EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000000397 (Gene tree)
Gene ID: 110972750
Gene Symbol: shq1
Alias: zgc:158255
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 42036 bases
Position: chrMVNR01000006.1:555495-597530
Accession: 110972750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000011768	SHQ1	PF04925.15	2.6e-69	1	1
ENSAPOP00000028856	SHQ1	PF04925.15	2.6e-69	1	1
ENSAPOP00000028863	SHQ1	PF04925.15	2.6e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000019423	-	2859	-	ENSAPOP00000011768	610 (aa)	-	UPI000B902CC3
ENSAPOT00000031742	-	2992	XM_022223219	ENSAPOP00000028856	610 (aa)	XP_022078911	UPI000B902CC3
ENSAPOT00000019438	-	2859	XM_022223147	ENSAPOP00000028863	610 (aa)	XP_022078839	UPI000B902CC3

Gene Model

Click here to download ENSAPOG00000000397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000000397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000000397	shq1	92	53.287	ENSG00000144736	SHQ1	96	70.833	Homo_sapiens
ENSAPOG00000000397	shq1	91	53.497	ENSAMEG00000015140	SHQ1	76	61.327	Ailuropoda_melanoleuca
ENSAPOG00000000397	shq1	100	80.033	ENSACIG00000021249	shq1	100	79.869	Amphilophus_citrinellus
ENSAPOG00000000397	shq1	100	95.603	ENSAOCG00000023311	shq1	100	95.603	Amphiprion_ocellaris
ENSAPOG00000000397	shq1	100	94.290	ENSAPEG00000021686	shq1	100	94.290	Amphiprion_percula
ENSAPOG00000000397	shq1	99	76.364	ENSATEG00000008475	shq1	98	76.364	Anabas_testudineus
ENSAPOG00000000397	shq1	72	58.889	ENSAPLG00000013926	SHQ1	88	57.556	Anas_platyrhynchos
ENSAPOG00000000397	shq1	72	61.298	ENSACAG00000014809	SHQ1	66	61.521	Anolis_carolinensis
ENSAPOG00000000397	shq1	92	38.821	ENSANAG00000030500	-	74	43.088	Aotus_nancymaae
ENSAPOG00000000397	shq1	93	53.022	ENSANAG00000029241	SHQ1	75	61.327	Aotus_nancymaae
ENSAPOG00000000397	shq1	100	77.414	ENSACLG00000023077	shq1	100	74.375	Astatotilapia_calliptera
ENSAPOG00000000397	shq1	70	65.808	ENSAMXG00000043822	shq1	75	65.893	Astyanax_mexicanus
ENSAPOG00000000397	shq1	90	53.203	ENSBTAG00000005436	SHQ1	76	61.521	Bos_taurus
ENSAPOG00000000397	shq1	69	31.336	WBGene00021655	Y48A5A.1	92	31.490	Caenorhabditis_elegans
ENSAPOG00000000397	shq1	93	51.973	ENSCJAG00000015131	SHQ1	75	60.870	Callithrix_jacchus
ENSAPOG00000000397	shq1	92	53.299	ENSCAFG00000006434	SHQ1	75	62.243	Canis_familiaris
ENSAPOG00000000397	shq1	92	53.472	ENSCAFG00020016743	SHQ1	75	62.471	Canis_lupus_dingo
ENSAPOG00000000397	shq1	92	53.993	ENSCHIG00000012271	SHQ1	68	62.700	Capra_hircus
