EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAPLG00000016318 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Anas_platyrhynchos
Status: putative
Strand: Minus strand
Length: 28826 bases
Position: chrKB742876.1:734190-763015
Accession: 101793205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPLP00000016232	MIF4G_like	PF09088.11	2e-36	1	1
ENSAPLP00000016232	MIF4G_like_2	PF09090.11	1.8e-82	1	1
ENSAPLP00000016232	MIF4G	PF02854.19	1.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPLT00000017045	NCBP1-201	2274	XM_005016937	ENSAPLP00000016232	757 (aa)	-	U3J9Q4

Gene Model

Click here to download ENSAPLG00000016318's gene model file

Pathways

Pathway ID	Pathway Name	Source
apla03013	RNA transport	KEGG
apla03015	mRNA surveillance pathway	KEGG
apla03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAPLG00000016318's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPLG00000016318	NCBP1	100	90.753	ENSG00000136937	NCBP1	95	90.621	Homo_sapiens
ENSAPLG00000016318	NCBP1	99	84.211	ENSAPOG00000008002	NCBP1	95	83.947	Acanthochromis_polyacanthus
ENSAPLG00000016318	NCBP1	100	90.753	ENSAMEG00000004763	NCBP1	95	90.621	Ailuropoda_melanoleuca
ENSAPLG00000016318	NCBP1	99	83.926	ENSACIG00000000274	NCBP1	95	83.926	Amphilophus_citrinellus
ENSAPLG00000016318	NCBP1	99	84.342	ENSAOCG00000021148	NCBP1	95	84.079	Amphiprion_ocellaris
ENSAPLG00000016318	NCBP1	99	84.342	ENSAPEG00000001701	NCBP1	95	84.079	Amphiprion_percula
ENSAPLG00000016318	NCBP1	99	83.816	ENSATEG00000006929	NCBP1	95	83.684	Anabas_testudineus
ENSAPLG00000016318	NCBP1	99	90.476	ENSACAG00000004409	NCBP1	83	90.482	Anolis_carolinensis
ENSAPLG00000016318	NCBP1	99	91.102	ENSANAG00000025744	NCBP1	99	90.110	Aotus_nancymaae
ENSAPLG00000016318	NCBP1	99	83.684	ENSACLG00000014812	NCBP1	99	82.873	Astatotilapia_calliptera
ENSAPLG00000016318	NCBP1	99	82.940	ENSAMXG00000016364	NCBP1	95	82.677	Astyanax_mexicanus
ENSAPLG00000016318	NCBP1	100	90.489	ENSBTAG00000009732	NCBP1	95	90.357	Bos_taurus
ENSAPLG00000016318	NCBP1	99	34.278	WBGene00018156	ncbp-1	95	33.892	Caenorhabditis_elegans
ENSAPLG00000016318	NCBP1	100	90.885	ENSCJAG00000010840	NCBP1	99	90.247	Callithrix_jacchus
ENSAPLG00000016318	NCBP1	100	90.753	ENSCAFG00000002445	NCBP1	95	90.621	Canis_familiaris
ENSAPLG00000016318	NCBP1	100	90.753	ENSCAFG00020017997	NCBP1	100	90.435	Canis_lupus_dingo
ENSAPLG00000016318	NCBP1	100	90.225	ENSCHIG00000020139	NCBP1	95	90.092	Capra_hircus
ENSAPLG00000016318	NCBP1	50	92.553	ENSTSYG00000011914	NCBP1	90	92.517	Carlito_syrichta
ENSAPLG00000016318	NCBP1	85	80.989	ENSCAPG00000014252	NCBP1	90	80.989	Cavia_aperea
ENSAPLG00000016318	NCBP1	100	90.621	ENSCPOG00000012573	NCBP1	98	90.489	Cavia_porcellus
ENSAPLG00000016318	NCBP1	100	90.753	ENSCCAG00000032297	NCBP1	95	90.621	Cebus_capucinus
