EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000000866 (Gene tree)
Gene ID: 110952245
Gene Symbol: lig4
Alias: zgc:165595
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 7351 bases
Position: chrMVNR01000233.1:450834-458184
Accession: 110952245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000004764	RNA_ligase	PF09414.10	1.2e-10	1	1
ENSAPOP00000024211	RNA_ligase	PF09414.10	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000009483	-	4624	-	ENSAPOP00000004764	908 (aa)	-	UPI000B8F2579
ENSAPOT00000009468	-	4427	XM_022195703	ENSAPOP00000024211	908 (aa)	XP_022051395	UPI000B8F2579

Gene Model

Click here to download ENSAPOG00000000866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000000866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000000866	lig4	99	66.154	ENSG00000174405	LIG4	100	66.588	Homo_sapiens
ENSAPOG00000000866	lig4	99	64.629	ENSAMEG00000019685	LIG4	99	64.301	Ailuropoda_melanoleuca
ENSAPOG00000000866	lig4	100	91.978	ENSACIG00000018309	lig4	99	92.079	Amphilophus_citrinellus
ENSAPOG00000000866	lig4	100	97.687	ENSAOCG00000011768	lig4	100	97.687	Amphiprion_ocellaris
ENSAPOG00000000866	lig4	100	97.907	ENSAPEG00000017815	lig4	100	97.907	Amphiprion_percula
ENSAPOG00000000866	lig4	100	90.110	ENSATEG00000005583	lig4	100	90.110	Anabas_testudineus
ENSAPOG00000000866	lig4	96	67.426	ENSAPLG00000001673	LIG4	99	67.426	Anas_platyrhynchos
ENSAPOG00000000866	lig4	99	66.961	ENSACAG00000014566	LIG4	99	66.961	Anolis_carolinensis
ENSAPOG00000000866	lig4	99	66.081	ENSANAG00000012446	LIG4	99	65.862	Aotus_nancymaae
ENSAPOG00000000866	lig4	100	90.110	ENSACLG00000027051	lig4	99	90.209	Astatotilapia_calliptera
ENSAPOG00000000866	lig4	100	79.935	ENSAMXG00000008192	lig4	95	79.935	Astyanax_mexicanus
ENSAPOG00000000866	lig4	99	65.824	ENSBTAG00000015868	LIG4	99	65.604	Bos_taurus
ENSAPOG00000000866	lig4	99	65.862	ENSCJAG00000014689	LIG4	99	65.642	Callithrix_jacchus
ENSAPOG00000000866	lig4	99	65.385	ENSCAFG00000006031	LIG4	99	65.165	Canis_familiaris
ENSAPOG00000000866	lig4	99	65.385	ENSCAFG00020021230	LIG4	99	65.165	Canis_lupus_dingo
ENSAPOG00000000866	lig4	99	65.604	ENSCHIG00000001019	LIG4	99	65.385	Capra_hircus
ENSAPOG00000000866	lig4	99	65.116	ENSCAPG00000006284	LIG4	99	64.895	Cavia_aperea
ENSAPOG00000000866	lig4	99	65.055	ENSCPOG00000014266	LIG4	99	64.835	Cavia_porcellus
ENSAPOG00000000866	lig4	99	66.044	ENSCCAG00000019971	LIG4	99	65.824	Cebus_capucinus
ENSAPOG00000000866	lig4	99	65.495	ENSCATG00000021075	LIG4	99	65.275	Cercocebus_atys
ENSAPOG00000000866	lig4	99	65.532	ENSCLAG00000003376	LIG4	99	65.313	Chinchilla_lanigera
ENSAPOG00000000866	lig4	99	65.088	ENSCSAG00000000211	LIG4	99	64.868	Chlorocebus_sabaeus
ENSAPOG00000000866	lig4	99	68.701	ENSCPBG00000023291	LIG4	100	68.053	Chrysemys_picta_bellii
ENSAPOG00000000866	lig4	69	47.709	ENSCING00000009536	-	96	47.709	Ciona_intestinalis
ENSAPOG00000000866	lig4	83	45.000	ENSCSAVG00000010336	-	98	45.000	Ciona_savignyi
ENSAPOG00000000866	lig4	99	64.868	ENSCANG00000005805	LIG4	99	64.648	Colobus_angolensis_palliatus
