EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000001161 (Gene tree)
Gene ID
110950063
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
11430 bases
Position
chrMVNR01000133.1:610403-621832
Accession
110950063
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000020984PABPPF00658.187e-3111
ENSAPOP00000020984RRM_5PF13893.61.5e-0911
ENSAPOP00000020984RRM_1PF00076.227.8e-9014
ENSAPOP00000020984RRM_1PF00076.227.8e-9024
ENSAPOP00000020984RRM_1PF00076.227.8e-9034
ENSAPOP00000020984RRM_1PF00076.227.8e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000017584-3303XM_022192456ENSAPOP00000020984626 (aa)XP_022048148UPI000B8F718A
Gene Model
Click here to download ENSAPOG00000001161's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000001161's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000001161pabpc46031.333ENSAPOG00000022121ELAVL28531.126
ENSAPOG00000001161pabpc45337.500ENSAPOG00000017441-5137.500
ENSAPOG00000001161pabpc410076.131ENSAPOG00000015105pabpc1a9876.592
ENSAPOG00000001161pabpc49765.434ENSAPOG00000010842pabpc1l9964.603
ENSAPOG00000001161pabpc45130.822ENSAPOG00000007089tia1l6930.822
ENSAPOG00000001161pabpc46139.744ENSAPOG00000000306rbm39b7537.349
ENSAPOG00000001161pabpc45338.636ENSAPOG00000008530-5139.535
ENSAPOG00000001161pabpc49876.471ENSAPOG00000017776pabpc1b9976.244
ENSAPOG00000001161pabpc45835.238ENSAPOG00000024000celf16535.238
ENSAPOG00000001161pabpc45934.940ENSAPOG00000020329elavl48434.940
ENSAPOG00000001161pabpc45934.737ENSAPOG00000023300rbms2a5133.981
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000001161pabpc410084.848ENSG00000090621PABPC49996.396Homo_sapiens
ENSAPOG00000001161pabpc49850.161ENSAMEG00000015083-9849.596Ailuropoda_melanoleuca
ENSAPOG00000001161pabpc410079.671ENSAMEG00000011535-9979.394Ailuropoda_melanoleuca
ENSAPOG00000001161pabpc410096.355ENSACIG00000023343pabpc410096.355Amphilophus_citrinellus
ENSAPOG00000001161pabpc410099.521ENSAOCG00000021529pabpc410099.521Amphiprion_ocellaris
ENSAPOG00000001161pabpc410099.521ENSAPEG00000019196pabpc410099.521Amphiprion_percula
ENSAPOG00000001161pabpc410097.608ENSATEG00000007402pabpc410097.608Anabas_testudineus
ENSAPOG00000001161pabpc49985.197ENSAPLG00000009729-9985.215Anas_platyrhynchos
ENSAPOG00000001161pabpc49884.752ENSACAG00000002544PABPC49984.050Anolis_carolinensis
ENSAPOG00000001161pabpc410082.298ENSANAG00000025079PABPC49983.201Aotus_nancymaae
ENSAPOG00000001161pabpc410096.810ENSACLG00000019558pabpc49997.087Astatotilapia_calliptera
ENSAPOG00000001161pabpc49986.212ENSAMXG00000018779pabpc49886.817Astyanax_mexicanus
ENSAPOG00000001161pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSAPOG00000001161pabpc410081.651ENSBTAG00000017125PABPC49981.085Bos_taurus
ENSAPOG00000001161pabpc410082.298ENSCJAG00000002512-9983.201Callithrix_jacchus
ENSAPOG00000001161pabpc47480.909ENSCJAG00000045953-8479.091Callithrix_jacchus
ENSAPOG00000001161pabpc410083.281ENSCAFG00000003081PABPC49983.043Canis_familiaris
ENSAPOG00000001161pabpc410079.821ENSCAFG00020004161PABPC49979.545Canis_lupus_dingo
