EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAPOG00000002875 (Gene tree)
Gene ID: 110969640
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 8875 bases
Position: chrMVNR01002427.1:62437-71311
Accession: 110969640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001567	zf-met	PF12874.7	1.8e-22	1	3
ENSAPOP00000001567	zf-met	PF12874.7	1.8e-22	2	3
ENSAPOP00000001567	zf-met	PF12874.7	1.8e-22	3	3
ENSAPOP00000001567	zf-C2H2_jaz	PF12171.8	6.1e-16	1	2
ENSAPOP00000001567	zf-C2H2_jaz	PF12171.8	6.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014922	-	5682	XM_022219763	ENSAPOP00000001567	540 (aa)	XP_022075455	-

Gene Model

Click here to download ENSAPOG00000002875's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000002875's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000002875	-	100	92.593	ENSAOCG00000007093	-	93	88.889	Amphiprion_ocellaris
ENSAPOG00000002875	-	100	65.321	ENSATEG00000023589	-	88	66.606	Anabas_testudineus
ENSAPOG00000002875	-	100	65.804	ENSACLG00000012751	-	88	65.989	Astatotilapia_calliptera
ENSAPOG00000002875	-	99	48.333	ENSCVAG00000018034	-	65	52.616	Cyprinodon_variegatus
ENSAPOG00000002875	-	65	49.863	ENSELUG00000010589	-	59	49.315	Esox_lucius
ENSAPOG00000002875	-	91	58.032	ENSGACG00000009018	-	100	59.237	Gasterosteus_aculeatus
ENSAPOG00000002875	-	100	65.867	ENSHBUG00000020963	-	58	67.705	Haplochromis_burtoni
ENSAPOG00000002875	-	96	48.084	ENSHCOG00000013075	-	100	47.308	Hippocampus_comes
ENSAPOG00000002875	-	100	65.321	ENSLBEG00000027221	-	86	65.688	Labrus_bergylta
ENSAPOG00000002875	-	100	65.619	ENSMZEG00005026847	-	88	65.804	Maylandia_zebra
ENSAPOG00000002875	-	66	68.362	ENSMMOG00000012396	-	66	68.644	Mola_mola
ENSAPOG00000002875	-	94	67.315	ENSMALG00000002560	-	100	65.759	Monopterus_albus
ENSAPOG00000002875	-	98	60.935	ENSSMAG00000009994	-	98	62.152	Scophthalmus_maximus
ENSAPOG00000002875	-	100	67.216	ENSSDUG00000022406	-	89	65.751	Seriola_dumerili
ENSAPOG00000002875	-	94	80.702	ENSSPAG00000018876	-	100	84.016	Stegastes_partitus
ENSAPOG00000002875	-	57	34.234	ENSVVUG00000001235	ZNF346	69	33.624	Vulpes_vulpes