ENSAPOG00000000866	lig4	99	64.984	ENSCGRG00001012072	Lig4	99	64.984	Cricetulus_griseus_chok1gshd
ENSAPOG00000000866	lig4	99	64.984	ENSCGRG00000013417	Lig4	99	64.984	Cricetulus_griseus_crigri
ENSAPOG00000000866	lig4	97	85.569	ENSCSEG00000013905	lig4	96	85.569	Cynoglossus_semilaevis
ENSAPOG00000000866	lig4	100	89.549	ENSCVAG00000007896	lig4	100	89.549	Cyprinodon_variegatus
ENSAPOG00000000866	lig4	100	80.418	ENSDARG00000060620	lig4	100	80.418	Danio_rerio
ENSAPOG00000000866	lig4	99	65.093	ENSDNOG00000000513	LIG4	99	64.764	Dasypus_novemcinctus
ENSAPOG00000000866	lig4	99	65.559	ENSDORG00000027303	Lig4	99	65.449	Dipodomys_ordii
ENSAPOG00000000866	lig4	92	30.769	FBgn0030506	Lig4	93	30.769	Drosophila_melanogaster
ENSAPOG00000000866	lig4	98	63.234	ENSETEG00000015563	LIG4	100	63.344	Echinops_telfairi
ENSAPOG00000000866	lig4	99	44.654	ENSEBUG00000014243	lig4	99	44.654	Eptatretus_burgeri
ENSAPOG00000000866	lig4	99	64.984	ENSEASG00005022073	LIG4	99	64.874	Equus_asinus_asinus
ENSAPOG00000000866	lig4	99	64.874	ENSECAG00000003257	LIG4	99	64.764	Equus_caballus
ENSAPOG00000000866	lig4	98	84.205	ENSELUG00000006787	lig4	99	84.316	Esox_lucius
ENSAPOG00000000866	lig4	99	64.563	ENSFCAG00000031985	LIG4	99	64.230	Felis_catus
ENSAPOG00000000866	lig4	88	69.727	ENSFALG00000004214	LIG4	98	69.727	Ficedula_albicollis
ENSAPOG00000000866	lig4	99	64.725	ENSFDAG00000008973	LIG4	99	64.505	Fukomys_damarensis
ENSAPOG00000000866	lig4	100	88.145	ENSFHEG00000007398	lig4	91	88.145	Fundulus_heteroclitus
ENSAPOG00000000866	lig4	86	78.361	ENSGMOG00000012843	lig4	99	78.361	Gadus_morhua
ENSAPOG00000000866	lig4	99	66.923	ENSGALG00000016854	LIG4	99	66.923	Gallus_gallus
ENSAPOG00000000866	lig4	99	87.404	ENSGAFG00000019779	lig4	96	87.842	Gambusia_affinis
ENSAPOG00000000866	lig4	99	85.651	ENSGACG00000014135	lig4	99	85.982	Gasterosteus_aculeatus
ENSAPOG00000000866	lig4	99	65.934	ENSGGOG00000027771	LIG4	99	65.714	Gorilla_gorilla
ENSAPOG00000000866	lig4	100	89.890	ENSHBUG00000006245	lig4	100	89.890	Haplochromis_burtoni
ENSAPOG00000000866	lig4	99	64.945	ENSHGLG00000000718	LIG4	99	64.725	Heterocephalus_glaber_female
ENSAPOG00000000866	lig4	99	64.945	ENSHGLG00100003265	LIG4	99	64.725	Heterocephalus_glaber_male
ENSAPOG00000000866	lig4	100	83.333	ENSHCOG00000012010	lig4	100	83.333	Hippocampus_comes
ENSAPOG00000000866	lig4	100	79.208	ENSIPUG00000013748	lig4	100	79.208	Ictalurus_punctatus
ENSAPOG00000000866	lig4	99	65.597	ENSSTOG00000024303	LIG4	99	65.376	Ictidomys_tridecemlineatus
ENSAPOG00000000866	lig4	99	65.495	ENSJJAG00000006750	Lig4	99	65.165	Jaculus_jaculus
ENSAPOG00000000866	lig4	100	85.919	ENSKMAG00000001149	lig4	100	85.919	Kryptolebias_marmoratus
ENSAPOG00000000866	lig4	91	90.931	ENSLBEG00000014578	lig4	100	90.931	Labrus_bergylta
ENSAPOG00000000866	lig4	100	68.092	ENSLACG00000003282	LIG4	100	68.092	Latimeria_chalumnae
ENSAPOG00000000866	lig4	100	73.494	ENSLOCG00000008901	lig4	99	73.494	Lepisosteus_oculatus
ENSAPOG00000000866	lig4	99	64.035	ENSLAFG00000031152	LIG4	99	63.925	Loxodonta_africana
ENSAPOG00000000866	lig4	99	65.198	ENSMFAG00000037235	LIG4	99	64.978	Macaca_fascicularis