ENSAPLG00000016318	NCBP1	100	90.753	ENSCATG00000010052	NCBP1	99	90.691	Cercocebus_atys
ENSAPLG00000016318	NCBP1	100	90.753	ENSCLAG00000014339	NCBP1	95	90.621	Chinchilla_lanigera
ENSAPLG00000016318	NCBP1	100	90.753	ENSCSAG00000010929	NCBP1	95	90.621	Chlorocebus_sabaeus
ENSAPLG00000016318	NCBP1	89	88.785	ENSCHOG00000010332	NCBP1	85	88.785	Choloepus_hoffmanni
ENSAPLG00000016318	NCBP1	96	94.126	ENSCPBG00000024344	NCBP1	99	94.536	Chrysemys_picta_bellii
ENSAPLG00000016318	NCBP1	98	52.863	ENSCING00000008990	-	94	53.150	Ciona_intestinalis
ENSAPLG00000016318	NCBP1	98	51.783	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSAPLG00000016318	NCBP1	100	90.753	ENSCANG00000036913	NCBP1	99	90.110	Colobus_angolensis_palliatus
ENSAPLG00000016318	NCBP1	100	90.225	ENSCGRG00001015771	Ncbp1	95	90.092	Cricetulus_griseus_chok1gshd
ENSAPLG00000016318	NCBP1	100	90.225	ENSCGRG00000010311	Ncbp1	96	90.092	Cricetulus_griseus_crigri
ENSAPLG00000016318	NCBP1	99	83.553	ENSCSEG00000012377	NCBP1	99	82.964	Cynoglossus_semilaevis
ENSAPLG00000016318	NCBP1	99	81.472	ENSCVAG00000008795	NCBP1	95	81.997	Cyprinodon_variegatus
ENSAPLG00000016318	NCBP1	100	90.092	ENSDNOG00000006885	NCBP1	100	89.710	Dasypus_novemcinctus
ENSAPLG00000016318	NCBP1	97	88.259	ENSDORG00000013652	Ncbp1	92	90.028	Dipodomys_ordii
ENSAPLG00000016318	NCBP1	83	33.076	FBgn0038887	CG7907	82	32.972	Drosophila_melanogaster
ENSAPLG00000016318	NCBP1	100	56.437	FBgn0022942	Cbp80	95	57.012	Drosophila_melanogaster
ENSAPLG00000016318	NCBP1	89	85.281	ENSETEG00000009705	NCBP1	84	85.065	Echinops_telfairi
ENSAPLG00000016318	NCBP1	100	73.781	ENSEBUG00000008386	NCBP1	95	73.518	Eptatretus_burgeri
ENSAPLG00000016318	NCBP1	100	90.225	ENSEASG00005022795	NCBP1	95	90.092	Equus_asinus_asinus
ENSAPLG00000016318	NCBP1	100	90.357	ENSECAG00000013847	NCBP1	95	90.225	Equus_caballus
ENSAPLG00000016318	NCBP1	95	84.583	ENSEEUG00000015973	NCBP1	94	84.444	Erinaceus_europaeus
ENSAPLG00000016318	NCBP1	99	81.472	ENSELUG00000022519	NCBP1	98	81.997	Esox_lucius
ENSAPLG00000016318	NCBP1	100	90.621	ENSFCAG00000001206	NCBP1	95	90.489	Felis_catus
ENSAPLG00000016318	NCBP1	100	98.423	ENSFALG00000001193	NCBP1	96	98.423	Ficedula_albicollis
ENSAPLG00000016318	NCBP1	100	90.621	ENSFDAG00000010864	NCBP1	96	90.489	Fukomys_damarensis
ENSAPLG00000016318	NCBP1	99	82.654	ENSFHEG00000000655	NCBP1	95	82.392	Fundulus_heteroclitus
ENSAPLG00000016318	NCBP1	99	81.603	ENSGMOG00000008653	NCBP1	94	81.078	Gadus_morhua
ENSAPLG00000016318	NCBP1	100	98.547	ENSGALG00000002087	NCBP1	95	98.547	Gallus_gallus
ENSAPLG00000016318	NCBP1	99	83.049	ENSGAFG00000017787	NCBP1	95	82.786	Gambusia_affinis
ENSAPLG00000016318	NCBP1	99	81.627	ENSGACG00000016772	NCBP1	93	81.496	Gasterosteus_aculeatus
ENSAPLG00000016318	NCBP1	100	94.350	ENSGAGG00000019483	NCBP1	99	94.126	Gopherus_agassizii
