EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000000288 (Gene tree)
Gene ID: 110959214
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 114343 bases
Position: chrMVNR01000673.1:298277-412619
Accession: 110959214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000026297	cwf21	PF08312.12	1.9e-15	1	1
ENSAPOP00000026297	SRRM_C	PF15230.6	1.7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000004084	SRRM3-201	4819	XM_022205998	ENSAPOP00000026297	646 (aa)	XP_022061690	UPI000B907118

Gene Model

Click here to download ENSAPOG00000000288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000000288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000000288	SRRM3	87	82.478	ENSACLG00000005269	SRRM3	87	82.478	Astatotilapia_calliptera
ENSAPOG00000000288	SRRM3	87	55.479	ENSAMXG00000016051	-	87	56.507	Astyanax_mexicanus
ENSAPOG00000000288	SRRM3	87	45.738	ENSCPBG00000027784	SRRM3	90	46.003	Chrysemys_picta_bellii
ENSAPOG00000000288	SRRM3	88	74.869	ENSCSEG00000010978	-	80	74.869	Cynoglossus_semilaevis
ENSAPOG00000000288	SRRM3	87	81.239	ENSGAFG00000014777	SRRM3	87	81.239	Gambusia_affinis
ENSAPOG00000000288	SRRM3	87	43.974	ENSGAGG00000021058	SRRM3	96	46.382	Gopherus_agassizii
ENSAPOG00000000288	SRRM3	87	83.039	ENSHBUG00000005061	SRRM3	87	83.009	Haplochromis_burtoni
ENSAPOG00000000288	SRRM3	87	53.688	ENSIPUG00000012467	srrm3	87	56.529	Ictalurus_punctatus
ENSAPOG00000000288	SRRM3	53	50.862	ENSSTOG00000014181	SRRM3	78	61.983	Ictidomys_tridecemlineatus
ENSAPOG00000000288	SRRM3	88	80.977	ENSKMAG00000013495	SRRM3	87	80.810	Kryptolebias_marmoratus
ENSAPOG00000000288	SRRM3	52	58.873	ENSLOCG00000002879	SRRM3	99	60.000	Lepisosteus_oculatus
ENSAPOG00000000288	SRRM3	89	83.793	ENSMALG00000000844	-	89	84.099	Monopterus_albus
ENSAPOG00000000288	SRRM3	88	63.158	ENSONIG00000012732	-	98	63.036	Oreochromis_niloticus
ENSAPOG00000000288	SRRM3	88	79.649	ENSORLG00000026242	-	89	79.505	Oryzias_latipes
ENSAPOG00000000288	SRRM3	88	80.175	ENSORLG00020016592	-	89	80.035	Oryzias_latipes_hni
ENSAPOG00000000288	SRRM3	88	79.649	ENSORLG00015022712	SRRM3	89	79.505	Oryzias_latipes_hsok
ENSAPOG00000000288	SRRM3	88	78.070	ENSOMEG00000010768	-	88	77.915	Oryzias_melastigma
ENSAPOG00000000288	SRRM3	87	53.390	ENSPKIG00000017233	SRRM3	92	53.547	Paramormyrops_kingsleyae
ENSAPOG00000000288	SRRM3	88	59.197	ENSPFOG00000009007	SRRM3	89	60.406	Poecilia_formosa
ENSAPOG00000000288	SRRM3	87	80.177	ENSPMEG00000011981	-	87	80.177	Poecilia_mexicana
ENSAPOG00000000288	SRRM3	87	81.416	ENSPREG00000008138	-	87	81.416	Poecilia_reticulata
ENSAPOG00000000288	SRRM3	87	56.463	ENSPNAG00000009621	SRRM3	87	58.092	Pygocentrus_nattereri
ENSAPOG00000000288	SRRM3	61	56.573	ENSSFOG00015001696	SRRM3	99	56.573	Scleropages_formosus
ENSAPOG00000000288	SRRM3	87	86.243	ENSSMAG00000000476	SRRM3	88	86.243	Scophthalmus_maximus
ENSAPOG00000000288	SRRM3	88	85.862	ENSSLDG00000020070	SRRM3	87	86.724	Seriola_lalandi_dorsalis
ENSAPOG00000000288	SRRM3	87	80.531	ENSXMAG00000005663	-	87	80.531	Xiphophorus_maculatus