EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAPOG00000001713 (Gene tree)
Gene ID
110954708
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Acanthochromis_polyacanthus
Status
putative
Strand
Plus strand
Length
8540 bases
Position
chrMVNR01000366.1:26567-35106
Accession
110954708
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAPOP00000021286RRM_1PF00076.221.4e-4412
ENSAPOP00000021286RRM_1PF00076.221.4e-4422
ENSAPOP00000000489RRM_1PF00076.221.7e-4412
ENSAPOP00000000489RRM_1PF00076.221.7e-4422
ENSAPOP00000000508RRM_1PF00076.221.7e-4412
ENSAPOP00000000508RRM_1PF00076.221.7e-4422
ENSAPOP00000000498RRM_1PF00076.222.7e-3812
ENSAPOP00000000498RRM_1PF00076.222.7e-3822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAPOT00000016745-3082XM_022199370ENSAPOP00000000508526 (aa)XP_022055062-
ENSAPOT00000016758-3031XM_022199374ENSAPOP00000021286509 (aa)XP_022055066-
ENSAPOT00000016777-2213XM_022199368ENSAPOP00000000489526 (aa)XP_022055060UPI000B8F8932
ENSAPOT00000016764-2401-ENSAPOP00000000498517 (aa)--
Gene Model
Click here to download ENSAPOG00000001713's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000001713's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAPOG00000001713puf60b5338.235ENSAPOG00000002208-6238.235
ENSAPOG00000001713puf60b5335.294ENSAPOG00000023155u2af2a8437.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAPOG00000001713puf60b9985.417ENSG00000179950PUF6010086.180Homo_sapiens
ENSAPOG00000001713puf60b9983.523ENSAMEG00000006406PUF609483.333Ailuropoda_melanoleuca
ENSAPOG00000001713puf60b9897.856ENSACIG00000021705puf60b10097.856Amphilophus_citrinellus
ENSAPOG00000001713puf60b9878.016ENSACIG00000003263-9978.252Amphilophus_citrinellus
ENSAPOG00000001713puf60b10083.112ENSAOCG00000015558-10083.681Amphiprion_ocellaris
ENSAPOG00000001713puf60b100100.000ENSAOCG00000005395puf60b100100.000Amphiprion_ocellaris
ENSAPOG00000001713puf60b9777.555ENSAPEG00000001836-9977.909Amphiprion_percula
ENSAPOG00000001713puf60b10097.642ENSAPEG00000011923puf60b10097.642Amphiprion_percula
ENSAPOG00000001713puf60b10098.289ENSATEG00000001730puf60b10098.289Anabas_testudineus
ENSAPOG00000001713puf60b10081.973ENSATEG00000006303-10082.765Anabas_testudineus
ENSAPOG00000001713puf60b9985.958ENSAPLG00000010150PUF6010085.958Anas_platyrhynchos
ENSAPOG00000001713puf60b9885.361ENSACAG00000001645PUF609685.361Anolis_carolinensis
ENSAPOG00000001713puf60b9985.227ENSANAG00000018626PUF6010085.988Aotus_nancymaae
ENSAPOG00000001713puf60b9897.856ENSACLG00000004462puf60b10097.856Astatotilapia_calliptera
ENSAPOG00000001713puf60b9887.549ENSAMXG00000036570puf60a9888.142Astyanax_mexicanus
ENSAPOG00000001713puf60b9880.835ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSAPOG00000001713puf60b9985.417ENSBTAG00000037493PUF609985.389Bos_taurus
