EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000002946 (Gene tree)
Gene ID: 110961902
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 11831 bases
Position: chrMVNR01000029.1:708125-719955
Accession: 110961902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001621	RRM_1	PF00076.22	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014827	-	6439	XM_022209701	ENSAPOP00000001621	1114 (aa)	XP_022065393	UPI000B8F90F8

Gene Model

Click here to download ENSAPOG00000002946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000002946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000002946	scaf4a	67	55.873	ENSAPOG00000019615	scaf4b	77	48.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000002946	scaf4a	55	57.251	ENSG00000156304	SCAF4	79	54.973	Homo_sapiens
ENSAPOG00000002946	scaf4a	100	97.135	ENSAOCG00000000615	scaf4a	100	97.135	Amphiprion_ocellaris
ENSAPOG00000002946	scaf4a	63	59.567	ENSAOCG00000010433	scaf4b	61	66.818	Amphiprion_ocellaris
ENSAPOG00000002946	scaf4a	63	59.567	ENSAPEG00000010913	scaf4b	61	66.216	Amphiprion_percula
ENSAPOG00000002946	scaf4a	85	40.571	ENSAPEG00000020115	SCAF8	51	41.643	Amphiprion_percula
ENSAPOG00000002946	scaf4a	100	96.861	ENSAPEG00000021229	scaf4a	100	96.861	Amphiprion_percula
ENSAPOG00000002946	scaf4a	60	49.412	ENSATEG00000011758	scaf4b	78	50.077	Anabas_testudineus
ENSAPOG00000002946	scaf4a	62	48.655	ENSACAG00000002569	SCAF4	74	49.227	Anolis_carolinensis
ENSAPOG00000002946	scaf4a	55	57.251	ENSANAG00000037494	SCAF4	79	53.789	Aotus_nancymaae
ENSAPOG00000002946	scaf4a	50	61.905	ENSACLG00000024833	scaf4b	67	64.732	Astatotilapia_calliptera
ENSAPOG00000002946	scaf4a	88	54.280	ENSAMXG00000008585	scaf4a	84	59.913	Astyanax_mexicanus
ENSAPOG00000002946	scaf4a	55	57.801	ENSBTAG00000018855	SCAF4	79	52.345	Bos_taurus
ENSAPOG00000002946	scaf4a	55	56.822	ENSCJAG00000008993	SCAF4	90	59.067	Callithrix_jacchus
ENSAPOG00000002946	scaf4a	54	58.605	ENSCAFG00020026019	SCAF4	68	62.353	Canis_lupus_dingo
ENSAPOG00000002946	scaf4a	55	57.312	ENSCHIG00000008385	SCAF4	79	51.860	Capra_hircus
ENSAPOG00000002946	scaf4a	54	57.121	ENSTSYG00000011344	SCAF4	82	54.861	Carlito_syrichta
ENSAPOG00000002946	scaf4a	55	59.091	ENSCATG00000030379	SCAF4	79	52.620	Cercocebus_atys
ENSAPOG00000002946	scaf4a	55	59.063	ENSCANG00000029847	SCAF4	79	52.615	Colobus_angolensis_palliatus
ENSAPOG00000002946	scaf4a	100	72.140	ENSCSEG00000019549	scaf4a	99	70.218	Cynoglossus_semilaevis
ENSAPOG00000002946	scaf4a	84	57.362	ENSDARG00000077093	scaf4a	79	56.455	Danio_rerio
ENSAPOG00000002946	scaf4a	56	83.854	ENSELUG00000009909	scaf4a	77	84.817	Esox_lucius
ENSAPOG00000002946	scaf4a	100	78.036	ENSFHEG00000017866	scaf4a	76	79.840	Fundulus_heteroclitus
ENSAPOG00000002946	scaf4a	58	60.496	ENSGALG00000033965	SCAF4	86	53.429	Gallus_gallus
ENSAPOG00000002946	scaf4a	67	81.184	ENSGAFG00000019460	scaf4a	83	82.075	Gambusia_affinis
ENSAPOG00000002946	scaf4a	73	80.717	ENSGACG00000020580	scaf4a	87	81.917	Gasterosteus_aculeatus
ENSAPOG00000002946	scaf4a	62	54.939	ENSGGOG00000015557	SCAF4	75	57.658	Gorilla_gorilla
ENSAPOG00000002946	scaf4a	100	81.315	ENSHBUG00000007920	scaf4a	85	82.907	Haplochromis_burtoni
ENSAPOG00000002946	scaf4a	57	91.912	ENSHCOG00000006849	scaf4a	62	69.907	Hippocampus_comes
ENSAPOG00000002946	scaf4a	83	59.420	ENSIPUG00000011285	scaf4	83	75.000	Ictalurus_punctatus
ENSAPOG00000002946	scaf4a	64	58.242	ENSKMAG00000005742	scaf4b	61	64.732	Kryptolebias_marmoratus
ENSAPOG00000002946	scaf4a	98	79.345	ENSLBEG00000014675	scaf4a	100	80.255	Labrus_bergylta
ENSAPOG00000002946	scaf4a	57	47.009	ENSLOCG00000009162	scaf4a	86	59.244	Lepisosteus_oculatus
