EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000002296 (Gene tree)
Gene ID: 110961215
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: BMS1%2C ribosome biogenesis factor
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 17492 bases
Position: chrMVNR01000879.1:8925-26416
Accession: 110961215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001033	AARP2CN	PF08142.12	1.4e-30	1	1
ENSAPOP00000001054	AARP2CN	PF08142.12	1.5e-30	1	1
ENSAPOP00000001039	AARP2CN	PF08142.12	1.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000015814	-	3926	-	ENSAPOP00000001054	1092 (aa)	-	-
ENSAPOT00000015833	-	3650	XM_022208748	ENSAPOP00000001039	1104 (aa)	XP_022064440	-
ENSAPOT00000015857	-	3516	-	ENSAPOP00000001033	1059 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000002296's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000002296's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000002296	bms1	97	66.009	ENSG00000165733	BMS1	71	71.972	Homo_sapiens
ENSAPOG00000002296	bms1	99	60.192	ENSAMEG00000016834	BMS1	71	73.077	Ailuropoda_melanoleuca
ENSAPOG00000002296	bms1	100	79.011	ENSACIG00000002588	bms1	88	79.178	Amphilophus_citrinellus
ENSAPOG00000002296	bms1	100	97.095	ENSAOCG00000018088	bms1	88	97.095	Amphiprion_ocellaris
ENSAPOG00000002296	bms1	100	96.901	ENSAPEG00000014673	bms1	88	96.901	Amphiprion_percula
ENSAPOG00000002296	bms1	100	83.240	ENSATEG00000023465	bms1	88	83.613	Anabas_testudineus
ENSAPOG00000002296	bms1	95	60.969	ENSAPLG00000003759	BMS1	71	72.125	Anas_platyrhynchos
ENSAPOG00000002296	bms1	97	65.303	ENSACAG00000004537	-	70	71.080	Anolis_carolinensis
ENSAPOG00000002296	bms1	95	67.357	ENSANAG00000023432	BMS1	71	72.378	Aotus_nancymaae
ENSAPOG00000002296	bms1	100	81.887	ENSACLG00000001294	bms1	88	82.375	Astatotilapia_calliptera
ENSAPOG00000002296	bms1	94	76.358	ENSAMXG00000011236	bms1	73	77.316	Astyanax_mexicanus
ENSAPOG00000002296	bms1	99	59.672	ENSBTAG00000012878	BMS1	70	73.776	Bos_taurus
ENSAPOG00000002296	bms1	84	56.522	WBGene00022021	Y61A9LA.10	82	56.917	Caenorhabditis_elegans
ENSAPOG00000002296	bms1	97	66.667	ENSCJAG00000021705	BMS1	70	71.972	Callithrix_jacchus
ENSAPOG00000002296	bms1	96	66.210	ENSCAFG00000007114	BMS1	70	72.727	Canis_familiaris
ENSAPOG00000002296	bms1	96	66.210	ENSCAFG00020025282	BMS1	70	72.727	Canis_lupus_dingo
ENSAPOG00000002296	bms1	99	59.551	ENSCHIG00000023251	BMS1	70	73.776	Capra_hircus
ENSAPOG00000002296	bms1	99	56.882	ENSCAPG00000008652	BMS1	70	70.629	Cavia_aperea
ENSAPOG00000002296	bms1	99	59.687	ENSCPOG00000000502	BMS1	71	70.588	Cavia_porcellus
ENSAPOG00000002296	bms1	99	50.927	ENSCCAG00000024969	-	68	64.368	Cebus_capucinus
ENSAPOG00000002296	bms1	88	47.921	ENSCATG00000008695	-	61	58.444	Cercocebus_atys
ENSAPOG00000002296	bms1	97	66.820	ENSCATG00000030625	-	70	71.678	Cercocebus_atys
ENSAPOG00000002296	bms1	99	59.162	ENSCLAG00000002446	BMS1	71	70.934	Chinchilla_lanigera
ENSAPOG00000002296	bms1	97	66.667	ENSCSAG00000011118	BMS1	70	71.972	Chlorocebus_sabaeus
ENSAPOG00000002296	bms1	89	71.280	ENSCHOG00000011055	BMS1	70	71.280	Choloepus_hoffmanni
ENSAPOG00000002296	bms1	99	60.290	ENSCPBG00000025581	BMS1	69	73.519	Chrysemys_picta_bellii