ENSAPLG00000016318	NCBP1	100	90.753	ENSGGOG00000001376	NCBP1	99	90.110	Gorilla_gorilla
ENSAPLG00000016318	NCBP1	99	83.684	ENSHBUG00000020843	NCBP1	95	83.553	Haplochromis_burtoni
ENSAPLG00000016318	NCBP1	100	90.621	ENSHGLG00000001882	NCBP1	95	90.489	Heterocephalus_glaber_female
ENSAPLG00000016318	NCBP1	99	79.603	ENSHGLG00000018112	-	94	79.470	Heterocephalus_glaber_female
ENSAPLG00000016318	NCBP1	100	90.621	ENSHGLG00100013014	NCBP1	95	90.489	Heterocephalus_glaber_male
ENSAPLG00000016318	NCBP1	99	79.338	ENSHGLG00100017373	-	94	79.205	Heterocephalus_glaber_male
ENSAPLG00000016318	NCBP1	83	73.144	ENSHCOG00000000204	NCBP1	92	72.986	Hippocampus_comes
ENSAPLG00000016318	NCBP1	99	82.523	ENSIPUG00000007275	ncbp1	95	82.260	Ictalurus_punctatus
ENSAPLG00000016318	NCBP1	100	90.753	ENSSTOG00000002695	NCBP1	95	90.621	Ictidomys_tridecemlineatus
ENSAPLG00000016318	NCBP1	99	82.895	ENSKMAG00000003594	NCBP1	95	82.763	Kryptolebias_marmoratus
ENSAPLG00000016318	NCBP1	99	81.582	ENSLBEG00000011661	NCBP1	95	81.453	Labrus_bergylta
ENSAPLG00000016318	NCBP1	100	80.990	ENSLACG00000013955	NCBP1	95	81.120	Latimeria_chalumnae
ENSAPLG00000016318	NCBP1	99	72.266	ENSLOCG00000009579	NCBP1	95	72.135	Lepisosteus_oculatus
ENSAPLG00000016318	NCBP1	100	90.357	ENSLAFG00000005999	NCBP1	95	90.225	Loxodonta_africana
ENSAPLG00000016318	NCBP1	100	90.753	ENSMFAG00000030994	NCBP1	99	90.691	Macaca_fascicularis
ENSAPLG00000016318	NCBP1	100	90.753	ENSMMUG00000012281	NCBP1	99	90.691	Macaca_mulatta
ENSAPLG00000016318	NCBP1	100	90.753	ENSMNEG00000042790	NCBP1	95	90.621	Macaca_nemestrina
ENSAPLG00000016318	NCBP1	100	90.753	ENSMLEG00000030374	NCBP1	99	90.110	Mandrillus_leucophaeus
ENSAPLG00000016318	NCBP1	99	84.079	ENSMAMG00000014806	NCBP1	95	83.816	Mastacembelus_armatus
ENSAPLG00000016318	NCBP1	99	82.804	ENSMZEG00005009290	-	97	82.827	Maylandia_zebra
ENSAPLG00000016318	NCBP1	99	83.684	ENSMZEG00005003469	NCBP1	95	83.553	Maylandia_zebra
ENSAPLG00000016318	NCBP1	100	90.225	ENSMAUG00000020583	Ncbp1	95	90.092	Mesocricetus_auratus
ENSAPLG00000016318	NCBP1	100	90.225	ENSMICG00000012682	NCBP1	95	90.092	Microcebus_murinus
ENSAPLG00000016318	NCBP1	100	89.828	ENSMOCG00000015818	Ncbp1	95	89.696	Microtus_ochrogaster
ENSAPLG00000016318	NCBP1	95	81.717	ENSMMOG00000002610	NCBP1	99	81.743	Mola_mola
ENSAPLG00000016318	NCBP1	100	89.696	ENSMODG00000003202	NCBP1	94	89.564	Monodelphis_domestica
ENSAPLG00000016318	NCBP1	99	82.763	ENSMALG00000003547	NCBP1	95	82.632	Monopterus_albus
ENSAPLG00000016318	NCBP1	100	90.092	MGP_CAROLIEiJ_G0025982	Ncbp1	95	89.960	Mus_caroli
ENSAPLG00000016318	NCBP1	100	90.092	ENSMUSG00000028330	Ncbp1	95	89.960	Mus_musculus
ENSAPLG00000016318	NCBP1	100	90.357	MGP_PahariEiJ_G0028318	Ncbp1	95	90.225	Mus_pahari
ENSAPLG00000016318	NCBP1	100	90.092	MGP_SPRETEiJ_G0026945	Ncbp1	95	89.960	Mus_spretus
