EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000015811 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 32819 bases
Position: chrKB742446.1:510875-543693
Accession: 101800923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000015728	EST1	PF10374.9	4.1e-25	1	1
ENSAPLP00000015728	EST1_DNA_bind	PF10373.9	9.6e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000016529	SMG7-201	3426	XM_005009831	ENSAPLP00000015728	1141 (aa)	XP_005009888	U3J8A0

Gene Model

Click here to download ENSAPLG00000015811's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000015811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000015811	SMG7	100	88.801	ENSG00000116698	SMG7	100	88.976	Homo_sapiens
ENSAPLG00000015811	SMG7	88	74.697	ENSAPOG00000009611	smg7	95	74.697	Acanthochromis_polyacanthus
ENSAPLG00000015811	SMG7	99	88.752	ENSAMEG00000002357	SMG7	99	88.840	Ailuropoda_melanoleuca
ENSAPLG00000015811	SMG7	97	64.292	ENSACIG00000015152	smg7	100	64.114	Amphilophus_citrinellus
ENSAPLG00000015811	SMG7	99	65.810	ENSAOCG00000013538	smg7	99	66.239	Amphiprion_ocellaris
ENSAPLG00000015811	SMG7	99	65.780	ENSAPEG00000007851	smg7	99	66.210	Amphiprion_percula
ENSAPLG00000015811	SMG7	99	65.055	ENSATEG00000006931	smg7	99	65.564	Anabas_testudineus
ENSAPLG00000015811	SMG7	99	85.210	ENSACAG00000014989	SMG7	99	85.714	Anolis_carolinensis
ENSAPLG00000015811	SMG7	100	89.054	ENSANAG00000028114	SMG7	100	89.229	Aotus_nancymaae
ENSAPLG00000015811	SMG7	99	65.120	ENSACLG00000022079	smg7	93	71.000	Astatotilapia_calliptera
ENSAPLG00000015811	SMG7	99	68.963	ENSAMXG00000020809	smg7	99	67.586	Astyanax_mexicanus
ENSAPLG00000015811	SMG7	100	87.752	ENSBTAG00000008003	SMG7	100	87.927	Bos_taurus
ENSAPLG00000015811	SMG7	100	88.967	ENSCJAG00000005135	SMG7	100	88.967	Callithrix_jacchus
ENSAPLG00000015811	SMG7	99	82.333	ENSCAFG00000013276	SMG7	97	82.209	Canis_familiaris
ENSAPLG00000015811	SMG7	99	88.772	ENSCAFG00020015475	SMG7	99	88.860	Canis_lupus_dingo
ENSAPLG00000015811	SMG7	99	81.229	ENSCHIG00000018192	SMG7	99	81.313	Capra_hircus
ENSAPLG00000015811	SMG7	100	88.714	ENSTSYG00000002667	SMG7	100	88.714	Carlito_syrichta
ENSAPLG00000015811	SMG7	99	81.995	ENSCPOG00000008906	SMG7	99	81.029	Cavia_porcellus
ENSAPLG00000015811	SMG7	100	89.054	ENSCCAG00000028596	SMG7	100	89.229	Cebus_capucinus
ENSAPLG00000015811	SMG7	100	88.889	ENSCATG00000011063	SMG7	100	89.064	Cercocebus_atys
ENSAPLG00000015811	SMG7	100	88.101	ENSCLAG00000010751	SMG7	100	88.101	Chinchilla_lanigera
ENSAPLG00000015811	SMG7	99	82.333	ENSCSAG00000012654	SMG7	97	82.293	Chlorocebus_sabaeus
ENSAPLG00000015811	SMG7	92	77.889	ENSCHOG00000010522	SMG7	93	78.344	Choloepus_hoffmanni
ENSAPLG00000015811	SMG7	99	93.662	ENSCPBG00000015724	SMG7	99	93.662	Chrysemys_picta_bellii
ENSAPLG00000015811	SMG7	99	89.409	ENSCANG00000015680	SMG7	99	89.585	Colobus_angolensis_palliatus
ENSAPLG00000015811	SMG7	100	87.314	ENSCGRG00001013705	Smg7	100	87.314	Cricetulus_griseus_chok1gshd
ENSAPLG00000015811	SMG7	99	87.908	ENSCGRG00000018401	Smg7	100	87.908	Cricetulus_griseus_crigri
