EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000001040 (Gene tree)
Gene ID: 110965460
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 9335 bases
Position: chrMVNR01001422.1:24693-34027
Accession: 110965460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000033370	MMR_HSR1	PF01926.23	4.7e-05	1	1
ENSAPOP00000033357	MMR_HSR1	PF01926.23	5.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000028148	-	576	-	ENSAPOP00000033357	191 (aa)	-	-
ENSAPOT00000034484	-	3996	XM_022214524	ENSAPOP00000033370	200 (aa)	XP_022070216	UPI000B8F5372

Gene Model

Click here to download ENSAPOG00000001040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000001040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000001040	-	84	37.059	ENSAPOG00000001356	si:ch73-116o1.2	81	37.059
ENSAPOG00000001040	-	88	38.547	ENSAPOG00000002585	RAB7A	86	38.547
ENSAPOG00000001040	-	80	44.444	ENSAPOG00000016512	-	76	44.304
ENSAPOG00000001040	-	61	30.769	ENSAPOG00000010213	arl3l2	60	30.769
ENSAPOG00000001040	-	98	54.500	ENSAPOG00000008143	-	98	54.500
ENSAPOG00000001040	-	85	40.571	ENSAPOG00000007269	rab9b	77	40.571
ENSAPOG00000001040	-	98	54.000	ENSAPOG00000007746	rab1ab	98	54.000
ENSAPOG00000001040	-	89	56.742	ENSAPOG00000004980	-	83	56.742
ENSAPOG00000001040	-	80	35.948	ENSAPOG00000004311	-	83	35.948
ENSAPOG00000001040	-	87	36.994	ENSAPOG00000008892	rab23	77	36.757
ENSAPOG00000001040	-	94	42.347	ENSAPOG00000000952	rab33a	92	42.347
ENSAPOG00000001040	-	96	35.417	ENSAPOG00000023684	hrasb	98	35.417
ENSAPOG00000001040	-	95	39.086	ENSAPOG00000007503	zgc:101559	84	39.086
ENSAPOG00000001040	-	80	38.562	ENSAPOG00000011363	-	70	37.888
ENSAPOG00000001040	-	86	44.767	ENSAPOG00000008216	rab25b	83	44.767
ENSAPOG00000001040	-	99	47.525	ENSAPOG00000007363	rab35b	100	47.525
ENSAPOG00000001040	-	88	38.547	ENSAPOG00000016091	-	86	38.547
ENSAPOG00000001040	-	95	42.932	ENSAPOG00000019881	rab18b	93	42.932
ENSAPOG00000001040	-	84	44.910	ENSAPOG00000008641	rab14	78	44.910
ENSAPOG00000001040	-	90	44.865	ENSAPOG00000010760	rab18a	88	44.865
ENSAPOG00000001040	-	82	38.690	ENSAPOG00000021928	rab9a	81	38.690
ENSAPOG00000001040	-	97	52.525	ENSAPOG00000012767	rab1ba	98	52.525
ENSAPOG00000001040	-	83	31.953	ENSAPOG00000014798	-	78	31.953
ENSAPOG00000001040	-	85	46.512	ENSAPOG00000014970	-	81	46.512
ENSAPOG00000001040	-	94	39.894	ENSAPOG00000021268	rab25a	89	39.894
ENSAPOG00000001040	-	84	51.250	ENSAPOG00000008263	si:dkey-16l2.16	87	47.802
ENSAPOG00000001040	-	95	40.625	ENSAPOG00000021391	rab5aa	89	40.625
ENSAPOG00000001040	-	79	40.260	ENSAPOG00000019147	rab34b	60	43.200
ENSAPOG00000001040	-	87	34.286	ENSAPOG00000003215	-	93	34.286
ENSAPOG00000001040	-	87	40.314	ENSAPOG00000019727	rab33ba	77	40.314
ENSAPOG00000001040	-	80	30.573	ENSAPOG00000020278	dnajc27	58	30.573
ENSAPOG00000001040	-	79	40.909	ENSAPOG00000003165	rab34a	60	40.625
ENSAPOG00000001040	-	90	33.514	ENSAPOG00000004154	rras2	94	34.010
ENSAPOG00000001040	-	87	47.399	ENSAPOG00000023455	rab11bb	79	47.399
ENSAPOG00000001040	-	84	47.619	ENSAPOG00000009138	rab2a	79	47.619
ENSAPOG00000001040	-	91	34.555	ENSAPOG00000014783	kras	98	35.233
ENSAPOG00000001040	-	80	36.601	ENSAPOG00000015316	rhebl1	83	36.601
ENSAPOG00000001040	-	93	45.161	ENSAPOG00000018256	rab11a	87	45.161
ENSAPOG00000001040	-	84	41.420	ENSAPOG00000009188	rab42a	78	41.420
ENSAPOG00000001040	-	79	41.830	ENSAPOG00000022911	rab36	60	41.250
ENSAPOG00000001040	-	97	43.069	ENSAPOG00000008251	rab11al	94	43.069
ENSAPOG00000001040	-	61	30.769	ENSAPOG00000024460	arl3	63	30.769
