EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000001539 (Gene tree)
Gene ID: 110955357
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 21832 bases
Position: chrMVNR01000399.1:449243-471074
Accession: 110955357
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000000330	ResIII	PF04851.15	4.1e-11	1	1
ENSAPOP00000000340	ResIII	PF04851.15	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000017053	-	2622	-	ENSAPOP00000000330	873 (aa)	-	-
ENSAPOT00000017041	-	5012	XM_022200316	ENSAPOP00000000340	995 (aa)	XP_022056008	-

Gene Model

Click here to download ENSAPOG00000001539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000001539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000001539	chd1l	51	33.676	ENSAPOG00000011392	ercc6l	75	33.537
ENSAPOG00000001539	chd1l	54	30.843	ENSAPOG00000011643	rad54l	69	31.034
ENSAPOG00000001539	chd1l	62	42.000	ENSAPOG00000016035	smarca5	64	39.733
ENSAPOG00000001539	chd1l	55	39.107	ENSAPOG00000007707	hells	73	39.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000001539	chd1l	97	64.720	ENSG00000131778	CHD1L	98	65.296	Homo_sapiens
ENSAPOG00000001539	chd1l	99	64.538	ENSAMEG00000017063	CHD1L	97	64.147	Ailuropoda_melanoleuca
ENSAPOG00000001539	chd1l	97	87.662	ENSACIG00000001164	chd1l	99	87.185	Amphilophus_citrinellus
ENSAPOG00000001539	chd1l	99	95.991	ENSAOCG00000014510	chd1l	98	95.775	Amphiprion_ocellaris
ENSAPOG00000001539	chd1l	100	92.018	ENSAPEG00000017573	chd1l	96	92.132	Amphiprion_percula
ENSAPOG00000001539	chd1l	99	92.105	ENSAPEG00000017450	chd1l	96	92.105	Amphiprion_percula
ENSAPOG00000001539	chd1l	99	88.106	ENSATEG00000013058	chd1l	97	85.873	Anabas_testudineus
ENSAPOG00000001539	chd1l	96	64.209	ENSAPLG00000009976	CHD1L	94	63.967	Anas_platyrhynchos
ENSAPOG00000001539	chd1l	96	62.716	ENSACAG00000017686	CHD1L	95	62.963	Anolis_carolinensis
ENSAPOG00000001539	chd1l	97	64.947	ENSANAG00000024347	CHD1L	96	63.783	Aotus_nancymaae
ENSAPOG00000001539	chd1l	99	88.568	ENSACLG00000019304	chd1l	96	86.897	Astatotilapia_calliptera
ENSAPOG00000001539	chd1l	99	65.940	ENSAMXG00000012367	chd1l	97	62.045	Astyanax_mexicanus
ENSAPOG00000001539	chd1l	99	65.585	ENSBTAG00000020831	CHD1L	96	65.238	Bos_taurus
ENSAPOG00000001539	chd1l	98	64.302	ENSCJAG00000002406	CHD1L	96	63.552	Callithrix_jacchus
ENSAPOG00000001539	chd1l	99	61.856	ENSCAFG00000010944	CHD1L	95	61.717	Canis_familiaris
ENSAPOG00000001539	chd1l	99	63.584	ENSCAFG00020020121	CHD1L	97	63.540	Canis_lupus_dingo
ENSAPOG00000001539	chd1l	99	65.701	ENSCHIG00000013871	CHD1L	96	65.353	Capra_hircus
ENSAPOG00000001539	chd1l	96	65.558	ENSTSYG00000003005	CHD1L	99	64.615	Carlito_syrichta
ENSAPOG00000001539	chd1l	98	62.341	ENSCPOG00000009000	CHD1L	96	62.109	Cavia_porcellus
ENSAPOG00000001539	chd1l	98	62.326	ENSCCAG00000036079	CHD1L	96	61.592	Cebus_capucinus
ENSAPOG00000001539	chd1l	98	64.651	ENSCATG00000031044	CHD1L	96	64.014	Cercocebus_atys
ENSAPOG00000001539	chd1l	98	64.535	ENSCLAG00000000880	CHD1L	96	64.535	Chinchilla_lanigera
ENSAPOG00000001539	chd1l	98	64.767	ENSCSAG00000018386	CHD1L	96	64.352	Chlorocebus_sabaeus