ENSAPOG00000000866	lig4	99	65.088	ENSMMUG00000008874	LIG4	99	64.868	Macaca_mulatta
ENSAPOG00000000866	lig4	99	65.198	ENSMNEG00000023575	LIG4	99	64.978	Macaca_nemestrina
ENSAPOG00000000866	lig4	99	64.978	ENSMLEG00000026720	LIG4	99	64.758	Mandrillus_leucophaeus
ENSAPOG00000000866	lig4	100	90.440	ENSMAMG00000008472	lig4	99	90.440	Mastacembelus_armatus
ENSAPOG00000000866	lig4	99	90.099	ENSMZEG00005001855	lig4	99	90.099	Maylandia_zebra
ENSAPOG00000000866	lig4	100	66.447	ENSMGAG00000015532	LIG4	100	66.447	Meleagris_gallopavo
ENSAPOG00000000866	lig4	99	63.846	ENSMOCG00000019000	Lig4	99	63.846	Microtus_ochrogaster
ENSAPOG00000000866	lig4	100	88.791	ENSMMOG00000004390	lig4	100	88.791	Mola_mola
ENSAPOG00000000866	lig4	99	65.570	ENSMODG00000025064	LIG4	99	65.680	Monodelphis_domestica
ENSAPOG00000000866	lig4	100	89.341	ENSMALG00000008555	lig4	100	89.341	Monopterus_albus
ENSAPOG00000000866	lig4	99	65.055	MGP_CAROLIEiJ_G0030809	Lig4	99	64.945	Mus_caroli
ENSAPOG00000000866	lig4	99	64.945	ENSMUSG00000049717	Lig4	99	64.835	Mus_musculus
ENSAPOG00000000866	lig4	99	65.055	MGP_PahariEiJ_G0021270	Lig4	99	65.055	Mus_pahari
ENSAPOG00000000866	lig4	99	65.165	MGP_SPRETEiJ_G0031917	Lig4	99	65.055	Mus_spretus
ENSAPOG00000000866	lig4	99	64.945	ENSMPUG00000018675	LIG4	99	64.615	Mustela_putorius_furo
ENSAPOG00000000866	lig4	99	65.752	ENSMLUG00000001267	LIG4	99	65.532	Myotis_lucifugus
ENSAPOG00000000866	lig4	99	65.165	ENSNGAG00000013258	Lig4	99	65.055	Nannospalax_galili
ENSAPOG00000000866	lig4	100	90.110	ENSNBRG00000021252	lig4	99	90.209	Neolamprologus_brichardi
ENSAPOG00000000866	lig4	99	65.275	ENSNLEG00000007888	LIG4	99	65.055	Nomascus_leucogenys
ENSAPOG00000000866	lig4	99	63.996	ENSOPRG00000005765	LIG4	99	63.886	Ochotona_princeps
ENSAPOG00000000866	lig4	99	65.093	ENSODEG00000019683	LIG4	99	64.874	Octodon_degus
ENSAPOG00000000866	lig4	99	90.869	ENSONIG00000011969	lig4	99	90.869	Oreochromis_niloticus
ENSAPOG00000000866	lig4	99	65.093	ENSOCUG00000015734	LIG4	99	64.984	Oryctolagus_cuniculus
ENSAPOG00000000866	lig4	99	85.714	ENSORLG00000004041	lig4	99	85.714	Oryzias_latipes
ENSAPOG00000000866	lig4	99	85.714	ENSORLG00020019607	lig4	99	85.714	Oryzias_latipes_hni
ENSAPOG00000000866	lig4	99	86.044	ENSORLG00015017754	lig4	99	86.044	Oryzias_latipes_hsok
ENSAPOG00000000866	lig4	76	90.684	ENSOMEG00000003459	lig4	99	90.684	Oryzias_melastigma
ENSAPOG00000000866	lig4	99	65.646	ENSOGAG00000032120	LIG4	99	65.536	Otolemur_garnettii
ENSAPOG00000000866	lig4	82	69.758	ENSOARG00000005590	LIG4	98	69.758	Ovis_aries
ENSAPOG00000000866	lig4	99	65.934	ENSPPAG00000032998	LIG4	99	65.714	Pan_paniscus
ENSAPOG00000000866	lig4	99	65.116	ENSPPRG00000017804	LIG4	99	64.784	Panthera_pardus
ENSAPOG00000000866	lig4	99	65.006	ENSPTIG00000010051	LIG4	99	64.673	Panthera_tigris_altaica
ENSAPOG00000000866	lig4	99	66.044	ENSPTRG00000006025	LIG4	99	65.824	Pan_troglodytes
ENSAPOG00000000866	lig4	99	65.604	ENSPANG00000007562	LIG4	99	65.385	Papio_anubis
ENSAPOG00000000866	lig4	100	78.328	ENSPKIG00000011645	lig4	99	78.328	Paramormyrops_kingsleyae
ENSAPOG00000000866	lig4	100	67.763	ENSPSIG00000001504	LIG4	100	67.544	Pelodiscus_sinensis