ENSAPOG00000000397	shq1	84	48.948	ENSCAPG00000009343	SHQ1	95	60.897	Cavia_aperea
ENSAPOG00000000397	shq1	92	53.195	ENSCPOG00000011443	SHQ1	98	51.986	Cavia_porcellus
ENSAPOG00000000397	shq1	91	40.830	ENSCCAG00000036087	-	75	45.977	Cebus_capucinus
ENSAPOG00000000397	shq1	70	52.632	ENSCCAG00000027080	SHQ1	73	52.632	Cebus_capucinus
ENSAPOG00000000397	shq1	70	62.700	ENSCATG00000041238	SHQ1	75	62.700	Cercocebus_atys
ENSAPOG00000000397	shq1	94	51.661	ENSCLAG00000004206	SHQ1	75	61.785	Chinchilla_lanigera
ENSAPOG00000000397	shq1	52	60.550	ENSCSAG00000011514	SHQ1	70	60.632	Chlorocebus_sabaeus
ENSAPOG00000000397	shq1	55	51.156	ENSCHOG00000003273	-	84	68.333	Choloepus_hoffmanni
ENSAPOG00000000397	shq1	99	50.242	ENSCPBG00000006441	SHQ1	71	61.136	Chrysemys_picta_bellii
ENSAPOG00000000397	shq1	64	41.895	ENSCING00000008013	-	95	42.396	Ciona_intestinalis
ENSAPOG00000000397	shq1	66	40.244	ENSCSAVG00000002332	-	98	40.741	Ciona_savignyi
ENSAPOG00000000397	shq1	91	53.229	ENSCANG00000039295	SHQ1	76	62.014	Colobus_angolensis_palliatus
ENSAPOG00000000397	shq1	92	51.646	ENSCGRG00001012583	Shq1	77	60.183	Cricetulus_griseus_chok1gshd
ENSAPOG00000000397	shq1	92	51.646	ENSCGRG00000009849	Shq1	77	60.183	Cricetulus_griseus_crigri
ENSAPOG00000000397	shq1	99	71.452	ENSCSEG00000007829	shq1	99	72.419	Cynoglossus_semilaevis
ENSAPOG00000000397	shq1	99	72.277	ENSCVAG00000020049	shq1	99	71.947	Cyprinodon_variegatus
ENSAPOG00000000397	shq1	94	53.873	ENSDNOG00000033937	SHQ1	75	62.471	Dasypus_novemcinctus
ENSAPOG00000000397	shq1	67	54.327	ENSETEG00000005766	SHQ1	76	54.691	Echinops_telfairi
ENSAPOG00000000397	shq1	62	47.382	ENSEBUG00000005445	shq1	79	49.288	Eptatretus_burgeri
ENSAPOG00000000397	shq1	70	62.243	ENSEASG00005002237	SHQ1	75	62.243	Equus_asinus_asinus
ENSAPOG00000000397	shq1	70	62.243	ENSECAG00000015673	SHQ1	74	62.243	Equus_caballus
ENSAPOG00000000397	shq1	70	62.014	ENSEEUG00000010568	SHQ1	76	62.014	Erinaceus_europaeus
ENSAPOG00000000397	shq1	98	64.120	ENSELUG00000003476	shq1	99	64.379	Esox_lucius
ENSAPOG00000000397	shq1	91	53.752	ENSFCAG00000012781	SHQ1	76	61.098	Felis_catus
ENSAPOG00000000397	shq1	99	51.752	ENSFALG00000013428	SHQ1	72	62.054	Ficedula_albicollis
ENSAPOG00000000397	shq1	67	61.298	ENSFDAG00000005595	SHQ1	68	60.455	Fukomys_damarensis
ENSAPOG00000000397	shq1	98	71.667	ENSFHEG00000017552	shq1	100	71.333	Fundulus_heteroclitus
ENSAPOG00000000397	shq1	64	76.093	ENSGMOG00000007350	shq1	100	75.321	Gadus_morhua
ENSAPOG00000000397	shq1	99	51.108	ENSGALG00000007798	SHQ1	100	49.920	Gallus_gallus