ENSAPOG00000001539	chd1l	96	66.431	ENSCPBG00000002600	CHD1L	95	66.313	Chrysemys_picta_bellii
ENSAPOG00000001539	chd1l	98	63.657	ENSCANG00000020239	CHD1L	96	63.310	Colobus_angolensis_palliatus
ENSAPOG00000001539	chd1l	97	65.541	ENSCGRG00001021624	Chd1l	96	64.610	Cricetulus_griseus_chok1gshd
ENSAPOG00000001539	chd1l	94	65.986	ENSCGRG00000007554	Chd1l	99	64.151	Cricetulus_griseus_crigri
ENSAPOG00000001539	chd1l	99	83.986	ENSCVAG00000002595	chd1l	94	82.557	Cyprinodon_variegatus
ENSAPOG00000001539	chd1l	99	74.338	ENSDARG00000015471	chd1l	97	71.169	Danio_rerio
ENSAPOG00000001539	chd1l	98	64.931	ENSDNOG00000019504	CHD1L	95	64.385	Dasypus_novemcinctus
ENSAPOG00000001539	chd1l	97	64.195	ENSDORG00000013555	Chd1l	96	64.037	Dipodomys_ordii
ENSAPOG00000001539	chd1l	90	61.717	ENSETEG00000008445	CHD1L	88	61.002	Echinops_telfairi
ENSAPOG00000001539	chd1l	67	73.913	ENSEBUG00000005791	chd1l	73	73.913	Eptatretus_burgeri
ENSAPOG00000001539	chd1l	99	64.781	ENSEASG00005007364	CHD1L	99	65.068	Equus_asinus_asinus
ENSAPOG00000001539	chd1l	99	64.665	ENSECAG00000008915	CHD1L	99	64.945	Equus_caballus
ENSAPOG00000001539	chd1l	99	63.835	ENSELUG00000016844	chd1l	97	62.038	Esox_lucius
ENSAPOG00000001539	chd1l	97	64.103	ENSFCAG00000007777	CHD1L	97	63.356	Felis_catus
ENSAPOG00000001539	chd1l	99	62.184	ENSFALG00000006087	CHD1L	96	62.414	Ficedula_albicollis
ENSAPOG00000001539	chd1l	96	65.476	ENSFDAG00000012431	CHD1L	99	65.130	Fukomys_damarensis
ENSAPOG00000001539	chd1l	99	85.284	ENSFHEG00000012420	chd1l	97	82.957	Fundulus_heteroclitus
ENSAPOG00000001539	chd1l	96	64.547	ENSGALG00000015038	CHD1L	94	64.429	Gallus_gallus
ENSAPOG00000001539	chd1l	99	84.271	ENSGAFG00000018198	chd1l	97	82.139	Gambusia_affinis
ENSAPOG00000001539	chd1l	59	85.547	ENSGACG00000014042	chd1l	98	85.547	Gasterosteus_aculeatus
ENSAPOG00000001539	chd1l	99	65.367	ENSGAGG00000014432	CHD1L	99	65.023	Gopherus_agassizii
ENSAPOG00000001539	chd1l	97	64.094	ENSGGOG00000001067	CHD1L	95	63.986	Gorilla_gorilla
ENSAPOG00000001539	chd1l	99	88.684	ENSHBUG00000007464	chd1l	99	86.508	Haplochromis_burtoni
ENSAPOG00000001539	chd1l	97	63.817	ENSHGLG00000008933	CHD1L	95	63.817	Heterocephalus_glaber_female
ENSAPOG00000001539	chd1l	94	62.754	ENSHGLG00100007155	CHD1L	98	62.143	Heterocephalus_glaber_male
ENSAPOG00000001539	chd1l	96	78.235	ENSHCOG00000012787	chd1l	93	78.538	Hippocampus_comes
ENSAPOG00000001539	chd1l	99	68.614	ENSIPUG00000022617	chd1l	97	66.332	Ictalurus_punctatus
ENSAPOG00000001539	chd1l	98	58.824	ENSSTOG00000007032	CHD1L	96	58.803	Ictidomys_tridecemlineatus
ENSAPOG00000001539	chd1l	99	85.665	ENSKMAG00000014358	chd1l	98	83.066	Kryptolebias_marmoratus
ENSAPOG00000001539	chd1l	99	85.155	ENSLBEG00000023845	chd1l	97	84.311	Labrus_bergylta
ENSAPOG00000001539	chd1l	98	61.124	ENSLACG00000006262	CHD1L	98	58.876	Latimeria_chalumnae
ENSAPOG00000001539	chd1l	99	73.410	ENSLOCG00000010574	chd1l	97	70.415	Lepisosteus_oculatus
ENSAPOG00000001539	chd1l	96	64.906	ENSLAFG00000018136	CHD1L	99	64.118	Loxodonta_africana