ENSAPOG00000002296	bms1	83	62.825	ENSCING00000003181	-	84	62.825	Ciona_intestinalis
ENSAPOG00000002296	bms1	53	73.377	ENSCSAVG00000004113	-	82	54.023	Ciona_savignyi
ENSAPOG00000002296	bms1	97	67.125	ENSCANG00000011609	BMS1	71	71.626	Colobus_angolensis_palliatus
ENSAPOG00000002296	bms1	99	59.457	ENSCGRG00001019461	Bms1	71	71.280	Cricetulus_griseus_chok1gshd
ENSAPOG00000002296	bms1	99	59.457	ENSCGRG00000009016	Bms1	71	71.280	Cricetulus_griseus_crigri
ENSAPOG00000002296	bms1	100	75.410	ENSCSEG00000002469	bms1	88	74.797	Cynoglossus_semilaevis
ENSAPOG00000002296	bms1	100	80.357	ENSCVAG00000008371	bms1	87	81.073	Cyprinodon_variegatus
ENSAPOG00000002296	bms1	100	70.364	ENSDARG00000054154	bms1	80	77.409	Danio_rerio
ENSAPOG00000002296	bms1	99	59.201	ENSDNOG00000015761	BMS1	70	72.318	Dasypus_novemcinctus
ENSAPOG00000002296	bms1	99	58.808	ENSDORG00000002982	Bms1	71	71.626	Dipodomys_ordii
ENSAPOG00000002296	bms1	82	64.093	FBgn0036686	CG7728	79	62.825	Drosophila_melanogaster
ENSAPOG00000002296	bms1	83	67.857	ENSETEG00000009554	BMS1	60	70.732	Echinops_telfairi
ENSAPOG00000002296	bms1	99	59.757	ENSEASG00005006894	BMS1	71	72.318	Equus_asinus_asinus
ENSAPOG00000002296	bms1	99	60.331	ENSECAG00000001358	BMS1	71	72.318	Equus_caballus
ENSAPOG00000002296	bms1	100	72.187	ENSELUG00000001756	bms1	75	79.426	Esox_lucius
ENSAPOG00000002296	bms1	99	60.122	ENSFCAG00000011220	BMS1	70	71.678	Felis_catus
ENSAPOG00000002296	bms1	99	60.068	ENSFALG00000006882	BMS1	70	71.777	Ficedula_albicollis
ENSAPOG00000002296	bms1	99	59.304	ENSFDAG00000001422	BMS1	71	69.896	Fukomys_damarensis
ENSAPOG00000002296	bms1	100	80.737	ENSFHEG00000003367	bms1	87	79.981	Fundulus_heteroclitus
ENSAPOG00000002296	bms1	99	70.544	ENSGMOG00000000718	bms1	77	78.115	Gadus_morhua
ENSAPOG00000002296	bms1	86	70.353	ENSGALG00000002624	BMS1	69	72.378	Gallus_gallus
ENSAPOG00000002296	bms1	100	84.185	ENSGACG00000015334	bms1	79	83.866	Gasterosteus_aculeatus
ENSAPOG00000002296	bms1	97	69.600	ENSGAGG00000003467	BMS1	72	72.378	Gopherus_agassizii
ENSAPOG00000002296	bms1	100	81.509	ENSHBUG00000022628	bms1	87	82.092	Haplochromis_burtoni
ENSAPOG00000002296	bms1	99	60.263	ENSHGLG00000000477	BMS1	71	70.242	Heterocephalus_glaber_female
ENSAPOG00000002296	bms1	99	60.262	ENSHGLG00100002176	BMS1	71	70.242	Heterocephalus_glaber_male
ENSAPOG00000002296	bms1	99	77.945	ENSHCOG00000017604	bms1	88	76.945	Hippocampus_comes
ENSAPOG00000002296	bms1	100	71.135	ENSIPUG00000017855	bms1	74	78.906	Ictalurus_punctatus
ENSAPOG00000002296	bms1	99	60.105	ENSSTOG00000015063	BMS1	71	72.664	Ictidomys_tridecemlineatus
ENSAPOG00000002296	bms1	99	60.297	ENSJJAG00000017328	Bms1	71	72.318	Jaculus_jaculus
ENSAPOG00000002296	bms1	60	74.729	ENSKMAG00000021982	bms1	78	73.594	Kryptolebias_marmoratus
ENSAPOG00000002296	bms1	100	80.412	ENSLBEG00000028208	bms1	88	80.094	Labrus_bergylta
ENSAPOG00000002296	bms1	99	56.693	ENSLACG00000001600	BMS1	69	77.043	Latimeria_chalumnae
ENSAPOG00000002296	bms1	90	74.811	ENSLOCG00000012914	bms1	76	77.690	Lepisosteus_oculatus
ENSAPOG00000002296	bms1	99	64.593	ENSLAFG00000006250	BMS1	70	71.280	Loxodonta_africana