ENSAPOG00000000397	shq1	64	81.234	ENSGACG00000011797	shq1	100	80.977	Gasterosteus_aculeatus
ENSAPOG00000000397	shq1	92	52.850	ENSGGOG00000034818	SHQ1	75	61.556	Gorilla_gorilla
ENSAPOG00000000397	shq1	100	77.578	ENSHBUG00000010857	shq1	100	77.905	Haplochromis_burtoni
ENSAPOG00000000397	shq1	96	51.797	ENSHGLG00000003637	SHQ1	92	50.654	Heterocephalus_glaber_female
ENSAPOG00000000397	shq1	96	51.634	ENSHGLG00100011957	SHQ1	92	50.490	Heterocephalus_glaber_male
ENSAPOG00000000397	shq1	99	67.662	ENSHCOG00000010799	shq1	99	65.340	Hippocampus_comes
ENSAPOG00000000397	shq1	70	66.512	ENSIPUG00000001247	shq1	74	66.512	Ictalurus_punctatus
ENSAPOG00000000397	shq1	92	53.076	ENSSTOG00000010043	SHQ1	79	59.954	Ictidomys_tridecemlineatus
ENSAPOG00000000397	shq1	70	61.785	ENSJJAG00000017611	Shq1	71	68.750	Jaculus_jaculus
ENSAPOG00000000397	shq1	100	74.304	ENSKMAG00000004457	shq1	100	72.995	Kryptolebias_marmoratus
ENSAPOG00000000397	shq1	92	55.026	ENSLACG00000014243	SHQ1	66	62.812	Latimeria_chalumnae
ENSAPOG00000000397	shq1	99	56.556	ENSLOCG00000009970	shq1	99	55.766	Lepisosteus_oculatus
ENSAPOG00000000397	shq1	70	43.649	ENSMFAG00000037396	-	73	42.459	Macaca_fascicularis
ENSAPOG00000000397	shq1	91	53.927	ENSMFAG00000039148	SHQ1	75	62.700	Macaca_fascicularis
ENSAPOG00000000397	shq1	70	43.649	ENSMMUG00000021761	-	73	42.459	Macaca_mulatta
ENSAPOG00000000397	shq1	62	61.697	ENSMMUG00000009571	SHQ1	70	61.697	Macaca_mulatta
ENSAPOG00000000397	shq1	91	53.927	ENSMNEG00000032667	SHQ1	75	62.700	Macaca_nemestrina
ENSAPOG00000000397	shq1	67	62.260	ENSMLEG00000038493	SHQ1	75	62.243	Mandrillus_leucophaeus
ENSAPOG00000000397	shq1	99	78.387	ENSMAMG00000023432	shq1	96	78.548	Mastacembelus_armatus
ENSAPOG00000000397	shq1	100	77.414	ENSMZEG00005008649	shq1	100	77.741	Maylandia_zebra
ENSAPOG00000000397	shq1	99	51.424	ENSMGAG00000009640	SHQ1	72	60.364	Meleagris_gallopavo
ENSAPOG00000000397	shq1	70	60.641	ENSMAUG00000022030	Shq1	77	60.412	Mesocricetus_auratus
ENSAPOG00000000397	shq1	91	51.706	ENSMICG00000009224	SHQ1	75	60.870	Microcebus_murinus
ENSAPOG00000000397	shq1	70	61.187	ENSMOCG00000017836	Shq1	77	60.412	Microtus_ochrogaster
ENSAPOG00000000397	shq1	99	74.876	ENSMMOG00000010569	shq1	100	74.545	Mola_mola
ENSAPOG00000000397	shq1	78	55.152	ENSMODG00000003926	SHQ1	78	58.676	Monodelphis_domestica
ENSAPOG00000000397	shq1	99	77.152	ENSMALG00000008870	shq1	99	77.152	Monopterus_albus
ENSAPOG00000000397	shq1	70	60.412	MGP_CAROLIEiJ_G0028689	Shq1	76	60.412	Mus_caroli
