EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000001298 (Gene tree)
Gene ID: 110954745
Gene Symbol: slirp
Alias: sb:cb657|si:ch73-276n11.1
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 4232 bases
Position: chrMVNR01000368.1:359045-363276
Accession: 110954745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000000135	RRM_1	PF00076.22	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000017383	-	692	XM_022199422	ENSAPOP00000000135	100 (aa)	XP_022055114	UPI000B8FFAB7

Gene Model

Click here to download ENSAPOG00000001298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000001298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000001298	slirp	83	31.507	ENSAPOG00000016726	-	53	31.507
ENSAPOG00000001298	slirp	79	31.646	ENSAPOG00000003364	HNRNPA0	51	31.646

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000001298	slirp	88	48.864	ENSG00000119705	SLIRP	92	57.143	Homo_sapiens
ENSAPOG00000001298	slirp	70	57.143	ENSAMEG00000003975	SLIRP	77	57.143	Ailuropoda_melanoleuca
ENSAPOG00000001298	slirp	98	82.653	ENSACIG00000023083	slirp	97	82.653	Amphilophus_citrinellus
ENSAPOG00000001298	slirp	98	87.755	ENSAOCG00000006342	slirp	99	87.755	Amphiprion_ocellaris
ENSAPOG00000001298	slirp	98	87.755	ENSAPEG00000015917	slirp	99	87.755	Amphiprion_percula
ENSAPOG00000001298	slirp	97	87.629	ENSAPEG00000015719	-	99	87.629	Amphiprion_percula
ENSAPOG00000001298	slirp	100	75.000	ENSATEG00000013525	slirp	100	75.000	Anabas_testudineus
ENSAPOG00000001298	slirp	98	65.306	ENSAMXG00000018693	slirp	98	65.306	Astyanax_mexicanus
ENSAPOG00000001298	slirp	74	59.459	ENSCJAG00000016946	SLIRP	72	58.209	Callithrix_jacchus
ENSAPOG00000001298	slirp	88	52.222	ENSCAFG00020015876	-	81	52.222	Canis_lupus_dingo
ENSAPOG00000001298	slirp	74	58.108	ENSCCAG00000030130	SLIRP	69	58.108	Cebus_capucinus
ENSAPOG00000001298	slirp	76	56.579	ENSCATG00000036327	SLIRP	72	58.209	Cercocebus_atys
ENSAPOG00000001298	slirp	71	59.155	ENSCSAG00000011736	SLIRP	68	56.757	Chlorocebus_sabaeus
ENSAPOG00000001298	slirp	81	60.494	ENSCPBG00000026327	SLIRP	82	60.494	Chrysemys_picta_bellii
ENSAPOG00000001298	slirp	67	61.194	ENSCANG00000032892	SLIRP	68	61.194	Colobus_angolensis_palliatus
ENSAPOG00000001298	slirp	71	54.930	ENSCGRG00001024068	Slirp	64	54.930	Cricetulus_griseus_chok1gshd
ENSAPOG00000001298	slirp	71	54.930	ENSCGRG00000017440	Slirp	64	54.930	Cricetulus_griseus_crigri
ENSAPOG00000001298	slirp	84	61.905	ENSCSEG00000015766	slirp	86	61.905	Cynoglossus_semilaevis
ENSAPOG00000001298	slirp	90	76.667	ENSCVAG00000012504	slirp	86	76.667	Cyprinodon_variegatus
ENSAPOG00000001298	slirp	94	74.468	ENSDARG00000097753	slirp	94	74.227	Danio_rerio
ENSAPOG00000001298	slirp	74	51.351	ENSDNOG00000007721	SLIRP	67	51.351	Dasypus_novemcinctus