ENSAPOG00000001539	chd1l	96	64.294	ENSMFAG00000043562	CHD1L	99	64.548	Macaca_fascicularis
ENSAPOG00000001539	chd1l	98	64.767	ENSMMUG00000009024	CHD1L	96	64.129	Macaca_mulatta
ENSAPOG00000001539	chd1l	98	64.767	ENSMNEG00000039905	CHD1L	96	64.129	Macaca_nemestrina
ENSAPOG00000001539	chd1l	98	64.767	ENSMLEG00000030900	CHD1L	96	64.129	Mandrillus_leucophaeus
ENSAPOG00000001539	chd1l	99	86.982	ENSMAMG00000012822	chd1l	100	84.567	Mastacembelus_armatus
ENSAPOG00000001539	chd1l	99	88.684	ENSMZEG00005020830	chd1l	92	87.486	Maylandia_zebra
ENSAPOG00000001539	chd1l	95	63.876	ENSMGAG00000014304	CHD1L	99	63.604	Meleagris_gallopavo
ENSAPOG00000001539	chd1l	99	64.719	ENSMICG00000002497	CHD1L	96	64.524	Microcebus_murinus
ENSAPOG00000001539	chd1l	98	65.017	ENSMOCG00000006305	Chd1l	96	64.815	Microtus_ochrogaster
ENSAPOG00000001539	chd1l	99	78.107	ENSMMOG00000005964	chd1l	92	77.114	Mola_mola
ENSAPOG00000001539	chd1l	96	64.671	ENSMODG00000018717	CHD1L	95	64.671	Monodelphis_domestica
ENSAPOG00000001539	chd1l	99	89.492	ENSMALG00000014675	chd1l	97	87.120	Monopterus_albus
ENSAPOG00000001539	chd1l	98	64.925	MGP_CAROLIEiJ_G0025401	Chd1l	96	64.953	Mus_caroli
ENSAPOG00000001539	chd1l	98	64.747	ENSMUSG00000028089	Chd1l	96	64.631	Mus_musculus
ENSAPOG00000001539	chd1l	98	65.233	MGP_PahariEiJ_G0026845	Chd1l	96	65.000	Mus_pahari
ENSAPOG00000001539	chd1l	98	65.157	MGP_SPRETEiJ_G0026347	Chd1l	96	64.808	Mus_spretus
ENSAPOG00000001539	chd1l	99	64.351	ENSMPUG00000000615	CHD1L	97	64.351	Mustela_putorius_furo
ENSAPOG00000001539	chd1l	96	64.754	ENSMLUG00000007573	CHD1L	95	63.699	Myotis_lucifugus
ENSAPOG00000001539	chd1l	97	60.508	ENSNGAG00000000908	Chd1l	98	60.532	Nannospalax_galili
ENSAPOG00000001539	chd1l	99	84.518	ENSNBRG00000006021	chd1l	95	84.518	Neolamprologus_brichardi
ENSAPOG00000001539	chd1l	98	63.395	ENSNLEG00000000179	CHD1L	96	63.061	Nomascus_leucogenys
ENSAPOG00000001539	chd1l	96	54.941	ENSOPRG00000006973	CHD1L	99	54.900	Ochotona_princeps
ENSAPOG00000001539	chd1l	98	60.323	ENSODEG00000002494	CHD1L	96	60.299	Octodon_degus
ENSAPOG00000001539	chd1l	99	89.261	ENSONIG00000003183	chd1l	97	87.172	Oreochromis_niloticus
ENSAPOG00000001539	chd1l	87	62.661	ENSOANG00000003068	CHD1L	92	62.403	Ornithorhynchus_anatinus
ENSAPOG00000001539	chd1l	98	61.959	ENSOCUG00000009336	CHD1L	96	60.978	Oryctolagus_cuniculus
ENSAPOG00000001539	chd1l	99	82.135	ENSORLG00000003673	chd1l	95	81.787	Oryzias_latipes
ENSAPOG00000001539	chd1l	99	82.609	ENSORLG00020005123	chd1l	99	80.286	Oryzias_latipes_hni
ENSAPOG00000001539	chd1l	99	82.039	ENSORLG00015001680	chd1l	98	81.692	Oryzias_latipes_hsok
ENSAPOG00000001539	chd1l	79	83.871	ENSOMEG00000006109	chd1l	92	83.871	Oryzias_melastigma
ENSAPOG00000001539	chd1l	98	64.509	ENSOGAG00000008775	CHD1L	96	63.699	Otolemur_garnettii
ENSAPOG00000001539	chd1l	99	64.989	ENSOARG00000020547	CHD1L	98	66.110	Ovis_aries
ENSAPOG00000001539	chd1l	96	64.303	ENSPPAG00000039193	CHD1L	99	64.504	Pan_paniscus
ENSAPOG00000001539	chd1l	96	65.253	ENSPPRG00000010258	CHD1L	96	63.982	Panthera_pardus
