EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000002953 (Gene tree)
Gene ID: 110970187
Gene Symbol: rbm4.3 (1 of many)
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4110 bases
Position: chrMVNR01002633.1:50735-54844
Accession: 110970187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001624	RRM_5	PF13893.6	4.2e-12	1	2
ENSAPOP00000001624	RRM_5	PF13893.6	4.2e-12	2	2
ENSAPOP00000001628	RRM_5	PF13893.6	4.2e-12	1	2
ENSAPOP00000001628	RRM_5	PF13893.6	4.2e-12	2	2
ENSAPOP00000001624	RRM_1	PF00076.22	1.4e-28	1	2
ENSAPOP00000001624	RRM_1	PF00076.22	1.4e-28	2	2
ENSAPOP00000001628	RRM_1	PF00076.22	1.4e-28	1	2
ENSAPOP00000001628	RRM_1	PF00076.22	1.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014830	-	3196	-	ENSAPOP00000001624	348 (aa)	-	UPI000B9034FA
ENSAPOT00000014834	-	2814	XM_022220421	ENSAPOP00000001628	348 (aa)	XP_022076113	UPI000B9034FA

Gene Model

Click here to download ENSAPOG00000002953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000002953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000002953	rbm4.3	100	39.954	ENSAPOG00000012353	rbm4.1	100	56.000
ENSAPOG00000002953	rbm4.3	97	71.006	ENSAPOG00000002991	rbm4.3	96	68.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000002953	rbm4.3	97	72.997	ENSACIG00000021295	rbm4.3	96	71.513	Amphilophus_citrinellus
ENSAPOG00000002953	rbm4.3	100	88.793	ENSACIG00000021311	-	100	88.793	Amphilophus_citrinellus
ENSAPOG00000002953	rbm4.3	100	99.138	ENSAOCG00000008015	rbm4.3	100	99.138	Amphiprion_ocellaris
ENSAPOG00000002953	rbm4.3	97	71.006	ENSAOCG00000007992	rbm4.3	96	69.231	Amphiprion_ocellaris
ENSAPOG00000002953	rbm4.3	100	98.563	ENSAPEG00000017324	rbm4.3	100	98.563	Amphiprion_percula
ENSAPOG00000002953	rbm4.3	97	71.302	ENSAPEG00000017288	rbm4.3	96	69.527	Amphiprion_percula
ENSAPOG00000002953	rbm4.3	97	71.681	ENSATEG00000019395	rbm4.3	96	67.647	Anabas_testudineus
ENSAPOG00000002953	rbm4.3	100	92.816	ENSATEG00000019375	rbm4.3	100	92.529	Anabas_testudineus
ENSAPOG00000002953	rbm4.3	99	70.940	ENSACLG00000010642	rbm4.3	99	70.370	Astatotilapia_calliptera
ENSAPOG00000002953	rbm4.3	100	89.080	ENSACLG00000010620	-	100	89.080	Astatotilapia_calliptera
ENSAPOG00000002953	rbm4.3	61	76.777	ENSAMXG00000040224	rbm4.3	82	76.961	Astyanax_mexicanus
ENSAPOG00000002953	rbm4.3	100	82.000	ENSCSEG00000013659	rbm4.3	100	81.714	Cynoglossus_semilaevis
ENSAPOG00000002953	rbm4.3	100	75.568	ENSCVAG00000008508	rbm4.3	100	80.114	Cyprinodon_variegatus
ENSAPOG00000002953	rbm4.3	99	66.571	ENSCVAG00000008502	rbm4.3	99	67.236	Cyprinodon_variegatus
ENSAPOG00000002953	rbm4.3	95	73.669	ENSDARG00000022129	rbm4.3	97	69.795	Danio_rerio
ENSAPOG00000002953	rbm4.3	100	71.186	ENSELUG00000022168	rbm4.3	100	70.940	Esox_lucius
ENSAPOG00000002953	rbm4.3	99	77.364	ENSELUG00000022155	rbm4.3	99	75.645	Esox_lucius
ENSAPOG00000002953	rbm4.3	99	75.429	ENSELUG00000022150	rbm4.3	97	72.353	Esox_lucius
ENSAPOG00000002953	rbm4.3	80	81.786	ENSFHEG00000023137	rbm4.3	84	83.026	Fundulus_heteroclitus