ENSAPOG00000001298	slirp	88	50.562	ENSDORG00000012379	Slirp	80	50.562	Dipodomys_ordii
ENSAPOG00000001298	slirp	75	52.000	ENSETEG00000010345	SLIRP	69	52.000	Echinops_telfairi
ENSAPOG00000001298	slirp	74	60.811	ENSEASG00005020193	SLIRP	67	60.811	Equus_asinus_asinus
ENSAPOG00000001298	slirp	71	56.338	ENSEEUG00000007257	SLIRP	70	56.338	Erinaceus_europaeus
ENSAPOG00000001298	slirp	96	76.042	ENSELUG00000016800	slirp	95	76.042	Esox_lucius
ENSAPOG00000001298	slirp	67	61.194	ENSFCAG00000036326	SLIRP	68	61.194	Felis_catus
ENSAPOG00000001298	slirp	78	56.410	ENSFALG00000012583	SLIRP	85	52.222	Ficedula_albicollis
ENSAPOG00000001298	slirp	74	56.757	ENSFDAG00000008347	SLIRP	65	56.757	Fukomys_damarensis
ENSAPOG00000001298	slirp	78	78.205	ENSFHEG00000004709	slirp	85	78.205	Fundulus_heteroclitus
ENSAPOG00000001298	slirp	97	72.165	ENSGMOG00000016948	slirp	93	72.165	Gadus_morhua
ENSAPOG00000001298	slirp	89	52.809	ENSGALG00000031238	SLIRP	86	52.809	Gallus_gallus
ENSAPOG00000001298	slirp	100	77.000	ENSGAFG00000010998	slirp	100	77.000	Gambusia_affinis
ENSAPOG00000001298	slirp	82	81.707	ENSGACG00000020137	slirp	95	81.707	Gasterosteus_aculeatus
ENSAPOG00000001298	slirp	98	61.616	ENSGAGG00000009953	SLIRP	68	61.616	Gopherus_agassizii
ENSAPOG00000001298	slirp	88	48.864	ENSGGOG00000011059	-	72	58.209	Gorilla_gorilla
ENSAPOG00000001298	slirp	71	54.930	ENSHGLG00000018491	SLIRP	64	54.930	Heterocephalus_glaber_female
ENSAPOG00000001298	slirp	71	54.930	ENSHGLG00100014153	SLIRP	64	54.930	Heterocephalus_glaber_male
ENSAPOG00000001298	slirp	95	80.000	ENSHCOG00000006795	slirp	96	80.000	Hippocampus_comes
ENSAPOG00000001298	slirp	98	76.531	ENSIPUG00000010214	SLIRP	98	76.531	Ictalurus_punctatus
ENSAPOG00000001298	slirp	75	56.000	ENSSTOG00000034316	SLIRP	68	56.000	Ictidomys_tridecemlineatus
ENSAPOG00000001298	slirp	100	67.000	ENSKMAG00000002038	slirp	96	67.000	Kryptolebias_marmoratus
ENSAPOG00000001298	slirp	100	70.000	ENSLBEG00000007564	slirp	100	70.000	Labrus_bergylta
ENSAPOG00000001298	slirp	97	72.165	ENSLACG00000013434	SLIRP	93	72.165	Latimeria_chalumnae
ENSAPOG00000001298	slirp	74	56.757	ENSMFAG00000042960	SLIRP	72	58.209	Macaca_fascicularis
ENSAPOG00000001298	slirp	83	54.217	ENSMMUG00000029256	SLIRP	72	58.209	Macaca_mulatta
ENSAPOG00000001298	slirp	74	56.757	ENSMNEG00000028921	SLIRP	72	58.209	Macaca_nemestrina
ENSAPOG00000001298	slirp	67	58.209	ENSMLEG00000043644	SLIRP	68	58.209	Mandrillus_leucophaeus
ENSAPOG00000001298	slirp	98	84.694	ENSMZEG00005004617	slirp	99	84.694	Maylandia_zebra
ENSAPOG00000001298	slirp	89	47.191	ENSMAUG00000003857	Slirp	80	47.191	Mesocricetus_auratus
ENSAPOG00000001298	slirp	70	60.000	ENSMICG00000012080	SLIRP	65	60.000	Microcebus_murinus
