EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPLG00000016085 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 7563 bases
Position: chrKB742659.1:696701-704263
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000015970	AF-4	PF05110.13	1.7e-75	1	1
ENSAPLP00000015967	AF-4	PF05110.13	3.7e-72	1	2
ENSAPLP00000015967	AF-4	PF05110.13	3.7e-72	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000016779	-	957	-	ENSAPLP00000015970	319 (aa)	-	U3J8Z2
ENSAPLT00000016776	-	858	-	ENSAPLP00000015967	286 (aa)	-	U3J8Y9

Gene Model

Click here to download ENSAPLG00000016085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000016085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPLG00000016085	-	96	40.385	ENSAPLG00000003720	-	97	42.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000016085	-	95	72.857	ENSG00000144218	AFF3	95	81.915	Homo_sapiens
ENSAPLG00000016085	-	97	69.716	ENSAMEG00000015682	-	100	69.716	Ailuropoda_melanoleuca
ENSAPLG00000016085	-	95	37.994	ENSTSYG00000036097	-	67	67.368	Carlito_syrichta
ENSAPLG00000016085	-	93	68.613	ENSCPOG00000006346	AFF3	78	88.750	Cavia_porcellus
ENSAPLG00000016085	-	55	58.750	ENSCPOG00000001814	AFF4	65	58.750	Cavia_porcellus
ENSAPLG00000016085	-	93	72.628	ENSCLAG00000017100	AFF3	78	88.750	Chinchilla_lanigera
ENSAPLG00000016085	-	93	72.263	ENSCGRG00000003408	Aff3	78	87.500	Cricetulus_griseus_crigri
ENSAPLG00000016085	-	96	69.085	ENSDNOG00000047074	-	91	69.085	Dasypus_novemcinctus
ENSAPLG00000016085	-	93	71.168	ENSDORG00000007294	Aff3	78	90.000	Dipodomys_ordii
ENSAPLG00000016085	-	93	88.390	ENSFALG00000003872	-	99	88.390	Ficedula_albicollis
ENSAPLG00000016085	-	93	38.369	ENSGAGG00000024556	-	92	36.061	Gopherus_agassizii
ENSAPLG00000016085	-	85	76.923	ENSGAGG00000003871	-	76	76.190	Gopherus_agassizii
ENSAPLG00000016085	-	95	71.786	ENSSTOG00000012140	AFF3	73	91.250	Ictidomys_tridecemlineatus
ENSAPLG00000016085	-	95	34.568	ENSSTOG00000026695	AFF4	65	63.750	Ictidomys_tridecemlineatus
ENSAPLG00000016085	-	93	72.993	ENSJJAG00000013155	Aff3	78	88.750	Jaculus_jaculus
ENSAPLG00000016085	-	97	56.918	ENSLACG00000003828	-	95	55.660	Latimeria_chalumnae
ENSAPLG00000016085	-	95	40.663	ENSLACG00000008183	-	74	40.361	Latimeria_chalumnae
ENSAPLG00000016085	-	95	38.788	ENSLAFG00000018691	AFF2	51	64.045	Loxodonta_africana
ENSAPLG00000016085	-	50	79.167	ENSMMUG00000037520	-	91	81.553	Macaca_mulatta
ENSAPLG00000016085	-	93	89.057	ENSMGAG00000014794	-	94	90.189	Meleagris_gallopavo
ENSAPLG00000016085	-	62	72.093	ENSMGAG00000008263	-	70	72.093	Meleagris_gallopavo
ENSAPLG00000016085	-	95	72.569	ENSMODG00000001458	-	96	72.569	Monodelphis_domestica
ENSAPLG00000016085	-	95	72.143	ENSMUSG00000037138	Aff3	67	86.250	Mus_musculus
ENSAPLG00000016085	-	93	73.723	ENSMLUG00000015255	AFF3	56	73.358	Myotis_lucifugus
ENSAPLG00000016085	-	95	72.500	ENSNGAG00000002408	Aff3	67	90.000	Nannospalax_galili
ENSAPLG00000016085	-	93	59.191	ENSOANG00000004624	-	99	58.824	Ornithorhynchus_anatinus
ENSAPLG00000016085	-	96	68.571	ENSOARG00000013344	-	96	68.254	Ovis_aries
ENSAPLG00000016085	-	95	38.906	ENSPTIG00000018890	AFF2	75	37.994	Panthera_tigris_altaica
ENSAPLG00000016085	-	93	70.438	ENSPEMG00000014802	Aff3	78	86.250	Peromyscus_maniculatus_bairdii
ENSAPLG00000016085	-	96	38.824	ENSSHAG00000009556	AFF2	95	38.138	Sarcophilus_harrisii
ENSAPLG00000016085	-	89	72.054	ENSSHAG00000014244	-	100	72.391	Sarcophilus_harrisii
ENSAPLG00000016085	-	92	32.595	ENSSFOG00015000839	-	66	33.591	Scleropages_formosus
ENSAPLG00000016085	-	93	35.758	ENSSDUG00000013932	-	76	33.934	Seriola_dumerili
ENSAPLG00000016085	-	94	35.736	ENSSLDG00000022289	-	76	34.356	Seriola_lalandi_dorsalis
ENSAPLG00000016085	-	93	87.640	ENSTGUG00000010070	-	86	87.640	Taeniopygia_guttata
ENSAPLG00000016085	-	94	69.524	ENSUMAG00000007800	-	88	69.524	Ursus_maritimus