ENSAPLG00000016318	NCBP1	100	90.621	ENSMPUG00000006399	NCBP1	95	90.489	Mustela_putorius_furo
ENSAPLG00000016318	NCBP1	100	89.696	ENSMLUG00000015201	NCBP1	96	89.564	Myotis_lucifugus
ENSAPLG00000016318	NCBP1	100	90.092	ENSNGAG00000014101	Ncbp1	95	89.960	Nannospalax_galili
ENSAPLG00000016318	NCBP1	74	87.368	ENSNBRG00000014674	NCBP1	89	87.368	Neolamprologus_brichardi
ENSAPLG00000016318	NCBP1	100	90.753	ENSNLEG00000016909	NCBP1	99	90.691	Nomascus_leucogenys
ENSAPLG00000016318	NCBP1	90	87.611	ENSMEUG00000010672	NCBP1	87	86.283	Notamacropus_eugenii
ENSAPLG00000016318	NCBP1	83	91.176	ENSOPRG00000002144	-	83	91.176	Ochotona_princeps
ENSAPLG00000016318	NCBP1	100	90.621	ENSODEG00000003232	NCBP1	96	90.489	Octodon_degus
ENSAPLG00000016318	NCBP1	99	83.684	ENSONIG00000001502	NCBP1	95	83.553	Oreochromis_niloticus
ENSAPLG00000016318	NCBP1	79	91.500	ENSOANG00000001918	NCBP1	95	91.500	Ornithorhynchus_anatinus
ENSAPLG00000016318	NCBP1	98	90.541	ENSOCUG00000013853	NCBP1	92	90.405	Oryctolagus_cuniculus
ENSAPLG00000016318	NCBP1	99	81.021	ENSORLG00000011008	NCBP1	98	81.502	Oryzias_latipes
ENSAPLG00000016318	NCBP1	99	82.199	ENSORLG00020017455	NCBP1	95	81.675	Oryzias_latipes_hni
ENSAPLG00000016318	NCBP1	99	81.152	ENSORLG00015012127	NCBP1	95	81.675	Oryzias_latipes_hsok
ENSAPLG00000016318	NCBP1	99	82.461	ENSOMEG00000020698	NCBP1	95	82.068	Oryzias_melastigma
ENSAPLG00000016318	NCBP1	100	90.885	ENSOGAG00000013888	NCBP1	95	90.753	Otolemur_garnettii
ENSAPLG00000016318	NCBP1	100	90.225	ENSOARG00000011233	NCBP1	95	90.092	Ovis_aries
ENSAPLG00000016318	NCBP1	100	90.753	ENSPPAG00000026462	NCBP1	99	90.110	Pan_paniscus
ENSAPLG00000016318	NCBP1	100	90.753	ENSPPRG00000022574	NCBP1	95	90.621	Panthera_pardus
ENSAPLG00000016318	NCBP1	100	90.753	ENSPTIG00000018507	NCBP1	95	90.621	Panthera_tigris_altaica
ENSAPLG00000016318	NCBP1	100	90.753	ENSPTRG00000021167	NCBP1	95	90.621	Pan_troglodytes
ENSAPLG00000016318	NCBP1	100	90.753	ENSPANG00000025591	NCBP1	99	90.691	Papio_anubis
ENSAPLG00000016318	NCBP1	100	80.946	ENSPKIG00000015861	NCBP1	99	81.340	Paramormyrops_kingsleyae
ENSAPLG00000016318	NCBP1	68	94.369	ENSPSIG00000009558	NCBP1	100	94.951	Pelodiscus_sinensis
ENSAPLG00000016318	NCBP1	99	79.079	ENSPMGG00000020476	NCBP1	95	79.079	Periophthalmus_magnuspinnatus
ENSAPLG00000016318	NCBP1	100	89.828	ENSPEMG00000020105	Ncbp1	95	89.696	Peromyscus_maniculatus_bairdii
ENSAPLG00000016318	NCBP1	100	66.797	ENSPMAG00000005533	NCBP1	95	66.536	Petromyzon_marinus
ENSAPLG00000016318	NCBP1	100	89.432	ENSPCIG00000015800	NCBP1	94	89.300	Phascolarctos_cinereus
ENSAPLG00000016318	NCBP1	99	82.723	ENSPFOG00000004158	NCBP1	95	82.199	Poecilia_formosa
ENSAPLG00000016318	NCBP1	99	83.049	ENSPLAG00000020002	NCBP1	95	82.786	Poecilia_latipinna
