EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSAPLG00000015935 (Gene tree)
Gene ID: -
Gene Symbol: SCRT1
Alias: -
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Plus strand
Length: 722 bases
Position: chrKB745147.1:1652-2373
Accession: 15950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000015816	zf-C2H2	PF00096.26	2.4e-15	1	3
ENSAPLP00000015816	zf-C2H2	PF00096.26	2.4e-15	2	3
ENSAPLP00000015816	zf-C2H2	PF00096.26	2.4e-15	3	3
ENSAPLP00000015816	zf-met	PF12874.7	5.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000016619	SCRT1-201	576	-	ENSAPLP00000015816	192 (aa)	-	U3J8I8

Gene Model

Click here to download ENSAPLG00000015935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000015935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000015935	SCRT1	66	49.315	ENSAPLG00000012660	-	63	49.315
ENSAPLG00000015935	SCRT1	90	37.333	ENSAPLG00000002963	ZBTB16	50	37.333
ENSAPLG00000015935	SCRT1	75	48.344	ENSAPLG00000014633	-	96	48.344
ENSAPLG00000015935	SCRT1	50	44.737	ENSAPLG00000004595	ZNF672	95	44.737
ENSAPLG00000015935	SCRT1	70	38.710	ENSAPLG00000013828	PRDM5	56	39.474
ENSAPLG00000015935	SCRT1	72	53.061	ENSAPLG00000014760	-	82	53.061
ENSAPLG00000015935	SCRT1	60	83.478	ENSAPLG00000011730	SCRT2	81	83.478
ENSAPLG00000015935	SCRT1	50	42.667	ENSAPLG00000003373	GFI1B	53	42.667
ENSAPLG00000015935	SCRT1	54	40.541	ENSAPLG00000015467	ZBTB48	67	40.541
ENSAPLG00000015935	SCRT1	53	31.683	ENSAPLG00000016199	OVOL2	56	31.683
ENSAPLG00000015935	SCRT1	50	45.333	ENSAPLG00000015700	GFI1	50	45.333