ENSAPOG00000001713puf60b8251.325WBGene00004389rnp-68354.355Caenorhabditis_elegans
ENSAPOG00000001713puf60b9985.417ENSCJAG00000021485PUF609885.389Callithrix_jacchus
ENSAPOG00000001713puf60b9985.227ENSCAFG00000001400PUF609385.227Canis_familiaris
ENSAPOG00000001713puf60b9985.606ENSCAFG00020018754PUF609885.579Canis_lupus_dingo
ENSAPOG00000001713puf60b9985.417ENSCHIG00000001618PUF608785.417Capra_hircus
ENSAPOG00000001713puf60b9985.606ENSTSYG00000011912PUF6010086.372Carlito_syrichta
ENSAPOG00000001713puf60b9981.015ENSCPOG00000014613PUF609481.015Cavia_porcellus
ENSAPOG00000001713puf60b9985.606ENSCCAG00000007744PUF609885.579Cebus_capucinus
ENSAPOG00000001713puf60b9985.417ENSCATG00000035405PUF609885.389Cercocebus_atys
ENSAPOG00000001713puf60b9985.795ENSCLAG00000009154PUF609385.795Chinchilla_lanigera
ENSAPOG00000001713puf60b9886.180ENSCSAG00000008878PUF6010086.180Chlorocebus_sabaeus
ENSAPOG00000001713puf60b9885.496ENSCPBG00000005595PUF609984.934Chrysemys_picta_bellii
ENSAPOG00000001713puf60b6161.994ENSCING00000002156-8761.994Ciona_intestinalis
ENSAPOG00000001713puf60b9948.694ENSCING00000008436-9948.694Ciona_intestinalis
ENSAPOG00000001713puf60b9553.817ENSCSAVG00000001385-9953.817Ciona_savignyi
ENSAPOG00000001713puf60b9549.284ENSCSAVG00000004765-9750.725Ciona_savignyi
ENSAPOG00000001713puf60b8085.782ENSCANG00000041843PUF6010085.782Colobus_angolensis_palliatus
ENSAPOG00000001713puf60b9985.985ENSCGRG00001017442Puf609385.985Cricetulus_griseus_chok1gshd
ENSAPOG00000001713puf60b9985.985ENSCGRG00000003717Puf609385.985Cricetulus_griseus_crigri
ENSAPOG00000001713puf60b9998.073ENSCSEG00000019887puf60b9497.524Cynoglossus_semilaevis
ENSAPOG00000001713puf60b9978.937ENSCSEG00000014845-9179.061Cynoglossus_semilaevis
ENSAPOG00000001713puf60b8982.051ENSCVAG00000001560-9881.624Cyprinodon_variegatus
ENSAPOG00000001713puf60b9896.881ENSCVAG00000009386puf60b10096.881Cyprinodon_variegatus
ENSAPOG00000001713puf60b9881.404ENSDARG00000001241puf60b9997.619Danio_rerio
ENSAPOG00000001713puf60b9887.048ENSDARG00000032175puf60a9993.191Danio_rerio
ENSAPOG00000001713puf60b9771.318ENSDNOG00000043278PUF609171.318Dasypus_novemcinctus
ENSAPOG00000001713puf60b9985.985ENSDORG00000004585Puf609585.985Dipodomys_ordii
ENSAPOG00000001713puf60b7968.235FBgn0028577hfp9951.103Drosophila_melanogaster
ENSAPOG00000001713puf60b9761.739ENSEBUG00000014291puf60b8463.811Eptatretus_burgeri
ENSAPOG00000001713puf60b9571.283ENSEBUG00000005470-9269.186Eptatretus_burgeri
ENSAPOG00000001713puf60b9985.606ENSEASG00005009695PUF609885.579Equus_asinus_asinus
ENSAPOG00000001713puf60b9985.606ENSECAG00000024681PUF609885.444Equus_caballus
ENSAPOG00000001713puf60b10087.925ENSELUG00000018443-10087.925Esox_lucius