ENSAPOG00000000397	shq1	77	58.836	ENSMUSG00000035378	Shq1	76	61.327	Mus_musculus
ENSAPOG00000000397	shq1	70	61.556	MGP_PahariEiJ_G0022440	Shq1	71	67.500	Mus_pahari
ENSAPOG00000000397	shq1	78	58.592	MGP_SPRETEiJ_G0029717	Shq1	76	61.327	Mus_spretus
ENSAPOG00000000397	shq1	94	51.082	ENSMPUG00000017006	SHQ1	74	61.556	Mustela_putorius_furo
ENSAPOG00000000397	shq1	82	50.958	ENSMLUG00000013539	SHQ1	74	59.744	Myotis_lucifugus
ENSAPOG00000000397	shq1	93	46.220	ENSNGAG00000023317	Shq1	77	53.968	Nannospalax_galili
ENSAPOG00000000397	shq1	85	75.479	ENSNBRG00000024004	shq1	100	75.862	Neolamprologus_brichardi
ENSAPOG00000000397	shq1	91	52.577	ENSNLEG00000002731	SHQ1	75	61.785	Nomascus_leucogenys
ENSAPOG00000000397	shq1	61	57.407	ENSMEUG00000009350	-	70	57.407	Notamacropus_eugenii
ENSAPOG00000000397	shq1	94	51.552	ENSODEG00000009192	SHQ1	51	60.538	Octodon_degus
ENSAPOG00000000397	shq1	99	78.197	ENSONIG00000020264	shq1	100	78.689	Oreochromis_niloticus
ENSAPOG00000000397	shq1	92	52.891	ENSOCUG00000016695	SHQ1	74	61.785	Oryctolagus_cuniculus
ENSAPOG00000000397	shq1	97	66.497	ENSORLG00000023538	shq1	98	65.500	Oryzias_latipes
ENSAPOG00000000397	shq1	98	66.667	ENSORLG00020003697	shq1	98	66.333	Oryzias_latipes_hni
ENSAPOG00000000397	shq1	98	65.500	ENSORLG00015021040	shq1	98	64.500	Oryzias_latipes_hsok
ENSAPOG00000000397	shq1	95	68.213	ENSOMEG00000001225	shq1	97	68.213	Oryzias_melastigma
ENSAPOG00000000397	shq1	79	58.097	ENSOGAG00000003898	SHQ1	77	61.818	Otolemur_garnettii
ENSAPOG00000000397	shq1	94	52.811	ENSOARG00000009547	SHQ1	75	61.591	Ovis_aries
ENSAPOG00000000397	shq1	92	53.460	ENSPPAG00000027714	SHQ1	75	62.014	Pan_paniscus
ENSAPOG00000000397	shq1	91	38.908	ENSPPAG00000043263	-	73	44.240	Pan_paniscus
ENSAPOG00000000397	shq1	91	53.484	ENSPPRG00000004769	SHQ1	76	61.098	Panthera_pardus
ENSAPOG00000000397	shq1	91	50.967	ENSPTIG00000011478	SHQ1	75	57.870	Panthera_tigris_altaica
ENSAPOG00000000397	shq1	90	39.261	ENSPTRG00000048303	-	73	43.418	Pan_troglodytes
ENSAPOG00000000397	shq1	92	53.460	ENSPTRG00000015106	SHQ1	75	62.014	Pan_troglodytes
ENSAPOG00000000397	shq1	70	62.700	ENSPANG00000002881	SHQ1	75	62.700	Papio_anubis
ENSAPOG00000000397	shq1	71	60.626	ENSPSIG00000005536	SHQ1	73	61.298	Pelodiscus_sinensis
ENSAPOG00000000397	shq1	98	62.189	ENSPMGG00000008838	shq1	98	60.833	Periophthalmus_magnuspinnatus
ENSAPOG00000000397	shq1	72	59.955	ENSPEMG00000000251	Shq1	78	59.417	Peromyscus_maniculatus_bairdii
ENSAPOG00000000397	shq1	70	56.621	ENSPMAG00000005372	shq1	98	57.534	Petromyzon_marinus