ENSAPOG00000002953	rbm4.3	100	62.712	ENSGAFG00000001935	rbm4.3	100	62.535	Gambusia_affinis
ENSAPOG00000002953	rbm4.3	97	65.103	ENSGACG00000019980	rbm4.3	95	65.103	Gasterosteus_aculeatus
ENSAPOG00000002953	rbm4.3	100	89.080	ENSHBUG00000009020	-	100	89.080	Haplochromis_burtoni
ENSAPOG00000002953	rbm4.3	99	71.510	ENSHBUG00000009051	rbm4.3	99	70.940	Haplochromis_burtoni
ENSAPOG00000002953	rbm4.3	95	74.850	ENSHCOG00000010349	rbm4.3	100	74.504	Hippocampus_comes
ENSAPOG00000002953	rbm4.3	100	69.318	ENSIPUG00000022943	RBM4B	100	70.170	Ictalurus_punctatus
ENSAPOG00000002953	rbm4.3	100	76.923	ENSKMAG00000017468	rbm4.3	100	73.504	Kryptolebias_marmoratus
ENSAPOG00000002953	rbm4.3	97	63.905	ENSKMAG00000014541	rbm4.3	95	64.431	Kryptolebias_marmoratus
ENSAPOG00000002953	rbm4.3	54	74.346	ENSLBEG00000001025	rbm4.3	79	75.862	Labrus_bergylta
ENSAPOG00000002953	rbm4.3	100	88.539	ENSLBEG00000001071	-	100	88.539	Labrus_bergylta
ENSAPOG00000002953	rbm4.3	95	63.158	ENSLOCG00000002755	rbm4.3	100	62.698	Lepisosteus_oculatus
ENSAPOG00000002953	rbm4.3	100	92.816	ENSMAMG00000004715	-	84	92.529	Mastacembelus_armatus
ENSAPOG00000002953	rbm4.3	97	70.710	ENSMAMG00000004701	rbm4.3	96	68.935	Mastacembelus_armatus
ENSAPOG00000002953	rbm4.3	99	70.940	ENSMZEG00005028540	rbm4.3	99	70.370	Maylandia_zebra
ENSAPOG00000002953	rbm4.3	86	72.819	ENSMZEG00005007441	rbm4.3	79	70.470	Maylandia_zebra
ENSAPOG00000002953	rbm4.3	100	85.057	ENSMZEG00005007417	-	100	85.057	Maylandia_zebra
ENSAPOG00000002953	rbm4.3	85	83.446	ENSMZEG00005028537	-	85	82.508	Maylandia_zebra
ENSAPOG00000002953	rbm4.3	97	67.647	ENSMMOG00000012191	rbm4.3	96	67.647	Mola_mola
ENSAPOG00000002953	rbm4.3	91	69.716	ENSMALG00000003032	rbm4.3	95	64.353	Monopterus_albus
ENSAPOG00000002953	rbm4.3	88	90.260	ENSMALG00000003001	rbm4.3	87	92.256	Monopterus_albus
ENSAPOG00000002953	rbm4.3	97	69.436	ENSMALG00000015014	-	96	65.579	Monopterus_albus
ENSAPOG00000002953	rbm4.3	97	71.302	ENSNBRG00000012372	rbm4.3	96	69.231	Neolamprologus_brichardi
ENSAPOG00000002953	rbm4.3	97	71.261	ENSONIG00000018378	rbm4.3	96	69.501	Oreochromis_niloticus
ENSAPOG00000002953	rbm4.3	100	89.080	ENSONIG00000018380	-	100	89.080	Oreochromis_niloticus
ENSAPOG00000002953	rbm4.3	96	60.714	ENSORLG00000024749	rbm4.3	95	55.357	Oryzias_latipes
ENSAPOG00000002953	rbm4.3	100	77.159	ENSORLG00000011589	rbm4.3	100	76.323	Oryzias_latipes
ENSAPOG00000002953	rbm4.3	100	74.095	ENSORLG00000012473	rbm4.3	100	73.538	Oryzias_latipes
ENSAPOG00000002953	rbm4.3	100	74.095	ENSORLG00020012464	rbm4.3	100	73.538	Oryzias_latipes_hni
ENSAPOG00000002953	rbm4.3	99	61.318	ENSORLG00020012482	rbm4.3	99	56.322	Oryzias_latipes_hni
ENSAPOG00000002953	rbm4.3	100	76.880	ENSORLG00020012474	rbm4.3	100	76.045	Oryzias_latipes_hni
ENSAPOG00000002953	rbm4.3	96	61.607	ENSORLG00015013721	rbm4.3	95	56.250	Oryzias_latipes_hsok
ENSAPOG00000002953	rbm4.3	100	75.487	ENSORLG00015013698	rbm4.3	100	76.323	Oryzias_latipes_hsok