ENSAPOG00000002296	bms1	86	65.234	ENSMFAG00000037771	BMS1	75	71.972	Macaca_fascicularis
ENSAPOG00000002296	bms1	87	60.550	ENSMMUG00000007426	-	68	63.400	Macaca_mulatta
ENSAPOG00000002296	bms1	75	56.235	ENSMLEG00000029084	-	60	66.084	Mandrillus_leucophaeus
ENSAPOG00000002296	bms1	100	81.010	ENSMAMG00000020855	bms1	88	80.075	Mastacembelus_armatus
ENSAPOG00000002296	bms1	100	81.792	ENSMZEG00005005663	bms1	88	82.281	Maylandia_zebra
ENSAPOG00000002296	bms1	99	59.758	ENSMGAG00000001170	BMS1	75	71.777	Meleagris_gallopavo
ENSAPOG00000002296	bms1	99	60.070	ENSMAUG00000002195	Bms1	71	71.280	Mesocricetus_auratus
ENSAPOG00000002296	bms1	96	66.109	ENSMICG00000009977	BMS1	70	71.972	Microcebus_murinus
ENSAPOG00000002296	bms1	99	57.359	ENSMOCG00000002038	Bms1	70	71.626	Microtus_ochrogaster
ENSAPOG00000002296	bms1	100	79.268	ENSMMOG00000000977	bms1	87	77.943	Mola_mola
ENSAPOG00000002296	bms1	99	59.075	ENSMODG00000001177	BMS1	69	71.724	Monodelphis_domestica
ENSAPOG00000002296	bms1	100	83.224	ENSMALG00000009680	bms1	88	82.143	Monopterus_albus
ENSAPOG00000002296	bms1	70	78.723	MGP_CAROLIEiJ_G0028785	-	62	79.060	Mus_caroli
ENSAPOG00000002296	bms1	99	58.813	ENSMUSG00000030138	Bms1	72	71.280	Mus_musculus
ENSAPOG00000002296	bms1	99	58.988	MGP_PahariEiJ_G0022539	Bms1	71	71.280	Mus_pahari
ENSAPOG00000002296	bms1	99	58.711	MGP_SPRETEiJ_G0029816	Bms1	72	70.934	Mus_spretus
ENSAPOG00000002296	bms1	97	67.381	ENSMPUG00000017276	BMS1	72	68.262	Mustela_putorius_furo
ENSAPOG00000002296	bms1	99	59.930	ENSMLUG00000003260	BMS1	71	71.280	Myotis_lucifugus
ENSAPOG00000002296	bms1	97	57.760	ENSNGAG00000015258	Bms1	71	67.512	Nannospalax_galili
ENSAPOG00000002296	bms1	97	64.724	ENSNLEG00000015791	BMS1	70	71.626	Nomascus_leucogenys
ENSAPOG00000002296	bms1	85	72.401	ENSOPRG00000005195	BMS1	69	72.401	Ochotona_princeps
ENSAPOG00000002296	bms1	99	59.722	ENSODEG00000005554	BMS1	71	71.626	Octodon_degus
ENSAPOG00000002296	bms1	100	82.092	ENSONIG00000007227	bms1	88	82.237	Oreochromis_niloticus
ENSAPOG00000002296	bms1	99	58.988	ENSOANG00000000662	-	70	71.379	Ornithorhynchus_anatinus
ENSAPOG00000002296	bms1	95	68.562	ENSOCUG00000005354	BMS1	71	72.664	Oryctolagus_cuniculus
ENSAPOG00000002296	bms1	99	80.529	ENSORLG00000014655	bms1	87	80.435	Oryzias_latipes
ENSAPOG00000002296	bms1	99	76.406	ENSORLG00020016246	bms1	87	76.774	Oryzias_latipes_hni
ENSAPOG00000002296	bms1	99	77.737	ENSORLG00015014183	bms1	87	77.737	Oryzias_latipes_hsok
ENSAPOG00000002296	bms1	99	80.813	ENSOMEG00000015042	bms1	87	81.002	Oryzias_melastigma
ENSAPOG00000002296	bms1	99	58.834	ENSOGAG00000006511	BMS1	70	72.318	Otolemur_garnettii
ENSAPOG00000002296	bms1	99	59.637	ENSOARG00000003900	BMS1	70	73.776	Ovis_aries
ENSAPOG00000002296	bms1	97	60.000	ENSPPAG00000027837	BMS1	70	71.626	Pan_paniscus
ENSAPOG00000002296	bms1	99	59.741	ENSPPRG00000001311	BMS1	70	71.678	Panthera_pardus
ENSAPOG00000002296	bms1	99	58.384	ENSPTIG00000009652	BMS1	70	71.678	Panthera_tigris_altaica
ENSAPOG00000002296	bms1	97	66.313	ENSPTRG00000002441	BMS1	71	71.626	Pan_troglodytes
ENSAPOG00000002296	bms1	97	77.796	ENSPKIG00000008165	bms1	78	77.796	Paramormyrops_kingsleyae