ENSAPOG00000001161pabpc410079.671ENSCHIG00000019398-9979.242Capra_hircus
ENSAPOG00000001161pabpc410065.070ENSCHIG00000023385-9964.937Capra_hircus
ENSAPOG00000001161pabpc410083.594ENSTSYG00000006532PABPC49983.360Carlito_syrichta
ENSAPOG00000001161pabpc49983.360ENSCAPG00000015984PABPC49982.989Cavia_aperea
ENSAPOG00000001161pabpc410082.764ENSCPOG00000009552PABPC49983.360Cavia_porcellus
ENSAPOG00000001161pabpc410082.298ENSCCAG00000037306PABPC49983.201Cebus_capucinus
ENSAPOG00000001161pabpc410082.453ENSCATG00000042164PABPC49983.360Cercocebus_atys
ENSAPOG00000001161pabpc410082.609ENSCLAG00000011899PABPC49983.360Chinchilla_lanigera
ENSAPOG00000001161pabpc410080.269ENSCSAG00000001135PABPC49979.697Chlorocebus_sabaeus
ENSAPOG00000001161pabpc48789.211ENSCHOG00000005327PABPC47989.757Choloepus_hoffmanni
ENSAPOG00000001161pabpc49986.299ENSCPBG00000001038PABPC49986.328Chrysemys_picta_bellii
ENSAPOG00000001161pabpc49982.677ENSCANG00000034177PABPC49983.601Colobus_angolensis_palliatus
ENSAPOG00000001161pabpc49885.505ENSCGRG00001018166Pabpc49884.903Cricetulus_griseus_chok1gshd
ENSAPOG00000001161pabpc49785.785ENSCGRG00000009777Pabpc49885.173Cricetulus_griseus_crigri
ENSAPOG00000001161pabpc410096.172ENSCSEG00000000130pabpc49996.602Cynoglossus_semilaevis
ENSAPOG00000001161pabpc49996.266ENSCVAG00000019246pabpc410096.266Cyprinodon_variegatus
ENSAPOG00000001161pabpc49892.982ENSDARG00000059259pabpc410092.727Danio_rerio
ENSAPOG00000001161pabpc49981.786ENSDNOG00000018444-9981.964Dasypus_novemcinctus
ENSAPOG00000001161pabpc410081.930ENSDORG00000011581Pabpc49981.522Dipodomys_ordii
ENSAPOG00000001161pabpc410090.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSAPOG00000001161pabpc48554.212ENSETEG00000009172-9952.450Echinops_telfairi
ENSAPOG00000001161pabpc49677.398ENSEBUG00000013782pabpc49976.752Eptatretus_burgeri
ENSAPOG00000001161pabpc49876.471ENSEBUG00000000992pabpc49976.153Eptatretus_burgeri
ENSAPOG00000001161pabpc410079.821ENSEASG00005014119PABPC49979.394Equus_asinus_asinus
ENSAPOG00000001161pabpc410079.821ENSECAG00000009396PABPC49979.394Equus_caballus
ENSAPOG00000001161pabpc49779.601ENSEEUG00000002962PABPC49978.636Erinaceus_europaeus
ENSAPOG00000001161pabpc49893.153ENSELUG00000003195pabpc49992.857Esox_lucius
ENSAPOG00000001161pabpc410083.281ENSFCAG00000015254-9983.043Felis_catus
ENSAPOG00000001161pabpc49985.804ENSFALG00000000543PABPC49985.828Ficedula_albicollis
ENSAPOG00000001161pabpc48951.674ENSFDAG00000010581-9948.547Fukomys_damarensis
ENSAPOG00000001161pabpc410079.821ENSFDAG00000020016-9979.848Fukomys_damarensis
ENSAPOG00000001161pabpc49996.805ENSFHEG00000007548pabpc410096.805Fundulus_heteroclitus
ENSAPOG00000001161pabpc410092.151ENSGMOG00000019025pabpc49992.516Gadus_morhua
ENSAPOG00000001161pabpc49986.142ENSGALG00000003800PABPC49986.169Gallus_gallus
ENSAPOG00000001161pabpc49997.608ENSGAFG00000018195pabpc410097.608Gambusia_affinis
ENSAPOG00000001161pabpc410094.896ENSGACG00000007179pabpc49994.984Gasterosteus_aculeatus