ENSAPOG00000002953	rbm4.3	100	74.095	ENSORLG00015013686	rbm4.3	100	73.538	Oryzias_latipes_hsok
ENSAPOG00000002953	rbm4.3	100	74.302	ENSOMEG00000005918	rbm4.3	100	75.140	Oryzias_melastigma
ENSAPOG00000002953	rbm4.3	97	75.000	ENSOMEG00000005929	rbm4.3	100	75.556	Oryzias_melastigma
ENSAPOG00000002953	rbm4.3	96	61.310	ENSOMEG00000005950	rbm4.3	95	62.018	Oryzias_melastigma
ENSAPOG00000002953	rbm4.3	94	71.386	ENSPKIG00000007001	rbm4.3	100	70.000	Paramormyrops_kingsleyae
ENSAPOG00000002953	rbm4.3	100	77.273	ENSPLAG00000006131	rbm4.3	100	78.977	Poecilia_latipinna
ENSAPOG00000002953	rbm4.3	99	65.254	ENSPLAG00000006077	rbm4.3	99	63.944	Poecilia_latipinna
ENSAPOG00000002953	rbm4.3	99	65.722	ENSPMEG00000024260	rbm4.3	99	63.739	Poecilia_mexicana
ENSAPOG00000002953	rbm4.3	100	75.852	ENSPMEG00000024263	rbm4.3	100	79.830	Poecilia_mexicana
ENSAPOG00000002953	rbm4.3	100	76.989	ENSPMEG00000024271	rbm4.3	100	78.693	Poecilia_mexicana
ENSAPOG00000002953	rbm4.3	100	73.352	ENSPREG00000002156	rbm4.3	100	75.358	Poecilia_reticulata
ENSAPOG00000002953	rbm4.3	99	66.106	ENSPREG00000002093	-	99	65.537	Poecilia_reticulata
ENSAPOG00000002953	rbm4.3	99	70.940	ENSPNYG00000018564	rbm4.3	99	70.655	Pundamilia_nyererei
ENSAPOG00000002953	rbm4.3	100	89.080	ENSPNYG00000018541	rbm4.3	100	89.080	Pundamilia_nyererei
ENSAPOG00000002953	rbm4.3	100	71.944	ENSPNAG00000013053	rbm4.3	100	69.638	Pygocentrus_nattereri
ENSAPOG00000002953	rbm4.3	100	69.061	ENSSFOG00015015563	rbm4.3	100	68.508	Scleropages_formosus
ENSAPOG00000002953	rbm4.3	100	91.954	ENSSMAG00000013644	rbm4.3	100	90.230	Scophthalmus_maximus
ENSAPOG00000002953	rbm4.3	97	67.656	ENSSMAG00000013653	rbm4.3	96	64.095	Scophthalmus_maximus
ENSAPOG00000002953	rbm4.3	97	71.176	ENSSDUG00000018422	rbm4.3	96	66.471	Seriola_dumerili
ENSAPOG00000002953	rbm4.3	100	92.816	ENSSDUG00000018435	rbm4.3	100	92.529	Seriola_dumerili
ENSAPOG00000002953	rbm4.3	97	70.796	ENSSLDG00000017182	rbm4.3	96	66.077	Seriola_lalandi_dorsalis
ENSAPOG00000002953	rbm4.3	100	92.816	ENSSLDG00000017204	rbm4.3	100	92.529	Seriola_lalandi_dorsalis
ENSAPOG00000002953	rbm4.3	100	96.264	ENSSPAG00000008062	rbm4.3	100	96.264	Stegastes_partitus
ENSAPOG00000002953	rbm4.3	97	69.139	ENSSPAG00000008041	rbm4.3	81	67.262	Stegastes_partitus
ENSAPOG00000002953	rbm4.3	100	86.000	ENSTRUG00000020901	rbm4.3	100	85.714	Takifugu_rubripes
ENSAPOG00000002953	rbm4.3	97	65.487	ENSTRUG00000023874	rbm4.3	96	68.235	Takifugu_rubripes
ENSAPOG00000002953	rbm4.3	100	82.184	ENSTNIG00000005668	rbm4.3	100	81.897	Tetraodon_nigroviridis
ENSAPOG00000002953	rbm4.3	100	76.989	ENSXCOG00000006001	rbm4.3	100	78.693	Xiphophorus_couchianus
ENSAPOG00000002953	rbm4.3	97	65.205	ENSXCOG00000005996	rbm4.3	97	65.598	Xiphophorus_couchianus
ENSAPOG00000002953	rbm4.3	100	76.989	ENSXMAG00000021997	rbm4.3	100	78.693	Xiphophorus_maculatus
ENSAPOG00000002953	rbm4.3	100	77.273	ENSXMAG00000011698	rbm4.3	100	79.261	Xiphophorus_maculatus
ENSAPOG00000002953	rbm4.3	97	64.826	ENSXMAG00000025173	rbm4.3	99	65.156	Xiphophorus_maculatus