EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000002274 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 24475 bases
Position: chrMVNR01001245.1:25123-49597
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000021603	PARP	PF00644.20	1e-10	1	1
ENSAPOP00000001019	PARP	PF00644.20	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000015867	-	6404	-	ENSAPOP00000021603	1740 (aa)	-	-
ENSAPOT00000015899	-	4776	-	ENSAPOP00000001019	1591 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000002274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000002274's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000002274	-	94	35.081	ENSAPOG00000006513	si:ch211-219a4.3	92	34.979

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000002274	-	87	93.548	ENSAOCG00000020608	-	92	93.548	Amphiprion_ocellaris
ENSAPOG00000002274	-	55	51.713	ENSAMXG00000010091	-	87	51.797	Astyanax_mexicanus
ENSAPOG00000002274	-	99	53.395	ENSCVAG00000009352	-	94	56.571	Cyprinodon_variegatus
ENSAPOG00000002274	-	93	45.671	ENSDARG00000112454	FO744833.2	93	45.752	Danio_rerio
ENSAPOG00000002274	-	99	49.427	ENSELUG00000013643	-	95	49.543	Esox_lucius
ENSAPOG00000002274	-	84	52.201	ENSIPUG00000019762	-	94	52.201	Ictalurus_punctatus
ENSAPOG00000002274	-	95	51.667	ENSIPUG00000019562	-	88	51.667	Ictalurus_punctatus
ENSAPOG00000002274	-	99	63.143	ENSKMAG00000010882	-	91	73.684	Kryptolebias_marmoratus
ENSAPOG00000002274	-	98	64.912	ENSLBEG00000026419	-	94	59.679	Labrus_bergylta
ENSAPOG00000002274	-	99	56.590	ENSMZEG00005002061	-	94	58.812	Maylandia_zebra
ENSAPOG00000002274	-	86	60.908	ENSMZEG00005027856	-	91	60.908	Maylandia_zebra
ENSAPOG00000002274	-	85	67.797	ENSMMOG00000010419	-	89	67.797	Mola_mola
ENSAPOG00000002274	-	99	61.438	ENSONIG00000000234	-	95	61.325	Oreochromis_niloticus
ENSAPOG00000002274	-	95	61.404	ENSORLG00000017404	-	95	56.442	Oryzias_latipes
ENSAPOG00000002274	-	99	57.619	ENSORLG00000017386	-	95	57.336	Oryzias_latipes
ENSAPOG00000002274	-	99	57.840	ENSORLG00015004253	-	95	57.840	Oryzias_latipes_hsok
ENSAPOG00000002274	-	97	52.083	ENSORLG00015004157	-	91	65.854	Oryzias_latipes_hsok
ENSAPOG00000002274	-	92	60.606	ENSOMEG00000009483	-	91	60.606	Oryzias_melastigma
ENSAPOG00000002274	-	71	36.066	ENSPKIG00000004064	-	75	36.066	Paramormyrops_kingsleyae
ENSAPOG00000002274	-	99	60.089	ENSPFOG00000015738	-	95	61.314	Poecilia_formosa
ENSAPOG00000002274	-	93	67.692	ENSPREG00000017145	-	94	67.742	Poecilia_reticulata
ENSAPOG00000002274	-	94	65.522	ENSPNYG00000006865	-	93	66.021	Pundamilia_nyererei
ENSAPOG00000002274	-	51	35.897	ENSPNAG00000005968	-	69	36.585	Pygocentrus_nattereri
ENSAPOG00000002274	-	99	44.595	ENSSFOG00015006999	-	93	44.081	Scleropages_formosus
ENSAPOG00000002274	-	95	32.298	ENSSFOG00015019732	-	71	33.790	Scleropages_formosus
ENSAPOG00000002274	-	99	63.924	ENSSMAG00000016922	-	95	63.798	Scophthalmus_maximus
ENSAPOG00000002274	-	51	70.577	ENSSDUG00000013560	-	82	70.577	Seriola_dumerili
ENSAPOG00000002274	-	97	70.070	ENSSPAG00000014708	-	94	71.665	Stegastes_partitus
ENSAPOG00000002274	-	99	48.911	ENSTRUG00000003423	-	93	48.766	Takifugu_rubripes
ENSAPOG00000002274	-	93	70.769	ENSXCOG00000012535	-	94	70.968	Xiphophorus_couchianus