ENSAPLG00000015811	SMG7	97	65.198	ENSCVAG00000011842	smg7	100	63.955	Cyprinodon_variegatus
ENSAPLG00000015811	SMG7	99	67.764	ENSDARG00000060767	smg7	99	67.246	Danio_rerio
ENSAPLG00000015811	SMG7	100	80.972	ENSDORG00000007331	Smg7	100	81.140	Dipodomys_ordii
ENSAPLG00000015811	SMG7	97	81.055	ENSETEG00000002654	SMG7	100	81.055	Echinops_telfairi
ENSAPLG00000015811	SMG7	100	81.978	ENSEASG00005006524	SMG7	100	82.146	Equus_asinus_asinus
ENSAPLG00000015811	SMG7	93	97.879	ENSECAG00000004313	SMG7	97	97.590	Equus_caballus
ENSAPLG00000015811	SMG7	95	81.514	ENSEEUG00000002024	SMG7	92	81.338	Erinaceus_europaeus
ENSAPLG00000015811	SMG7	92	71.763	ENSELUG00000010293	smg7	99	66.342	Esox_lucius
ENSAPLG00000015811	SMG7	99	86.320	ENSFCAG00000010900	SMG7	99	85.596	Felis_catus
ENSAPLG00000015811	SMG7	98	89.608	ENSFALG00000003047	SMG7	100	89.608	Ficedula_albicollis
ENSAPLG00000015811	SMG7	99	81.772	ENSFDAG00000012121	SMG7	99	81.687	Fukomys_damarensis
ENSAPLG00000015811	SMG7	99	63.777	ENSFHEG00000011073	smg7	99	64.378	Fundulus_heteroclitus
ENSAPLG00000015811	SMG7	74	73.764	ENSGMOG00000004916	smg7	74	73.764	Gadus_morhua
ENSAPLG00000015811	SMG7	99	97.797	ENSGALG00000004667	SMG7	99	97.797	Gallus_gallus
ENSAPLG00000015811	SMG7	99	63.832	ENSGAFG00000019000	smg7	99	62.723	Gambusia_affinis
ENSAPLG00000015811	SMG7	97	62.533	ENSGACG00000001634	smg7	99	63.061	Gasterosteus_aculeatus
ENSAPLG00000015811	SMG7	100	88.889	ENSGGOG00000002342	SMG7	100	89.064	Gorilla_gorilla
ENSAPLG00000015811	SMG7	99	64.073	ENSHBUG00000003726	smg7	93	71.500	Haplochromis_burtoni
ENSAPLG00000015811	SMG7	100	88.101	ENSHGLG00000009353	SMG7	100	88.276	Heterocephalus_glaber_female
ENSAPLG00000015811	SMG7	100	88.101	ENSHGLG00100009637	-	100	88.276	Heterocephalus_glaber_male
ENSAPLG00000015811	SMG7	100	74.602	ENSHGLG00100004878	-	100	74.769	Heterocephalus_glaber_male
ENSAPLG00000015811	SMG7	99	68.559	ENSIPUG00000016997	smg7	99	68.210	Ictalurus_punctatus
ENSAPLG00000015811	SMG7	100	85.914	ENSSTOG00000000401	SMG7	100	85.914	Ictidomys_tridecemlineatus
ENSAPLG00000015811	SMG7	100	80.453	ENSJJAG00000012351	Smg7	100	80.453	Jaculus_jaculus
ENSAPLG00000015811	SMG7	97	61.033	ENSKMAG00000004900	smg7	100	61.248	Kryptolebias_marmoratus
ENSAPLG00000015811	SMG7	52	61.526	ENSLBEG00000005220	-	75	61.526	Labrus_bergylta
ENSAPLG00000015811	SMG7	99	65.458	ENSLBEG00000002983	smg7	99	65.086	Labrus_bergylta
ENSAPLG00000015811	SMG7	99	74.805	ENSLACG00000000972	SMG7	99	75.000	Latimeria_chalumnae
ENSAPLG00000015811	SMG7	99	68.364	ENSLOCG00000002010	smg7	99	66.945	Lepisosteus_oculatus
ENSAPLG00000015811	SMG7	99	82.333	ENSLAFG00000008186	SMG7	99	82.502	Loxodonta_africana
ENSAPLG00000015811	SMG7	99	86.055	ENSMFAG00000031653	SMG7	100	85.404	Macaca_fascicularis
ENSAPLG00000015811	SMG7	99	88.938	ENSMMUG00000018458	SMG7	99	89.115	Macaca_mulatta
ENSAPLG00000015811	SMG7	100	88.889	ENSMNEG00000034798	SMG7	100	89.064	Macaca_nemestrina
ENSAPLG00000015811	SMG7	100	88.889	ENSMLEG00000037170	SMG7	100	89.064	Mandrillus_leucophaeus
ENSAPLG00000015811	SMG7	87	64.654	ENSMAMG00000018733	smg7	85	63.803	Mastacembelus_armatus