ENSAPOG00000001161pabpc49986.457ENSGAGG00000001888PABPC49986.486Gopherus_agassizii
ENSAPOG00000001161pabpc410082.298ENSGGOG00000004002PABPC49983.201Gorilla_gorilla
ENSAPOG00000001161pabpc410096.651ENSHBUG00000020206pabpc49996.926Haplochromis_burtoni
ENSAPOG00000001161pabpc410082.609ENSHGLG00000011162PABPC49983.201Heterocephalus_glaber_female
ENSAPOG00000001161pabpc410082.609ENSHGLG00100001580PABPC49983.201Heterocephalus_glaber_male
ENSAPOG00000001161pabpc410094.896ENSHCOG00000012694pabpc49996.278Hippocampus_comes
ENSAPOG00000001161pabpc49792.742ENSIPUG00000016620pabpc49992.652Ictalurus_punctatus
ENSAPOG00000001161pabpc410084.848ENSSTOG00000010416PABPC49984.628Ictidomys_tridecemlineatus
ENSAPOG00000001161pabpc410080.982ENSJJAG00000007781Pabpc49980.280Jaculus_jaculus
ENSAPOG00000001161pabpc49994.737ENSKMAG00000013597pabpc49995.477Kryptolebias_marmoratus
ENSAPOG00000001161pabpc410096.661ENSLBEG00000013654pabpc410096.661Labrus_bergylta
ENSAPOG00000001161pabpc49986.321ENSLACG00000011907PABPC49986.508Latimeria_chalumnae
ENSAPOG00000001161pabpc49991.339ENSLOCG00000001877pabpc49992.026Lepisosteus_oculatus
ENSAPOG00000001161pabpc410085.008ENSLAFG00000000151PABPC49984.790Loxodonta_africana
ENSAPOG00000001161pabpc410082.453ENSMFAG00000041481PABPC49983.360Macaca_fascicularis
ENSAPOG00000001161pabpc410080.269ENSMMUG00000007497PABPC49979.697Macaca_mulatta
ENSAPOG00000001161pabpc410082.453ENSMNEG00000043054PABPC49983.360Macaca_nemestrina
ENSAPOG00000001161pabpc410082.453ENSMLEG00000040716PABPC49983.360Mandrillus_leucophaeus
ENSAPOG00000001161pabpc410097.448ENSMAMG00000010025pabpc410097.448Mastacembelus_armatus
ENSAPOG00000001161pabpc410096.651ENSMZEG00005006141pabpc49996.926Maylandia_zebra
ENSAPOG00000001161pabpc49882.770ENSMGAG00000005408PABPC49982.253Meleagris_gallopavo
ENSAPOG00000001161pabpc45880.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSAPOG00000001161pabpc47278.571ENSMAUG00000001295-9777.619Mesocricetus_auratus
ENSAPOG00000001161pabpc47790.625ENSMAUG00000019763-8290.816Mesocricetus_auratus
ENSAPOG00000001161pabpc48884.810ENSMICG00000016633-10084.296Microcebus_murinus
ENSAPOG00000001161pabpc49974.776ENSMICG00000036729-9973.818Microcebus_murinus
ENSAPOG00000001161pabpc410084.051ENSMOCG00000006763Pabpc49884.091Microtus_ochrogaster
ENSAPOG00000001161pabpc410092.710ENSMMOG00000002363pabpc49993.031Mola_mola
ENSAPOG00000001161pabpc46070.933ENSMODG00000018051-9670.933Monodelphis_domestica
ENSAPOG00000001161pabpc49783.975ENSMODG00000017657-9983.206Monodelphis_domestica
ENSAPOG00000001161pabpc410097.138ENSMALG00000011017pabpc410097.138Monopterus_albus
ENSAPOG00000001161pabpc49971.088MGP_CAROLIEiJ_G0024864-9974.054Mus_caroli
ENSAPOG00000001161pabpc410079.372MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSAPOG00000001161pabpc410084.689ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSAPOG00000001161pabpc49979.848MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSAPOG00000001161pabpc49970.844MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSAPOG00000001161pabpc410079.821ENSMPUG00000014414-9979.394Mustela_putorius_furo