ENSAPOG00000001539	chd1l	97	64.603	ENSPTRG00000001220	CHD1L	95	64.261	Pan_troglodytes
ENSAPOG00000001539	chd1l	97	65.064	ENSPANG00000009170	CHD1L	96	64.129	Papio_anubis
ENSAPOG00000001539	chd1l	99	73.264	ENSPKIG00000022166	chd1l	97	71.084	Paramormyrops_kingsleyae
ENSAPOG00000001539	chd1l	96	65.724	ENSPSIG00000012595	CHD1L	94	65.253	Pelodiscus_sinensis
ENSAPOG00000001539	chd1l	98	63.261	ENSPEMG00000013528	Chd1l	96	62.916	Peromyscus_maniculatus_bairdii
ENSAPOG00000001539	chd1l	92	64.888	ENSPCIG00000030409	CHD1L	98	64.488	Phascolarctos_cinereus
ENSAPOG00000001539	chd1l	99	83.429	ENSPFOG00000015948	chd1l	97	81.901	Poecilia_formosa
ENSAPOG00000001539	chd1l	99	84.060	ENSPLAG00000015145	chd1l	97	82.664	Poecilia_latipinna
ENSAPOG00000001539	chd1l	99	83.622	ENSPMEG00000008720	chd1l	96	82.646	Poecilia_mexicana
ENSAPOG00000001539	chd1l	99	82.414	ENSPREG00000017885	chd1l	98	81.954	Poecilia_reticulata
ENSAPOG00000001539	chd1l	99	64.319	ENSPPYG00000000946	CHD1L	96	63.982	Pongo_abelii
ENSAPOG00000001539	chd1l	93	58.049	ENSPCAG00000005959	CHD1L	91	57.767	Procavia_capensis
ENSAPOG00000001539	chd1l	95	61.372	ENSPVAG00000006084	CHD1L	99	60.308	Pteropus_vampyrus
ENSAPOG00000001539	chd1l	99	86.932	ENSPNYG00000013001	chd1l	98	86.735	Pundamilia_nyererei
ENSAPOG00000001539	chd1l	99	73.714	ENSPNAG00000011881	chd1l	97	70.330	Pygocentrus_nattereri
ENSAPOG00000001539	chd1l	98	64.631	ENSRNOG00000017669	Chd1l	96	64.747	Rattus_norvegicus
ENSAPOG00000001539	chd1l	98	63.689	ENSRBIG00000041272	CHD1L	95	63.341	Rhinopithecus_bieti
ENSAPOG00000001539	chd1l	97	64.094	ENSRROG00000041354	CHD1L	96	63.743	Rhinopithecus_roxellana
ENSAPOG00000001539	chd1l	96	63.991	ENSSHAG00000017395	CHD1L	94	64.252	Sarcophilus_harrisii
ENSAPOG00000001539	chd1l	99	72.654	ENSSFOG00015003649	chd1l	98	71.165	Scleropages_formosus
ENSAPOG00000001539	chd1l	99	84.265	ENSSMAG00000019377	chd1l	97	83.030	Scophthalmus_maximus
ENSAPOG00000001539	chd1l	97	87.603	ENSSDUG00000019831	chd1l	95	87.886	Seriola_dumerili
ENSAPOG00000001539	chd1l	97	87.324	ENSSLDG00000012714	chd1l	95	87.324	Seriola_lalandi_dorsalis
ENSAPOG00000001539	chd1l	97	62.761	ENSSPUG00000016865	CHD1L	96	62.804	Sphenodon_punctatus
ENSAPOG00000001539	chd1l	99	93.950	ENSSPAG00000017653	chd1l	98	93.555	Stegastes_partitus
ENSAPOG00000001539	chd1l	99	62.989	ENSSSCG00000006701	CHD1L	97	62.644	Sus_scrofa
ENSAPOG00000001539	chd1l	96	64.075	ENSTGUG00000013392	-	98	63.967	Taeniopygia_guttata
ENSAPOG00000001539	chd1l	96	71.108	ENSTNIG00000004902	chd1l	99	70.918	Tetraodon_nigroviridis
ENSAPOG00000001539	chd1l	96	62.322	ENSTTRG00000011711	CHD1L	99	61.792	Tursiops_truncatus
ENSAPOG00000001539	chd1l	99	64.424	ENSUAMG00000021991	CHD1L	96	65.398	Ursus_americanus
ENSAPOG00000001539	chd1l	99	64.310	ENSUMAG00000009733	CHD1L	96	65.509	Ursus_maritimus
ENSAPOG00000001539	chd1l	99	63.688	ENSVVUG00000007316	CHD1L	92	63.001	Vulpes_vulpes
ENSAPOG00000001539	chd1l	99	80.277	ENSXCOG00000008336	chd1l	95	77.847	Xiphophorus_couchianus
ENSAPOG00000001539	chd1l	99	84.180	ENSXMAG00000015898	chd1l	97	82.472	Xiphophorus_maculatus