ENSAPLG00000015811	SMG7	99	65.150	ENSMZEG00005015247	smg7	93	71.000	Maylandia_zebra
ENSAPLG00000015811	SMG7	99	98.051	ENSMGAG00000001561	SMG7	99	98.051	Meleagris_gallopavo
ENSAPLG00000015811	SMG7	100	87.139	ENSMAUG00000019484	Smg7	100	87.314	Mesocricetus_auratus
ENSAPLG00000015811	SMG7	100	89.326	ENSMICG00000007145	SMG7	100	88.889	Microcebus_murinus
ENSAPLG00000015811	SMG7	100	86.964	ENSMOCG00000020748	Smg7	100	87.139	Microtus_ochrogaster
ENSAPLG00000015811	SMG7	99	63.747	ENSMMOG00000001524	smg7	99	64.223	Mola_mola
ENSAPLG00000015811	SMG7	92	89.704	ENSMODG00000007139	SMG7	99	89.619	Monodelphis_domestica
ENSAPLG00000015811	SMG7	99	64.580	ENSMALG00000000061	smg7	93	65.381	Monopterus_albus
ENSAPLG00000015811	SMG7	100	87.227	MGP_CAROLIEiJ_G0014704	Smg7	100	87.227	Mus_caroli
ENSAPLG00000015811	SMG7	100	87.139	ENSMUSG00000042772	Smg7	100	87.314	Mus_musculus
ENSAPLG00000015811	SMG7	100	86.964	MGP_PahariEiJ_G0027940	Smg7	100	87.139	Mus_pahari
ENSAPLG00000015811	SMG7	100	87.227	MGP_SPRETEiJ_G0015511	Smg7	100	87.402	Mus_spretus
ENSAPLG00000015811	SMG7	98	82.453	ENSMPUG00000011732	SMG7	97	82.538	Mustela_putorius_furo
ENSAPLG00000015811	SMG7	99	81.741	ENSMLUG00000015417	SMG7	99	81.910	Myotis_lucifugus
ENSAPLG00000015811	SMG7	100	88.189	ENSNGAG00000009836	Smg7	100	87.664	Nannospalax_galili
ENSAPLG00000015811	SMG7	98	60.817	ENSNBRG00000024343	smg7	99	60.839	Neolamprologus_brichardi
ENSAPLG00000015811	SMG7	100	88.976	ENSNLEG00000018018	SMG7	100	89.151	Nomascus_leucogenys
ENSAPLG00000015811	SMG7	69	89.837	ENSMEUG00000004681	SMG7	73	89.837	Notamacropus_eugenii
ENSAPLG00000015811	SMG7	96	73.537	ENSOPRG00000013942	SMG7	96	73.100	Ochotona_princeps
ENSAPLG00000015811	SMG7	100	88.189	ENSODEG00000010390	SMG7	100	88.189	Octodon_degus
ENSAPLG00000015811	SMG7	99	64.726	ENSONIG00000000277	smg7	99	64.414	Oreochromis_niloticus
ENSAPLG00000015811	SMG7	98	82.143	ENSOANG00000000994	SMG7	100	82.058	Ornithorhynchus_anatinus
ENSAPLG00000015811	SMG7	99	76.754	ENSOCUG00000005887	SMG7	92	77.008	Oryctolagus_cuniculus
ENSAPLG00000015811	SMG7	99	62.989	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSAPLG00000015811	SMG7	99	63.249	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSAPLG00000015811	SMG7	99	63.597	ENSORLG00015012289	smg7	99	62.672	Oryzias_latipes_hsok
ENSAPLG00000015811	SMG7	99	61.792	ENSOMEG00000002328	smg7	99	62.235	Oryzias_melastigma
ENSAPLG00000015811	SMG7	97	81.109	ENSOGAG00000003107	SMG7	94	80.936	Otolemur_garnettii
ENSAPLG00000015811	SMG7	98	84.978	ENSOARG00000001352	SMG7	100	85.067	Ovis_aries
ENSAPLG00000015811	SMG7	100	88.976	ENSPPAG00000031619	SMG7	100	89.151	Pan_paniscus
ENSAPLG00000015811	SMG7	100	89.064	ENSPPRG00000011222	SMG7	100	88.976	Panthera_pardus
ENSAPLG00000015811	SMG7	96	85.491	ENSPTIG00000007242	SMG7	100	85.404	Panthera_tigris_altaica
ENSAPLG00000015811	SMG7	100	88.976	ENSPTRG00000001764	SMG7	100	89.151	Pan_troglodytes
ENSAPLG00000015811	SMG7	100	88.889	ENSPANG00000004520	SMG7	100	89.064	Papio_anubis
ENSAPLG00000015811	SMG7	99	65.732	ENSPKIG00000007242	smg7	99	65.937	Paramormyrops_kingsleyae