ENSAPOG00000001161pabpc49546.370ENSMPUG00000006836-10045.964Mustela_putorius_furo
ENSAPOG00000001161pabpc410084.689ENSMLUG00000012068PABPC49984.578Myotis_lucifugus
ENSAPOG00000001161pabpc410085.008ENSNGAG00000018292Pabpc49984.790Nannospalax_galili
ENSAPOG00000001161pabpc46098.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSAPOG00000001161pabpc46598.193ENSNBRG00000010047-7298.193Neolamprologus_brichardi
ENSAPOG00000001161pabpc410082.453ENSNLEG00000011928PABPC49983.360Nomascus_leucogenys
ENSAPOG00000001161pabpc48693.651ENSOPRG00000011984PABPC48793.651Ochotona_princeps
ENSAPOG00000001161pabpc49973.554ENSODEG00000017434-9973.941Octodon_degus
ENSAPOG00000001161pabpc410082.808ENSODEG00000006592-9982.726Octodon_degus
ENSAPOG00000001161pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSAPOG00000001161pabpc410096.651ENSONIG00000008176pabpc49996.926Oreochromis_niloticus
ENSAPOG00000001161pabpc49986.142ENSOANG00000010001PABPC49986.169Ornithorhynchus_anatinus
ENSAPOG00000001161pabpc49580.691ENSOCUG00000000562PABPC48879.435Oryctolagus_cuniculus
ENSAPOG00000001161pabpc49996.914ENSORLG00000017479pabpc49896.914Oryzias_latipes
ENSAPOG00000001161pabpc49996.914ENSORLG00020018644pabpc49896.914Oryzias_latipes_hni
ENSAPOG00000001161pabpc49996.914ENSORLG00015015042pabpc49896.914Oryzias_latipes_hsok
ENSAPOG00000001161pabpc49995.955ENSOMEG00000014410pabpc49895.955Oryzias_melastigma
ENSAPOG00000001161pabpc410081.098ENSOGAG00000004067PABPC49980.989Otolemur_garnettii
ENSAPOG00000001161pabpc410079.671ENSOARG00000020060PABPC49979.242Ovis_aries
ENSAPOG00000001161pabpc410082.298ENSPPAG00000043625PABPC49983.201Pan_paniscus
ENSAPOG00000001161pabpc410083.281ENSPPRG00000024727PABPC49983.043Panthera_pardus
ENSAPOG00000001161pabpc410083.281ENSPTIG00000005829PABPC49983.043Panthera_tigris_altaica
ENSAPOG00000001161pabpc410082.298ENSPTRG00000000573PABPC49983.201Pan_troglodytes
ENSAPOG00000001161pabpc410082.453ENSPANG00000009484PABPC49983.360Papio_anubis
ENSAPOG00000001161pabpc410090.752ENSPKIG00000025356pabpc49991.733Paramormyrops_kingsleyae
ENSAPOG00000001161pabpc49986.614ENSPSIG00000016892PABPC49986.645Pelodiscus_sinensis
ENSAPOG00000001161pabpc410092.332ENSPMGG00000009073pabpc49992.382Periophthalmus_magnuspinnatus
ENSAPOG00000001161pabpc410080.495ENSPEMG00000024193-9980.411Peromyscus_maniculatus_bairdii
ENSAPOG00000001161pabpc410083.075ENSPEMG00000023569-9983.943Peromyscus_maniculatus_bairdii
ENSAPOG00000001161pabpc48875.436ENSPMAG00000002836pabpc410076.132Petromyzon_marinus
ENSAPOG00000001161pabpc49574.370ENSPMAG00000007885pabpc49973.361Petromyzon_marinus
ENSAPOG00000001161pabpc49693.824ENSPCIG00000020674PABPC49994.417Phascolarctos_cinereus
ENSAPOG00000001161pabpc49996.006ENSPFOG00000002682pabpc410096.006Poecilia_formosa
ENSAPOG00000001161pabpc49996.166ENSPLAG00000010112pabpc410096.166Poecilia_latipinna
ENSAPOG00000001161pabpc49896.266ENSPMEG00000019739pabpc49995.955Poecilia_mexicana