ENSAPOG00000001713puf60b9988.701ENSELUG00000006507puf60b10086.176Esox_lucius
ENSAPOG00000001713puf60b9985.417ENSFCAG00000001045PUF6010086.180Felis_catus
ENSAPOG00000001713puf60b9976.660ENSFALG00000001136PUF609877.040Ficedula_albicollis
ENSAPOG00000001713puf60b9985.606ENSFDAG00000017177PUF609385.606Fukomys_damarensis
ENSAPOG00000001713puf60b9382.688ENSFHEG00000021687PUF6010083.610Fundulus_heteroclitus
ENSAPOG00000001713puf60b10097.338ENSFHEG00000020046puf60b10097.661Fundulus_heteroclitus
ENSAPOG00000001713puf60b9983.015ENSGMOG00000006392puf60b10083.015Gadus_morhua
ENSAPOG00000001713puf60b6590.616ENSGALG00000039901PUF609490.087Gallus_gallus
ENSAPOG00000001713puf60b10097.148ENSGAFG00000021040puf60b10097.466Gambusia_affinis
ENSAPOG00000001713puf60b9880.971ENSGAFG00000004334-9981.314Gambusia_affinis
ENSAPOG00000001713puf60b10072.212ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSAPOG00000001713puf60b9984.586ENSGACG00000004717puf60b9884.586Gasterosteus_aculeatus
ENSAPOG00000001713puf60b9885.496ENSGAGG00000013289PUF609384.774Gopherus_agassizii
ENSAPOG00000001713puf60b9985.417ENSGGOG00000004646PUF609885.389Gorilla_gorilla
ENSAPOG00000001713puf60b10097.529ENSHBUG00000015118puf60b10097.856Haplochromis_burtoni
ENSAPOG00000001713puf60b10082.922ENSHBUG00000009634-10083.903Haplochromis_burtoni
ENSAPOG00000001713puf60b9985.606ENSHGLG00000006111PUF609385.606Heterocephalus_glaber_female
ENSAPOG00000001713puf60b9985.606ENSHGLG00100012362PUF609385.606Heterocephalus_glaber_male
ENSAPOG00000001713puf60b9893.071ENSHCOG00000015541puf60b10093.820Hippocampus_comes
ENSAPOG00000001713puf60b9668.775ENSHCOG00000000378-9966.478Hippocampus_comes
ENSAPOG00000001713puf60b9985.941ENSIPUG00000002453puf60a9985.941Ictalurus_punctatus
ENSAPOG00000001713puf60b9882.197ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSAPOG00000001713puf60b9985.795ENSSTOG00000025037PUF609485.795Ictidomys_tridecemlineatus
ENSAPOG00000001713puf60b9985.985ENSJJAG00000001076Puf609385.985Jaculus_jaculus
ENSAPOG00000001713puf60b9878.503ENSKMAG00000010106-10078.503Kryptolebias_marmoratus
ENSAPOG00000001713puf60b9897.466ENSKMAG00000016745puf60b10097.466Kryptolebias_marmoratus
ENSAPOG00000001713puf60b9994.412ENSLBEG00000012505puf60b10094.412Labrus_bergylta
ENSAPOG00000001713puf60b7180.054ENSLACG00000005456PUF6010080.217Latimeria_chalumnae
ENSAPOG00000001713puf60b10088.826ENSLOCG00000010106puf60b10088.826Lepisosteus_oculatus
ENSAPOG00000001713puf60b9984.848ENSLAFG00000022929PUF609484.848Loxodonta_africana
ENSAPOG00000001713puf60b9985.417ENSMFAG00000043373PUF609985.122Macaca_fascicularis
ENSAPOG00000001713puf60b9985.417ENSMMUG00000013558PUF609885.389Macaca_mulatta
ENSAPOG00000001713puf60b9985.417ENSMNEG00000031099PUF609885.389Macaca_nemestrina