ENSAPOG00000002296	bms1	92	67.130	ENSPSIG00000006481	BMS1	70	74.564	Pelodiscus_sinensis
ENSAPOG00000002296	bms1	91	65.569	ENSPEMG00000022467	Bms1	70	65.569	Peromyscus_maniculatus_bairdii
ENSAPOG00000002296	bms1	86	67.040	ENSPCIG00000001339	BMS1	69	72.069	Phascolarctos_cinereus
ENSAPOG00000002296	bms1	96	83.628	ENSPFOG00000015180	bms1	98	79.190	Poecilia_formosa
ENSAPOG00000002296	bms1	99	79.359	ENSPMEG00000023176	bms1	82	78.982	Poecilia_mexicana
ENSAPOG00000002296	bms1	99	79.037	ENSPREG00000002695	bms1	87	78.942	Poecilia_reticulata
ENSAPOG00000002296	bms1	70	75.510	ENSPCAG00000014528	BMS1	50	75.510	Procavia_capensis
ENSAPOG00000002296	bms1	96	63.303	ENSPCOG00000023834	-	72	71.280	Propithecus_coquereli
ENSAPOG00000002296	bms1	99	59.912	ENSPVAG00000000725	BMS1	71	71.724	Pteropus_vampyrus
ENSAPOG00000002296	bms1	100	78.850	ENSPNYG00000018866	bms1	88	79.171	Pundamilia_nyererei
ENSAPOG00000002296	bms1	96	77.795	ENSPNAG00000000676	bms1	79	78.106	Pygocentrus_nattereri
ENSAPOG00000002296	bms1	78	57.941	ENSRNOG00000006576	Bms1	64	71.280	Rattus_norvegicus
ENSAPOG00000002296	bms1	89	66.820	ENSRROG00000040101	BMS1	71	67.568	Rhinopithecus_roxellana
ENSAPOG00000002296	bms1	78	43.212	YPL217C	-	63	54.661	Saccharomyces_cerevisiae
ENSAPOG00000002296	bms1	99	68.850	ENSSBOG00000035778	BMS1	71	71.626	Saimiri_boliviensis_boliviensis
ENSAPOG00000002296	bms1	99	64.148	ENSSHAG00000005062	BMS1	69	72.414	Sarcophilus_harrisii
ENSAPOG00000002296	bms1	100	69.119	ENSSFOG00015022313	bms1	72	79.491	Scleropages_formosus
ENSAPOG00000002296	bms1	100	81.359	ENSSMAG00000019966	bms1	88	82.094	Scophthalmus_maximus
ENSAPOG00000002296	bms1	100	83.380	ENSSDUG00000016875	bms1	88	84.366	Seriola_dumerili
ENSAPOG00000002296	bms1	100	84.022	ENSSLDG00000015199	bms1	88	83.533	Seriola_lalandi_dorsalis
ENSAPOG00000002296	bms1	58	74.000	ENSSARG00000014407	BMS1	66	74.000	Sorex_araneus
ENSAPOG00000002296	bms1	99	69.427	ENSSPUG00000014454	BMS1	70	73.077	Sphenodon_punctatus
ENSAPOG00000002296	bms1	99	63.136	ENSSSCG00000010198	BMS1	70	73.427	Sus_scrofa
ENSAPOG00000002296	bms1	95	71.154	ENSTGUG00000006302	-	70	71.972	Taeniopygia_guttata
ENSAPOG00000002296	bms1	99	71.172	ENSTRUG00000008028	bms1	78	75.917	Takifugu_rubripes
ENSAPOG00000002296	bms1	99	75.962	ENSTNIG00000006216	bms1	72	83.448	Tetraodon_nigroviridis
ENSAPOG00000002296	bms1	66	70.764	ENSTBEG00000001673	-	56	70.033	Tupaia_belangeri
ENSAPOG00000002296	bms1	99	58.824	ENSTTRG00000007983	BMS1	68	77.308	Tursiops_truncatus
ENSAPOG00000002296	bms1	99	60.245	ENSUAMG00000023996	BMS1	71	73.077	Ursus_americanus
ENSAPOG00000002296	bms1	99	60.000	ENSUMAG00000016523	BMS1	71	73.077	Ursus_maritimus
ENSAPOG00000002296	bms1	82	73.363	ENSVPAG00000007477	BMS1	74	72.511	Vicugna_pacos
ENSAPOG00000002296	bms1	96	66.210	ENSVVUG00000021305	BMS1	70	72.727	Vulpes_vulpes
ENSAPOG00000002296	bms1	98	61.588	ENSXETG00000008158	bms1	50	74.913	Xenopus_tropicalis
ENSAPOG00000002296	bms1	99	76.809	ENSXCOG00000000506	bms1	87	77.008	Xiphophorus_couchianus
ENSAPOG00000002296	bms1	99	78.302	ENSXMAG00000014236	bms1	87	79.509	Xiphophorus_maculatus