ENSAPOG00000000866	lig4	98	80.942	ENSPMGG00000013486	lig4	100	80.504	Periophthalmus_magnuspinnatus
ENSAPOG00000000866	lig4	99	64.325	ENSPEMG00000000076	Lig4	99	64.215	Peromyscus_maniculatus_bairdii
ENSAPOG00000000866	lig4	99	65.093	ENSPCIG00000021882	LIG4	99	64.984	Phascolarctos_cinereus
ENSAPOG00000000866	lig4	100	88.706	ENSPFOG00000000797	lig4	100	89.145	Poecilia_formosa
ENSAPOG00000000866	lig4	100	88.596	ENSPLAG00000001196	lig4	100	89.035	Poecilia_latipinna
ENSAPOG00000000866	lig4	100	88.816	ENSPMEG00000021353	lig4	100	89.254	Poecilia_mexicana
ENSAPOG00000000866	lig4	100	87.829	ENSPREG00000007323	lig4	100	88.377	Poecilia_reticulata
ENSAPOG00000000866	lig4	99	65.275	ENSPPYG00000005540	LIG4	99	65.055	Pongo_abelii
ENSAPOG00000000866	lig4	99	64.576	ENSPVAG00000016403	LIG4	99	64.145	Pteropus_vampyrus
ENSAPOG00000000866	lig4	100	90.110	ENSPNYG00000009660	lig4	99	90.209	Pundamilia_nyererei
ENSAPOG00000000866	lig4	99	82.143	ENSPNAG00000028056	lig4	99	82.143	Pygocentrus_nattereri
ENSAPOG00000000866	lig4	99	82.143	ENSPNAG00000028069	LIG4	99	82.143	Pygocentrus_nattereri
ENSAPOG00000000866	lig4	99	64.615	ENSRNOG00000014605	Lig4	99	64.505	Rattus_norvegicus
ENSAPOG00000000866	lig4	99	64.537	ENSRBIG00000039962	LIG4	99	64.317	Rhinopithecus_bieti
ENSAPOG00000000866	lig4	99	65.088	ENSRROG00000006040	LIG4	99	64.868	Rhinopithecus_roxellana
ENSAPOG00000000866	lig4	99	65.752	ENSSBOG00000019029	LIG4	99	65.532	Saimiri_boliviensis_boliviensis
ENSAPOG00000000866	lig4	99	62.788	ENSSHAG00000009525	LIG4	99	62.898	Sarcophilus_harrisii
ENSAPOG00000000866	lig4	100	79.758	ENSSFOG00015012835	lig4	100	79.758	Scleropages_formosus
ENSAPOG00000000866	lig4	100	84.692	ENSSMAG00000011267	lig4	100	84.692	Scophthalmus_maximus
ENSAPOG00000000866	lig4	100	88.840	ENSSDUG00000010343	lig4	100	89.059	Seriola_dumerili
ENSAPOG00000000866	lig4	100	87.856	ENSSLDG00000003239	lig4	100	87.856	Seriola_lalandi_dorsalis
ENSAPOG00000000866	lig4	99	64.356	ENSSARG00000006573	LIG4	99	64.136	Sorex_araneus
ENSAPOG00000000866	lig4	92	69.405	ENSSPUG00000002444	LIG4	100	69.286	Sphenodon_punctatus
ENSAPOG00000000866	lig4	100	93.736	ENSSPAG00000001609	lig4	100	93.736	Stegastes_partitus
ENSAPOG00000000866	lig4	99	65.237	ENSSSCG00000009540	LIG4	99	64.906	Sus_scrofa
ENSAPOG00000000866	lig4	99	66.998	ENSTGUG00000010795	LIG4	100	66.998	Taeniopygia_guttata
ENSAPOG00000000866	lig4	100	87.033	ENSTRUG00000009984	lig4	100	87.033	Takifugu_rubripes
ENSAPOG00000000866	lig4	100	84.471	ENSTNIG00000010348	lig4	100	84.692	Tetraodon_nigroviridis
ENSAPOG00000000866	lig4	99	65.532	ENSTBEG00000017741	LIG4	99	65.532	Tupaia_belangeri
ENSAPOG00000000866	lig4	99	65.055	ENSTTRG00000012660	LIG4	99	64.835	Tursiops_truncatus
ENSAPOG00000000866	lig4	99	64.498	ENSUAMG00000003773	LIG4	99	64.168	Ursus_americanus
ENSAPOG00000000866	lig4	100	67.873	ENSXETG00000002654	lig4	100	67.873	Xenopus_tropicalis
ENSAPOG00000000866	lig4	100	88.048	ENSXCOG00000017401	lig4	100	88.487	Xiphophorus_couchianus
ENSAPOG00000000866	lig4	100	88.377	ENSXMAG00000015142	lig4	99	88.816	Xiphophorus_maculatus