ENSAPOG00000001713puf60b9886.180ENSMLEG00000040009PUF6010086.180Mandrillus_leucophaeus
ENSAPOG00000001713puf60b10083.333ENSMAMG00000019476-10083.523Mastacembelus_armatus
ENSAPOG00000001713puf60b9997.303ENSMAMG00000010394puf60b10094.877Mastacembelus_armatus
ENSAPOG00000001713puf60b10082.922ENSMZEG00005019425-10082.922Maylandia_zebra
ENSAPOG00000001713puf60b9897.856ENSMZEG00005018515puf60b10097.856Maylandia_zebra
ENSAPOG00000001713puf60b9985.958ENSMGAG00000013070PUF609590.407Meleagris_gallopavo
ENSAPOG00000001713puf60b6890.556ENSMAUG00000014267-9089.373Mesocricetus_auratus
ENSAPOG00000001713puf60b9371.253ENSMAUG00000018549-9571.516Mesocricetus_auratus
ENSAPOG00000001713puf60b9985.633ENSMICG00000012226PUF609985.633Microcebus_murinus
ENSAPOG00000001713puf60b9985.985ENSMOCG00000018780Puf609485.985Microtus_ochrogaster
ENSAPOG00000001713puf60b10075.734ENSMMOG00000018059-9976.606Mola_mola
ENSAPOG00000001713puf60b9898.635ENSMMOG00000004217puf60b10098.635Mola_mola
ENSAPOG00000001713puf60b9985.417ENSMODG00000009161PUF609585.417Monodelphis_domestica
ENSAPOG00000001713puf60b10090.684ENSMALG00000006797puf60b10090.684Monopterus_albus
ENSAPOG00000001713puf60b10081.973ENSMALG00000000200-10081.973Monopterus_albus
ENSAPOG00000001713puf60b9986.174MGP_CAROLIEiJ_G0019910Puf609386.174Mus_caroli
ENSAPOG00000001713puf60b9986.174ENSMUSG00000002524Puf609386.174Mus_musculus
ENSAPOG00000001713puf60b9986.174MGP_PahariEiJ_G0019920Puf609386.174Mus_pahari
ENSAPOG00000001713puf60b9986.174MGP_SPRETEiJ_G0020812Puf609386.174Mus_spretus
ENSAPOG00000001713puf60b9985.417ENSMPUG00000008137PUF609385.417Mustela_putorius_furo
ENSAPOG00000001713puf60b9985.227ENSMLUG00000000238-9485.227Myotis_lucifugus
ENSAPOG00000001713puf60b9981.765ENSMLUG00000013032-9881.765Myotis_lucifugus
ENSAPOG00000001713puf60b9985.985ENSNGAG00000000712Puf6010086.756Nannospalax_galili
ENSAPOG00000001713puf60b8394.639ENSNBRG00000013047puf60b10094.639Neolamprologus_brichardi
ENSAPOG00000001713puf60b10082.922ENSNBRG00000017223-10082.922Neolamprologus_brichardi
ENSAPOG00000001713puf60b9985.417ENSNLEG00000002156PUF609885.389Nomascus_leucogenys
ENSAPOG00000001713puf60b7094.585ENSOPRG00000002147PUF607294.585Ochotona_princeps
ENSAPOG00000001713puf60b9563.690ENSODEG00000015513-9861.612Octodon_degus
ENSAPOG00000001713puf60b7189.625ENSODEG00000014024-9089.625Octodon_degus
ENSAPOG00000001713puf60b9997.688ENSONIG00000006247puf60b9997.333Oreochromis_niloticus
ENSAPOG00000001713puf60b10082.543ENSONIG00000014030-9982.543Oreochromis_niloticus
ENSAPOG00000001713puf60b9771.094ENSOANG00000006962PUF609971.094Ornithorhynchus_anatinus
ENSAPOG00000001713puf60b10096.768ENSORLG00000012279puf60b10097.076Oryzias_latipes
ENSAPOG00000001713puf60b9882.115ENSORLG00000028655-9982.274Oryzias_latipes