ENSAPOG00000002946	scaf4a	56	61.468	ENSLAFG00000010710	SCAF4	81	54.686	Loxodonta_africana
ENSAPOG00000002946	scaf4a	55	59.091	ENSMFAG00000037668	SCAF4	78	52.620	Macaca_fascicularis
ENSAPOG00000002946	scaf4a	55	59.091	ENSMMUG00000001712	SCAF4	78	52.620	Macaca_mulatta
ENSAPOG00000002946	scaf4a	55	59.091	ENSMNEG00000032966	SCAF4	78	52.620	Macaca_nemestrina
ENSAPOG00000002946	scaf4a	54	58.615	ENSMLEG00000039674	SCAF4	78	52.216	Mandrillus_leucophaeus
ENSAPOG00000002946	scaf4a	74	80.278	ENSMAMG00000013223	scaf4a	100	77.726	Mastacembelus_armatus
ENSAPOG00000002946	scaf4a	99	81.826	ENSMZEG00005024349	scaf4a	100	80.509	Maylandia_zebra
ENSAPOG00000002946	scaf4a	59	58.485	ENSMGAG00000014515	SCAF4	86	52.996	Meleagris_gallopavo
ENSAPOG00000002946	scaf4a	100	81.239	ENSONIG00000004687	scaf4a	94	76.256	Oreochromis_niloticus
ENSAPOG00000002946	scaf4a	100	71.851	ENSORLG00000004384	scaf4a	84	79.893	Oryzias_latipes
ENSAPOG00000002946	scaf4a	100	70.668	ENSORLG00020011857	scaf4a	80	78.016	Oryzias_latipes_hni
ENSAPOG00000002946	scaf4a	65	55.914	ENSORLG00020013853	scaf4b	68	56.410	Oryzias_latipes_hni
ENSAPOG00000002946	scaf4a	100	72.851	ENSORLG00015017880	scaf4a	86	74.400	Oryzias_latipes_hsok
ENSAPOG00000002946	scaf4a	99	73.751	ENSOMEG00000014482	scaf4a	98	79.088	Oryzias_melastigma
ENSAPOG00000002946	scaf4a	54	56.072	ENSOARG00000013894	SCAF4	78	51.012	Ovis_aries
ENSAPOG00000002946	scaf4a	55	57.251	ENSPPAG00000028535	SCAF4	79	53.682	Pan_paniscus
ENSAPOG00000002946	scaf4a	55	57.251	ENSPTRG00000013848	SCAF4	79	53.682	Pan_troglodytes
ENSAPOG00000002946	scaf4a	55	59.091	ENSPANG00000017332	SCAF4	79	51.991	Papio_anubis
ENSAPOG00000002946	scaf4a	61	65.890	ENSPKIG00000022408	scaf4a	99	64.354	Paramormyrops_kingsleyae
ENSAPOG00000002946	scaf4a	50	40.945	ENSPSIG00000014242	SCAF4	79	54.810	Pelodiscus_sinensis
ENSAPOG00000002946	scaf4a	100	51.309	ENSPMGG00000016741	scaf4a	68	69.928	Periophthalmus_magnuspinnatus
ENSAPOG00000002946	scaf4a	71	46.133	ENSPFOG00000003261	scaf4b	53	55.738	Poecilia_formosa
ENSAPOG00000002946	scaf4a	86	73.814	ENSPFOG00000017156	scaf4a	97	74.792	Poecilia_formosa
ENSAPOG00000002946	scaf4a	67	80.574	ENSPLAG00000001972	scaf4a	91	82.838	Poecilia_latipinna
ENSAPOG00000002946	scaf4a	55	58.485	ENSPCOG00000018710	SCAF4	78	54.412	Propithecus_coquereli
ENSAPOG00000002946	scaf4a	50	61.905	ENSPNYG00000010526	scaf4b	67	64.732	Pundamilia_nyererei
ENSAPOG00000002946	scaf4a	51	73.913	ENSPNAG00000015199	-	50	73.913	Pygocentrus_nattereri
ENSAPOG00000002946	scaf4a	70	59.783	ENSPNAG00000016892	scaf4a	84	59.805	Pygocentrus_nattereri
ENSAPOG00000002946	scaf4a	55	58.912	ENSRROG00000029488	SCAF4	79	52.615	Rhinopithecus_roxellana
ENSAPOG00000002946	scaf4a	88	46.673	ENSSFOG00015006338	scaf4a	83	54.897	Scleropages_formosus
ENSAPOG00000002946	scaf4a	80	44.284	ENSSMAG00000003738	scaf4b	81	50.651	Scophthalmus_maximus
ENSAPOG00000002946	scaf4a	99	77.730	ENSSMAG00000017901	scaf4a	72	82.861	Scophthalmus_maximus
ENSAPOG00000002946	scaf4a	100	85.092	ENSSDUG00000012918	scaf4a	100	84.568	Seriola_dumerili
ENSAPOG00000002946	scaf4a	100	85.353	ENSSLDG00000021671	scaf4a	100	84.830	Seriola_lalandi_dorsalis
ENSAPOG00000002946	scaf4a	55	55.947	ENSSSCG00000021023	SCAF4	79	54.496	Sus_scrofa
ENSAPOG00000002946	scaf4a	61	48.029	ENSTRUG00000009536	-	79	58.242	Takifugu_rubripes
ENSAPOG00000002946	scaf4a	66	64.373	ENSTRUG00000023543	scaf4a	89	76.253	Takifugu_rubripes
ENSAPOG00000002946	scaf4a	83	61.171	ENSTNIG00000009945	scaf4a	84	65.462	Tetraodon_nigroviridis
ENSAPOG00000002946	scaf4a	54	57.643	ENSUMAG00000016962	SCAF4	80	53.761	Ursus_maritimus
ENSAPOG00000002946	scaf4a	90	55.186	ENSXETG00000007351	scaf4	87	51.259	Xenopus_tropicalis