ENSUMAG00000002017	CHD6	95	92.085	Ursus_maritimus
ENSAPLG00000015592	CHD6	86	79.697	ENSVPAG00000007941	CHD6	85	78.458	Vicugna_pacos
ENSAPLG00000015592	CHD6	100	72.844	ENSVVUG00000029164	CHD6	99	71.851	Vulpes_vulpes
ENSAPLG00000015592	CHD6	82	75.255	ENSXETG00000021445	chd6	87	72.522	Xenopus_tropicalis