ENSAPOG00000001713puf60b10096.768ENSORLG00020007333puf6010097.076Oryzias_latipes_hni
ENSAPOG00000001713puf60b9982.197ENSORLG00020018144-9982.197Oryzias_latipes_hni
ENSAPOG00000001713puf60b10096.402ENSORLG00015007718puf60b10096.699Oryzias_latipes_hsok
ENSAPOG00000001713puf60b9982.008ENSORLG00015016833-9982.008Oryzias_latipes_hsok
ENSAPOG00000001713puf60b10094.413ENSOMEG00000001643puf60b10094.413Oryzias_melastigma
ENSAPOG00000001713puf60b9982.163ENSOMEG00000022185-9982.163Oryzias_melastigma
ENSAPOG00000001713puf60b9985.795ENSOGAG00000006259PUF609485.795Otolemur_garnettii
ENSAPOG00000001713puf60b9983.588ENSOARG00000016235PUF609983.523Ovis_aries
ENSAPOG00000001713puf60b9985.417ENSPPAG00000029933PUF609984.615Pan_paniscus
ENSAPOG00000001713puf60b9985.417ENSPPRG00000003257PUF6010086.180Panthera_pardus
ENSAPOG00000001713puf60b9984.736ENSPTIG00000009795PUF609983.112Panthera_tigris_altaica
ENSAPOG00000001713puf60b9985.417ENSPTRG00000020670PUF609984.615Pan_troglodytes
ENSAPOG00000001713puf60b9985.417ENSPTRG00000043963-9885.389Pan_troglodytes
ENSAPOG00000001713puf60b9985.417ENSPANG00000021936PUF609885.389Papio_anubis
ENSAPOG00000001713puf60b10089.544ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSAPOG00000001713puf60b10089.245ENSPKIG00000004295puf60a9992.537Paramormyrops_kingsleyae
ENSAPOG00000001713puf60b9985.389ENSPSIG00000004679PUF609985.389Pelodiscus_sinensis
ENSAPOG00000001713puf60b9894.981ENSPMGG00000013444puf60b10094.981Periophthalmus_magnuspinnatus
ENSAPOG00000001713puf60b9985.985ENSPEMG00000008820Puf609385.985Peromyscus_maniculatus_bairdii
ENSAPOG00000001713puf60b9985.795ENSPCIG00000020270PUF609986.069Phascolarctos_cinereus
ENSAPOG00000001713puf60b10097.338ENSPFOG00000019217puf60b9997.222Poecilia_formosa
ENSAPOG00000001713puf60b10081.439ENSPFOG00000011118-10081.818Poecilia_formosa
ENSAPOG00000001713puf60b10081.818ENSPLAG00000017025-9281.818Poecilia_latipinna
ENSAPOG00000001713puf60b9897.661ENSPLAG00000010754puf60b10097.661Poecilia_latipinna
ENSAPOG00000001713puf60b10081.629ENSPMEG00000009767-9282.008Poecilia_mexicana
ENSAPOG00000001713puf60b10097.338ENSPMEG00000000838puf60b10097.661Poecilia_mexicana
ENSAPOG00000001713puf60b10094.259ENSPREG00000005440puf60b10095.565Poecilia_reticulata
ENSAPOG00000001713puf60b8183.645ENSPPYG00000018951-9783.645Pongo_abelii
ENSAPOG00000001713puf60b8085.782ENSPCAG00000014837PUF6010085.782Procavia_capensis
ENSAPOG00000001713puf60b9985.472ENSPCOG00000027981PUF609985.472Propithecus_coquereli
ENSAPOG00000001713puf60b9896.835ENSPVAG00000016167PUF608196.835Pteropus_vampyrus
ENSAPOG00000001713puf60b10082.922ENSPNYG00000004273-10082.922Pundamilia_nyererei
ENSAPOG00000001713puf60b9897.856ENSPNYG00000002556puf60b10097.856Pundamilia_nyererei
ENSAPOG00000001713puf60b9887.698ENSPNAG00000019909puf60a9988.294Pygocentrus_nattereri