ENSAPLG00000016318	NCBP1	99	83.049	ENSPMEG00000019821	NCBP1	95	82.786	Poecilia_mexicana
ENSAPLG00000016318	NCBP1	99	83.071	ENSPREG00000006035	NCBP1	95	82.415	Poecilia_reticulata
ENSAPLG00000016318	NCBP1	100	90.753	ENSPPYG00000019426	NCBP1	95	90.621	Pongo_abelii
ENSAPLG00000016318	NCBP1	89	92.491	ENSPCAG00000009943	NCBP1	85	92.491	Procavia_capensis
ENSAPLG00000016318	NCBP1	86	90.121	ENSPCOG00000020024	NCBP1	98	89.919	Propithecus_coquereli
ENSAPLG00000016318	NCBP1	100	90.225	ENSPVAG00000005924	NCBP1	95	90.092	Pteropus_vampyrus
ENSAPLG00000016318	NCBP1	96	82.849	ENSPNYG00000002140	NCBP1	99	82.873	Pundamilia_nyererei
ENSAPLG00000016318	NCBP1	99	83.596	ENSPNAG00000027753	NCBP1	98	83.425	Pygocentrus_nattereri
ENSAPLG00000016318	NCBP1	100	90.225	ENSRNOG00000023605	Ncbp1	95	90.092	Rattus_norvegicus
ENSAPLG00000016318	NCBP1	100	90.753	ENSRBIG00000043175	NCBP1	99	90.691	Rhinopithecus_bieti
ENSAPLG00000016318	NCBP1	100	90.753	ENSRROG00000029767	NCBP1	99	90.110	Rhinopithecus_roxellana
ENSAPLG00000016318	NCBP1	100	90.753	ENSSBOG00000019378	NCBP1	99	87.225	Saimiri_boliviensis_boliviensis
ENSAPLG00000016318	NCBP1	69	88.168	ENSSHAG00000015882	NCBP1	68	87.308	Sarcophilus_harrisii
ENSAPLG00000016318	NCBP1	100	81.902	ENSSFOG00015001872	NCBP1	96	81.770	Scleropages_formosus
ENSAPLG00000016318	NCBP1	99	82.368	ENSSMAG00000007463	NCBP1	95	82.105	Scophthalmus_maximus
ENSAPLG00000016318	NCBP1	99	83.333	ENSSDUG00000007019	NCBP1	95	83.333	Seriola_dumerili
ENSAPLG00000016318	NCBP1	99	83.421	ENSSLDG00000021924	NCBP1	95	83.289	Seriola_lalandi_dorsalis
ENSAPLG00000016318	NCBP1	86	81.818	ENSSARG00000007274	NCBP1	83	81.602	Sorex_araneus
ENSAPLG00000016318	NCBP1	100	85.469	ENSSPUG00000008609	NCBP1	95	85.337	Sphenodon_punctatus
ENSAPLG00000016318	NCBP1	99	84.079	ENSSPAG00000012550	NCBP1	95	83.947	Stegastes_partitus
ENSAPLG00000016318	NCBP1	100	90.489	ENSSSCG00000005366	NCBP1	95	90.357	Sus_scrofa
ENSAPLG00000016318	NCBP1	100	91.459	ENSTGUG00000001472	NCBP1	95	91.853	Taeniopygia_guttata
ENSAPLG00000016318	NCBP1	99	82.895	ENSTRUG00000005287	NCBP1	95	82.763	Takifugu_rubripes
ENSAPLG00000016318	NCBP1	100	87.186	ENSTBEG00000004035	NCBP1	95	87.054	Tupaia_belangeri
ENSAPLG00000016318	NCBP1	87	90.303	ENSTTRG00000000507	NCBP1	83	90.184	Tursiops_truncatus
ENSAPLG00000016318	NCBP1	100	90.621	ENSUAMG00000005471	NCBP1	95	90.489	Ursus_americanus
ENSAPLG00000016318	NCBP1	100	88.507	ENSUMAG00000011865	NCBP1	100	90.435	Ursus_maritimus
ENSAPLG00000016318	NCBP1	95	90.720	ENSVPAG00000010537	NCBP1	91	90.582	Vicugna_pacos
ENSAPLG00000016318	NCBP1	100	90.753	ENSVVUG00000019725	NCBP1	95	90.621	Vulpes_vulpes
ENSAPLG00000016318	NCBP1	100	82.034	ENSXETG00000010179	ncbp1	95	82.034	Xenopus_tropicalis
ENSAPLG00000016318	NCBP1	99	82.917	ENSXMAG00000018253	NCBP1	95	82.654	Xiphophorus_maculatus