ENSAPOG00000001298	slirp	71	57.746	ENSMOCG00000016019	Slirp	69	55.714	Microtus_ochrogaster
ENSAPOG00000001298	slirp	100	82.000	ENSMMOG00000018268	slirp	100	82.000	Mola_mola
ENSAPOG00000001298	slirp	70	54.286	ENSMODG00000005207	-	99	54.286	Monodelphis_domestica
ENSAPOG00000001298	slirp	100	73.000	ENSMALG00000012581	slirp	100	73.000	Monopterus_albus
ENSAPOG00000001298	slirp	74	56.757	MGP_CAROLIEiJ_G0017995	Slirp	69	56.757	Mus_caroli
ENSAPOG00000001298	slirp	74	56.757	ENSMUSG00000021040	Slirp	71	55.714	Mus_musculus
ENSAPOG00000001298	slirp	74	56.757	MGP_SPRETEiJ_G0018840	Slirp	66	56.757	Mus_spretus
ENSAPOG00000001298	slirp	95	51.042	ENSMLUG00000029544	-	85	51.042	Myotis_lucifugus
ENSAPOG00000001298	slirp	73	60.274	ENSMLUG00000024998	-	74	55.952	Myotis_lucifugus
ENSAPOG00000001298	slirp	74	54.054	ENSNGAG00000016363	Slirp	71	54.054	Nannospalax_galili
ENSAPOG00000001298	slirp	89	43.820	ENSNLEG00000032459	-	82	43.820	Nomascus_leucogenys
ENSAPOG00000001298	slirp	89	43.820	ENSNLEG00000027238	-	80	51.429	Nomascus_leucogenys
ENSAPOG00000001298	slirp	76	56.579	ENSODEG00000012580	SLIRP	76	55.714	Octodon_degus
ENSAPOG00000001298	slirp	98	83.673	ENSONIG00000011692	slirp	99	83.673	Oreochromis_niloticus
ENSAPOG00000001298	slirp	75	60.000	ENSOANG00000022366	SLIRP	68	60.000	Ornithorhynchus_anatinus
ENSAPOG00000001298	slirp	100	82.000	ENSORLG00000010761	slirp	78	82.000	Oryzias_latipes
ENSAPOG00000001298	slirp	100	81.000	ENSORLG00020022188	slirp	100	81.000	Oryzias_latipes_hni
ENSAPOG00000001298	slirp	99	81.818	ENSORLG00015020171	slirp	98	81.818	Oryzias_latipes_hsok
ENSAPOG00000001298	slirp	100	80.000	ENSOMEG00000019321	slirp	100	80.000	Oryzias_melastigma
ENSAPOG00000001298	slirp	85	55.294	ENSPPAG00000040710	-	77	55.294	Pan_paniscus
ENSAPOG00000001298	slirp	67	61.194	ENSPPRG00000014350	SLIRP	68	61.194	Panthera_pardus
ENSAPOG00000001298	slirp	67	61.194	ENSPTIG00000014196	SLIRP	68	61.194	Panthera_tigris_altaica
ENSAPOG00000001298	slirp	78	55.128	ENSPTRG00000030691	SLIRP	72	58.209	Pan_troglodytes
ENSAPOG00000001298	slirp	74	58.108	ENSPANG00000026323	SLIRP	72	59.701	Papio_anubis
ENSAPOG00000001298	slirp	69	65.217	ENSPKIG00000008831	slirp	68	65.217	Paramormyrops_kingsleyae
ENSAPOG00000001298	slirp	80	77.500	ENSPMGG00000010541	slirp	92	77.500	Periophthalmus_magnuspinnatus
ENSAPOG00000001298	slirp	71	54.930	ENSPEMG00000013234	Slirp	69	52.857	Peromyscus_maniculatus_bairdii
ENSAPOG00000001298	slirp	85	52.941	ENSPMAG00000009355	slirp	94	52.941	Petromyzon_marinus
ENSAPOG00000001298	slirp	79	46.835	ENSPCIG00000026842	-	85	46.835	Phascolarctos_cinereus
ENSAPOG00000001298	slirp	99	76.768	ENSPFOG00000006758	slirp	99	76.768	Poecilia_formosa
ENSAPOG00000001298	slirp	99	76.768	ENSPLAG00000011140	slirp	99	76.768	Poecilia_latipinna