ENSAPOG00000001713puf60b9881.836ENSPNAG00000019415puf60b9081.275Pygocentrus_nattereri
ENSAPOG00000001713puf60b9986.174ENSRNOG00000009960Puf609386.174Rattus_norvegicus
ENSAPOG00000001713puf60b9985.417ENSRBIG00000035274PUF609885.389Rhinopithecus_bieti
ENSAPOG00000001713puf60b9985.417ENSRROG00000029360PUF609985.389Rhinopithecus_roxellana
ENSAPOG00000001713puf60b9984.091ENSSBOG00000027089PUF609983.490Saimiri_boliviensis_boliviensis
ENSAPOG00000001713puf60b8985.084ENSSHAG00000006668PUF609085.084Sarcophilus_harrisii
ENSAPOG00000001713puf60b10084.448ENSSFOG00015019371puf60a9890.224Scleropages_formosus
ENSAPOG00000001713puf60b9882.852ENSSFOG00015019619puf60b9985.976Scleropages_formosus
ENSAPOG00000001713puf60b77100.000ENSSMAG00000016381puf60b78100.000Scophthalmus_maximus
ENSAPOG00000001713puf60b9783.562ENSSDUG00000007048-9783.757Seriola_dumerili
ENSAPOG00000001713puf60b9996.981ENSSDUG00000009935puf60b9997.331Seriola_dumerili
ENSAPOG00000001713puf60b9899.031ENSSLDG00000024011puf60b10096.584Seriola_lalandi_dorsalis
ENSAPOG00000001713puf60b9881.731ENSSLDG00000007366-9982.150Seriola_lalandi_dorsalis
ENSAPOG00000001713puf60b6478.466ENSSPUG00000013518PUF609279.091Sphenodon_punctatus
ENSAPOG00000001713puf60b9883.721ENSSPAG00000020285-10084.302Stegastes_partitus
ENSAPOG00000001713puf60b10097.037ENSSPAG00000012144puf60b10097.037Stegastes_partitus
ENSAPOG00000001713puf60b9985.417ENSSSCG00000038800PUF609884.902Sus_scrofa
ENSAPOG00000001713puf60b9983.144ENSTGUG00000012797-10083.144Taeniopygia_guttata
ENSAPOG00000001713puf60b9781.489ENSTRUG00000008843-10081.891Takifugu_rubripes
ENSAPOG00000001713puf60b10095.817ENSTRUG00000005420puf60b10094.307Takifugu_rubripes
ENSAPOG00000001713puf60b9996.731ENSTNIG00000013675puf60b10096.731Tetraodon_nigroviridis
ENSAPOG00000001713puf60b9980.385ENSTNIG00000003069-10080.192Tetraodon_nigroviridis
ENSAPOG00000001713puf60b5986.254ENSTBEG00000002751-9786.254Tupaia_belangeri
ENSAPOG00000001713puf60b7566.097ENSTBEG00000001899-10066.952Tupaia_belangeri
ENSAPOG00000001713puf60b9885.029ENSTTRG00000017088PUF6010085.221Tursiops_truncatus
ENSAPOG00000001713puf60b9985.606ENSUAMG00000024917PUF609885.579Ursus_americanus
ENSAPOG00000001713puf60b9980.682ENSUMAG00000000272PUF609480.492Ursus_maritimus
ENSAPOG00000001713puf60b9985.606ENSVVUG00000022527PUF6010086.372Vulpes_vulpes
ENSAPOG00000001713puf60b9883.779ENSXETG00000012469puf609983.629Xenopus_tropicalis
ENSAPOG00000001713puf60b9797.581ENSXCOG00000012355puf60b10097.581Xiphophorus_couchianus
ENSAPOG00000001713puf60b10097.338ENSXMAG00000001862puf60b10097.661Xiphophorus_maculatus
ENSAPOG00000001713puf60b9981.782ENSXMAG00000010507-9981.584Xiphophorus_maculatus

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