ENSAPLG00000015811	SMG7	98	92.260	ENSPSIG00000012201	SMG7	100	92.260	Pelodiscus_sinensis
ENSAPLG00000015811	SMG7	71	42.193	ENSPMGG00000021833	smg7	98	43.214	Periophthalmus_magnuspinnatus
ENSAPLG00000015811	SMG7	99	85.084	ENSPEMG00000011315	Smg7	99	85.260	Peromyscus_maniculatus_bairdii
ENSAPLG00000015811	SMG7	100	89.239	ENSPCIG00000003786	SMG7	100	89.239	Phascolarctos_cinereus
ENSAPLG00000015811	SMG7	99	60.841	ENSPFOG00000019219	smg7	75	64.597	Poecilia_formosa
ENSAPLG00000015811	SMG7	99	63.433	ENSPLAG00000001446	smg7	99	63.730	Poecilia_latipinna
ENSAPLG00000015811	SMG7	96	62.677	ENSPMEG00000005218	smg7	99	62.986	Poecilia_mexicana
ENSAPLG00000015811	SMG7	85	63.987	ENSPREG00000019039	smg7	91	60.784	Poecilia_reticulata
ENSAPLG00000015811	SMG7	100	88.976	ENSPPYG00000000427	SMG7	100	89.151	Pongo_abelii
ENSAPLG00000015811	SMG7	95	72.007	ENSPCAG00000008360	SMG7	94	72.007	Procavia_capensis
ENSAPLG00000015811	SMG7	100	86.002	ENSPCOG00000011996	SMG7	100	85.564	Propithecus_coquereli
ENSAPLG00000015811	SMG7	91	76.606	ENSPVAG00000000851	SMG7	89	76.606	Pteropus_vampyrus
ENSAPLG00000015811	SMG7	99	65.318	ENSPNYG00000007643	smg7	93	71.859	Pundamilia_nyererei
ENSAPLG00000015811	SMG7	99	68.837	ENSPNAG00000011374	smg7	99	68.604	Pygocentrus_nattereri
ENSAPLG00000015811	SMG7	100	86.801	ENSRNOG00000027962	Smg7	100	86.801	Rattus_norvegicus
ENSAPLG00000015811	SMG7	100	88.801	ENSRBIG00000036316	SMG7	100	88.976	Rhinopithecus_bieti
ENSAPLG00000015811	SMG7	100	88.801	ENSRROG00000035719	SMG7	100	88.976	Rhinopithecus_roxellana
ENSAPLG00000015811	SMG7	100	85.639	ENSSBOG00000023454	SMG7	100	85.814	Saimiri_boliviensis_boliviensis
ENSAPLG00000015811	SMG7	99	89.780	ENSSHAG00000013147	SMG7	99	89.534	Sarcophilus_harrisii
ENSAPLG00000015811	SMG7	99	68.821	ENSSFOG00015017252	smg7	99	68.990	Scleropages_formosus
ENSAPLG00000015811	SMG7	99	64.477	ENSSMAG00000006067	smg7	99	65.090	Scophthalmus_maximus
ENSAPLG00000015811	SMG7	63	73.029	ENSSDUG00000017543	smg7	99	64.751	Seriola_dumerili
ENSAPLG00000015811	SMG7	99	92.145	ENSSPUG00000002064	SMG7	99	92.145	Sphenodon_punctatus
ENSAPLG00000015811	SMG7	98	65.991	ENSSPAG00000008733	smg7	98	65.789	Stegastes_partitus
ENSAPLG00000015811	SMG7	100	85.302	ENSSSCG00000015558	SMG7	100	85.477	Sus_scrofa
ENSAPLG00000015811	SMG7	99	97.085	ENSTGUG00000003928	SMG7	99	97.085	Taeniopygia_guttata
ENSAPLG00000015811	SMG7	99	58.891	ENSTNIG00000002802	smg7	99	58.713	Tetraodon_nigroviridis
ENSAPLG00000015811	SMG7	77	87.166	ENSTBEG00000003220	SMG7	71	87.166	Tupaia_belangeri
ENSAPLG00000015811	SMG7	96	81.326	ENSTTRG00000014778	SMG7	93	81.501	Tursiops_truncatus
ENSAPLG00000015811	SMG7	96	85.468	ENSUAMG00000017473	SMG7	100	85.559	Ursus_americanus
ENSAPLG00000015811	SMG7	96	85.468	ENSUMAG00000016389	SMG7	100	85.559	Ursus_maritimus
ENSAPLG00000015811	SMG7	100	85.564	ENSVVUG00000008976	SMG7	100	85.652	Vulpes_vulpes
ENSAPLG00000015811	SMG7	99	71.080	ENSXETG00000012528	smg7	99	70.993	Xenopus_tropicalis
ENSAPLG00000015811	SMG7	99	63.262	ENSXMAG00000007123	smg7	99	63.302	Xiphophorus_maculatus