ENSAPOG00000001161pabpc49996.006ENSPREG00000001589pabpc49996.440Poecilia_reticulata
ENSAPOG00000001161pabpc410080.120ENSPPYG00000001506PABPC49979.545Pongo_abelii
ENSAPOG00000001161pabpc410075.037ENSPCAG00000003341PABPC49974.545Procavia_capensis
ENSAPOG00000001161pabpc410082.326ENSPCOG00000023725-9983.228Propithecus_coquereli
ENSAPOG00000001161pabpc49969.213ENSPCOG00000025882-9869.213Propithecus_coquereli
ENSAPOG00000001161pabpc49878.477ENSPVAG00000002187PABPC49978.151Pteropus_vampyrus
ENSAPOG00000001161pabpc410096.810ENSPNYG00000006134pabpc49997.087Pundamilia_nyererei
ENSAPOG00000001161pabpc49993.502ENSPNAG00000024355pabpc49994.212Pygocentrus_nattereri
ENSAPOG00000001161pabpc410079.632ENSRNOG00000028592AABR07035074.19979.283Rattus_norvegicus
ENSAPOG00000001161pabpc410081.776ENSRNOG00000015642Pabpc49981.464Rattus_norvegicus
ENSAPOG00000001161pabpc410082.453ENSRBIG00000039761PABPC49983.360Rhinopithecus_bieti
ENSAPOG00000001161pabpc410082.453ENSRROG00000033355PABPC49983.360Rhinopithecus_roxellana
ENSAPOG00000001161pabpc410082.298ENSSBOG00000026193PABPC49983.201Saimiri_boliviensis_boliviensis
ENSAPOG00000001161pabpc49787.319ENSSHAG00000018139PABPC49986.486Sarcophilus_harrisii
ENSAPOG00000001161pabpc49990.850ENSSFOG00015023514pabpc49891.847Scleropages_formosus
ENSAPOG00000001161pabpc410096.651ENSSMAG00000009007pabpc410096.651Scophthalmus_maximus
ENSAPOG00000001161pabpc410097.448ENSSDUG00000012683pabpc410097.448Seriola_dumerili
ENSAPOG00000001161pabpc410097.448ENSSLDG00000013025pabpc410097.448Seriola_lalandi_dorsalis
ENSAPOG00000001161pabpc410073.543ENSSARG00000000310PABPC49973.030Sorex_araneus
ENSAPOG00000001161pabpc49986.804ENSSPUG00000003204PABPC49986.838Sphenodon_punctatus
ENSAPOG00000001161pabpc410098.246ENSSPAG00000009252pabpc410098.246Stegastes_partitus
ENSAPOG00000001161pabpc48844.723ENSSSCG00000036170-9544.946Sus_scrofa
ENSAPOG00000001161pabpc410082.866ENSSSCG00000003660-9983.043Sus_scrofa
ENSAPOG00000001161pabpc49981.654ENSTGUG00000001266PABPC49981.791Taeniopygia_guttata
ENSAPOG00000001161pabpc410094.577ENSTRUG00000005907pabpc49995.146Takifugu_rubripes
ENSAPOG00000001161pabpc410088.357ENSTNIG00000016902pabpc49988.673Tetraodon_nigroviridis
ENSAPOG00000001161pabpc49969.205ENSTBEG00000009035PABPC49968.571Tupaia_belangeri
ENSAPOG00000001161pabpc49962.147ENSTTRG00000014340PABPC49967.227Tursiops_truncatus
ENSAPOG00000001161pabpc410083.281ENSUAMG00000000303PABPC49983.043Ursus_americanus
ENSAPOG00000001161pabpc410089.342ENSUMAG00000019585PABPC49991.566Ursus_maritimus
ENSAPOG00000001161pabpc47070.206ENSVPAG00000010041PABPC47370.206Vicugna_pacos
ENSAPOG00000001161pabpc410083.281ENSVVUG00000005215PABPC49983.043Vulpes_vulpes
ENSAPOG00000001161pabpc49982.965ENSXETG00000010946pabpc49982.803Xenopus_tropicalis
ENSAPOG00000001161pabpc46896.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSAPOG00000001161pabpc49997.098ENSXCOG00000013190pabpc49695.755Xiphophorus_couchianus
ENSAPOG00000001161pabpc49995.847ENSXMAG00000019007pabpc49996.278Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us