ENSAPOG00000000397	shq1	91	69.730	ENSPFOG00000003118	shq1	98	68.288	Poecilia_formosa
ENSAPOG00000000397	shq1	76	67.672	ENSPMEG00000011076	shq1	97	67.160	Poecilia_mexicana
ENSAPOG00000000397	shq1	83	68.442	ENSPREG00000000591	shq1	92	67.061	Poecilia_reticulata
ENSAPOG00000000397	shq1	92	53.114	ENSPPYG00000013717	SHQ1	75	62.243	Pongo_abelii
ENSAPOG00000000397	shq1	67	62.768	ENSPCAG00000009035	SHQ1	76	62.929	Procavia_capensis
ENSAPOG00000000397	shq1	70	61.872	ENSPCOG00000008415	SHQ1	75	61.872	Propithecus_coquereli
ENSAPOG00000000397	shq1	92	53.659	ENSPVAG00000017392	SHQ1	76	61.556	Pteropus_vampyrus
ENSAPOG00000000397	shq1	100	77.741	ENSPNYG00000003878	shq1	100	78.069	Pundamilia_nyererei
ENSAPOG00000000397	shq1	98	57.800	ENSPNAG00000026840	shq1	98	57.283	Pygocentrus_nattereri
ENSAPOG00000000397	shq1	91	52.120	ENSRBIG00000026280	SHQ1	75	60.698	Rhinopithecus_bieti
ENSAPOG00000000397	shq1	91	53.927	ENSRROG00000034126	SHQ1	76	62.929	Rhinopithecus_roxellana
ENSAPOG00000000397	shq1	70	54.462	ENSSBOG00000021038	SHQ1	73	54.691	Saimiri_boliviensis_boliviensis
ENSAPOG00000000397	shq1	70	61.644	ENSSHAG00000015077	SHQ1	77	60.722	Sarcophilus_harrisii
ENSAPOG00000000397	shq1	99	59.401	ENSSFOG00015016241	shq1	79	71.396	Scleropages_formosus
ENSAPOG00000000397	shq1	100	77.651	ENSSMAG00000016151	shq1	100	77.325	Scophthalmus_maximus
ENSAPOG00000000397	shq1	100	78.409	ENSSDUG00000011986	shq1	100	78.793	Seriola_dumerili
ENSAPOG00000000397	shq1	100	76.748	ENSSLDG00000013908	shq1	100	77.886	Seriola_lalandi_dorsalis
ENSAPOG00000000397	shq1	93	45.392	ENSSARG00000007119	SHQ1	60	58.480	Sorex_araneus
ENSAPOG00000000397	shq1	84	48.679	ENSSPUG00000011526	-	65	59.885	Sphenodon_punctatus
ENSAPOG00000000397	shq1	91	53.310	ENSSSCG00000011518	SHQ1	77	60.714	Sus_scrofa
ENSAPOG00000000397	shq1	67	63.723	ENSTGUG00000009933	SHQ1	76	63.409	Taeniopygia_guttata
ENSAPOG00000000397	shq1	99	65.842	ENSTRUG00000009446	shq1	99	64.132	Takifugu_rubripes
ENSAPOG00000000397	shq1	77	70.000	ENSTNIG00000007354	shq1	98	72.624	Tetraodon_nigroviridis
ENSAPOG00000000397	shq1	90	53.833	ENSTTRG00000005320	SHQ1	77	60.802	Tursiops_truncatus
ENSAPOG00000000397	shq1	91	52.827	ENSUMAG00000024031	SHQ1	74	61.449	Ursus_maritimus
ENSAPOG00000000397	shq1	73	50.110	ENSVPAG00000004880	SHQ1	60	60.312	Vicugna_pacos
ENSAPOG00000000397	shq1	92	52.249	ENSVVUG00000013906	SHQ1	75	61.785	Vulpes_vulpes
ENSAPOG00000000397	shq1	70	61.432	ENSXETG00000032215	shq1	71	61.201	Xenopus_tropicalis