ENSAPOG00000001298	slirp	99	76.768	ENSPMEG00000019535	slirp	99	76.768	Poecilia_mexicana
ENSAPOG00000001298	slirp	99	77.778	ENSPREG00000011673	slirp	99	77.778	Poecilia_reticulata
ENSAPOG00000001298	slirp	74	59.459	ENSPPYG00000006030	SLIRP	68	59.459	Pongo_abelii
ENSAPOG00000001298	slirp	76	56.579	ENSPCOG00000015159	SLIRP	66	56.579	Propithecus_coquereli
ENSAPOG00000001298	slirp	98	79.592	ENSPNAG00000008633	slirp	99	79.592	Pygocentrus_nattereri
ENSAPOG00000001298	slirp	65	61.538	ENSRBIG00000031396	-	65	61.538	Rhinopithecus_bieti
ENSAPOG00000001298	slirp	74	54.054	ENSRBIG00000035817	-	68	54.054	Rhinopithecus_bieti
ENSAPOG00000001298	slirp	67	58.209	ENSRBIG00000032998	-	62	58.209	Rhinopithecus_bieti
ENSAPOG00000001298	slirp	88	53.409	ENSRBIG00000032222	-	81	53.409	Rhinopithecus_bieti
ENSAPOG00000001298	slirp	67	59.701	ENSRROG00000017133	-	70	59.701	Rhinopithecus_roxellana
ENSAPOG00000001298	slirp	65	63.077	ENSRROG00000035604	-	65	63.077	Rhinopithecus_roxellana
ENSAPOG00000001298	slirp	71	60.563	ENSRROG00000041312	-	70	60.563	Rhinopithecus_roxellana
ENSAPOG00000001298	slirp	88	53.409	ENSRROG00000036656	-	81	53.409	Rhinopithecus_roxellana
ENSAPOG00000001298	slirp	73	56.164	ENSSBOG00000020014	SLIRP	72	59.701	Saimiri_boliviensis_boliviensis
ENSAPOG00000001298	slirp	98	64.286	ENSSFOG00015011165	slirp	98	64.286	Scleropages_formosus
ENSAPOG00000001298	slirp	100	52.941	ENSSMAG00000012930	slirp	100	52.941	Scophthalmus_maximus
ENSAPOG00000001298	slirp	100	83.000	ENSSDUG00000021883	slirp	66	83.000	Seriola_dumerili
ENSAPOG00000001298	slirp	100	83.000	ENSSLDG00000023136	slirp	91	83.000	Seriola_lalandi_dorsalis
ENSAPOG00000001298	slirp	86	57.955	ENSSPUG00000009346	SLIRP	90	57.955	Sphenodon_punctatus
ENSAPOG00000001298	slirp	100	75.000	ENSSPAG00000013477	slirp	100	75.000	Stegastes_partitus
ENSAPOG00000001298	slirp	75	58.667	ENSSSCG00000028167	SLIRP	68	58.667	Sus_scrofa
ENSAPOG00000001298	slirp	78	55.128	ENSTGUG00000012337	SLIRP	83	51.136	Taeniopygia_guttata
ENSAPOG00000001298	slirp	98	72.727	ENSTRUG00000020127	slirp	98	72.727	Takifugu_rubripes
ENSAPOG00000001298	slirp	76	61.842	ENSUAMG00000022445	SLIRP	68	61.842	Ursus_americanus
ENSAPOG00000001298	slirp	76	61.842	ENSUMAG00000007166	SLIRP	68	61.842	Ursus_maritimus
ENSAPOG00000001298	slirp	88	50.000	ENSVPAG00000001781	SLIRP	81	50.000	Vicugna_pacos
ENSAPOG00000001298	slirp	76	59.211	ENSVVUG00000004436	SLIRP	68	59.211	Vulpes_vulpes
ENSAPOG00000001298	slirp	81	69.136	ENSXETG00000030343	SLIRP	91	69.136	Xenopus_tropicalis
ENSAPOG00000001298	slirp	100	77.000	ENSXCOG00000009422	slirp	100	77.000	Xiphophorus_couchianus
ENSAPOG00000001298	slirp	100	79.000	ENSXMAG00000015655	slirp	100	79.000	Xiphophorus_maculatus