ENSAPOG00000001040	-	86	45.665	ENSAPOG00000005301	RAB39B	81	45.665
ENSAPOG00000001040	-	82	40.476	ENSAPOG00000005603	RAB9A	77	40.476
ENSAPOG00000001040	-	98	31.156	ENSAPOG00000015680	-	95	31.156
ENSAPOG00000001040	-	94	53.591	ENSAPOG00000008754	rab15	85	53.591
ENSAPOG00000001040	-	82	34.177	ENSAPOG00000023708	rabl2	71	33.951
ENSAPOG00000001040	-	80	46.405	ENSAPOG00000014397	rab6bb	76	45.570
ENSAPOG00000001040	-	80	30.128	ENSAPOG00000013337	rasd4	74	30.128
ENSAPOG00000001040	-	86	57.310	ENSAPOG00000006211	RAB15	81	57.310
ENSAPOG00000001040	-	80	45.098	ENSAPOG00000005731	rab6a	75	44.937
ENSAPOG00000001040	-	84	42.775	ENSAPOG00000019100	rab6ba	83	42.775
ENSAPOG00000001040	-	80	43.671	ENSAPOG00000011559	rab22a	83	39.752
ENSAPOG00000001040	-	76	45.033	ENSAPOG00000005341	-	62	45.033
ENSAPOG00000001040	-	81	42.857	ENSAPOG00000016864	rab5c	88	38.144
ENSAPOG00000001040	-	86	48.538	ENSAPOG00000022625	rab30	84	48.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000001040	-	100	67.188	ENSACIG00000003157	-	100	67.188	Amphilophus_citrinellus
ENSAPOG00000001040	-	100	100.000	ENSAOCG00000015908	-	100	100.000	Amphiprion_ocellaris
ENSAPOG00000001040	-	100	100.000	ENSAPEG00000004121	-	100	100.000	Amphiprion_percula
ENSAPOG00000001040	-	100	94.000	ENSATEG00000023662	-	100	94.000	Anabas_testudineus
ENSAPOG00000001040	-	100	96.500	ENSACLG00000019643	-	100	96.500	Astatotilapia_calliptera
ENSAPOG00000001040	-	100	93.500	ENSCVAG00000022649	-	100	93.500	Cyprinodon_variegatus
ENSAPOG00000001040	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSAPOG00000001040	-	100	92.000	ENSGAFG00000014787	-	100	92.000	Gambusia_affinis
ENSAPOG00000001040	-	100	96.500	ENSHBUG00000003728	-	100	96.500	Haplochromis_burtoni
ENSAPOG00000001040	-	100	96.500	ENSMZEG00005015817	-	100	96.500	Maylandia_zebra
ENSAPOG00000001040	-	100	96.000	ENSMMOG00000003924	-	100	96.000	Mola_mola
ENSAPOG00000001040	-	100	96.000	ENSMALG00000020807	-	100	96.000	Monopterus_albus
ENSAPOG00000001040	-	57	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSAPOG00000001040	-	100	92.500	ENSORLG00000025395	-	100	92.500	Oryzias_latipes
ENSAPOG00000001040	-	100	92.500	ENSORLG00020009535	-	100	92.500	Oryzias_latipes_hni
ENSAPOG00000001040	-	100	93.000	ENSORLG00015015518	-	100	93.000	Oryzias_latipes_hsok
ENSAPOG00000001040	-	100	89.055	ENSPKIG00000014528	-	100	89.055	Paramormyrops_kingsleyae
ENSAPOG00000001040	-	100	93.500	ENSPFOG00000014418	-	100	93.500	Poecilia_formosa
ENSAPOG00000001040	-	100	93.500	ENSPLAG00000003181	-	100	93.500	Poecilia_latipinna
ENSAPOG00000001040	-	100	93.500	ENSPMEG00000008020	-	100	93.500	Poecilia_mexicana
ENSAPOG00000001040	-	100	93.500	ENSPMEG00000022988	-	100	93.500	Poecilia_mexicana
ENSAPOG00000001040	-	100	95.500	ENSPNYG00000004681	-	100	95.500	Pundamilia_nyererei
ENSAPOG00000001040	-	100	91.500	ENSSFOG00015021754	rab13	100	91.500	Scleropages_formosus
ENSAPOG00000001040	-	100	97.500	ENSSMAG00000016376	-	100	97.500	Scophthalmus_maximus
ENSAPOG00000001040	-	100	67.150	ENSSMAG00000002569	-	100	67.150	Scophthalmus_maximus
ENSAPOG00000001040	-	100	99.000	ENSSDUG00000006307	-	100	99.000	Seriola_dumerili
ENSAPOG00000001040	-	100	99.000	ENSSLDG00000015823	-	100	99.000	Seriola_lalandi_dorsalis
ENSAPOG00000001040	-	100	99.000	ENSSPAG00000022440	-	100	99.000	Stegastes_partitus
ENSAPOG00000001040	-	100	95.500	ENSTNIG00000018319	-	100	95.500	Tetraodon_nigroviridis
ENSAPOG00000001040	-	100	92.500	ENSXMAG00000016094	-	100	92.500	Xiphophorus_maculatus