EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000003185 (Gene tree)
Gene ID: 110949814
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 65115 bases
Position: chrMVNR01000008.1:1782740-1847854
Accession: 110949814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001725	ResIII	PF04851.15	1.2e-07	1	1
ENSAPOP00000001748	ResIII	PF04851.15	6.1e-07	1	1
ENSAPOP00000001762	ResIII	PF04851.15	6.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014620	-	8937	XM_022192078	ENSAPOP00000001748	1570 (aa)	XP_022047770	UPI000B8F9CED
ENSAPOT00000014657	-	3780	-	ENSAPOP00000001725	1259 (aa)	-	-
ENSAPOT00000014590	-	9021	XM_022192068	ENSAPOP00000001762	1598 (aa)	XP_022047760	UPI000B90382C

Gene Model

Click here to download ENSAPOG00000003185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000003185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000003185	si:ch73-63e15.2	74	61.647	ENSAPOG00000003196	sbno1	80	64.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000003185	si:ch73-63e15.2	87	67.892	ENSG00000064932	SBNO2	87	69.384	Homo_sapiens
ENSAPOG00000003185	si:ch73-63e15.2	100	96.185	ENSAOCG00000016581	si:ch73-63e15.2	100	96.185	Amphiprion_ocellaris
ENSAPOG00000003185	si:ch73-63e15.2	100	96.373	ENSAPEG00000008862	si:ch73-63e15.2	100	96.373	Amphiprion_percula
ENSAPOG00000003185	si:ch73-63e15.2	100	83.784	ENSATEG00000023838	si:ch73-63e15.2	99	88.563	Anabas_testudineus
ENSAPOG00000003185	si:ch73-63e15.2	88	70.730	ENSAPLG00000007158	SBNO2	89	72.947	Anas_platyrhynchos
ENSAPOG00000003185	si:ch73-63e15.2	87	67.102	ENSANAG00000026685	SBNO2	88	68.517	Aotus_nancymaae
ENSAPOG00000003185	si:ch73-63e15.2	100	82.039	ENSACLG00000005090	si:ch73-63e15.2	100	82.214	Astatotilapia_calliptera
ENSAPOG00000003185	si:ch73-63e15.2	92	78.057	ENSAMXG00000018868	sbno2a	99	78.000	Astyanax_mexicanus
ENSAPOG00000003185	si:ch73-63e15.2	91	78.024	ENSAMXG00000015881	si:ch73-63e15.2	84	81.708	Astyanax_mexicanus
ENSAPOG00000003185	si:ch73-63e15.2	88	68.534	ENSBTAG00000020780	SBNO2	87	70.200	Bos_taurus
ENSAPOG00000003185	si:ch73-63e15.2	87	68.914	ENSCAFG00000019543	SBNO2	90	66.454	Canis_familiaris
ENSAPOG00000003185	si:ch73-63e15.2	87	68.914	ENSCAFG00020017115	SBNO2	95	66.454	Canis_lupus_dingo
ENSAPOG00000003185	si:ch73-63e15.2	88	68.276	ENSCHIG00000026127	SBNO2	90	66.428	Capra_hircus
ENSAPOG00000003185	si:ch73-63e15.2	87	65.734	ENSCAPG00000005731	SBNO2	94	67.276	Cavia_aperea
ENSAPOG00000003185	si:ch73-63e15.2	87	65.625	ENSCPOG00000007477	SBNO2	87	66.752	Cavia_porcellus
ENSAPOG00000003185	si:ch73-63e15.2	88	66.926	ENSCCAG00000037518	SBNO2	88	68.517	Cebus_capucinus
ENSAPOG00000003185	si:ch73-63e15.2	87	68.035	ENSCATG00000037046	SBNO2	87	69.471	Cercocebus_atys
ENSAPOG00000003185	si:ch73-63e15.2	89	66.437	ENSCLAG00000010178	SBNO2	99	69.177	Chinchilla_lanigera
ENSAPOG00000003185	si:ch73-63e15.2	87	67.948	ENSCSAG00000012317	SBNO2	90	65.655	Chlorocebus_sabaeus
ENSAPOG00000003185	si:ch73-63e15.2	88	69.755	ENSCPBG00000008920	SBNO2	79	83.372	Chrysemys_picta_bellii
ENSAPOG00000003185	si:ch73-63e15.2	83	67.427	ENSCANG00000036745	SBNO2	95	68.931	Colobus_angolensis_palliatus
ENSAPOG00000003185	si:ch73-63e15.2	87	66.579	ENSCGRG00001023960	Sbno2	85	67.907	Cricetulus_griseus_chok1gshd
ENSAPOG00000003185	si:ch73-63e15.2	87	67.916	ENSCGRG00000011984	Sbno2	85	69.231	Cricetulus_griseus_crigri
ENSAPOG00000003185	si:ch73-63e15.2	90	88.754	ENSCSEG00000006856	si:ch73-63e15.2	97	91.304	Cynoglossus_semilaevis
ENSAPOG00000003185	si:ch73-63e15.2	100	78.864	ENSCVAG00000005663	si:ch73-63e15.2	100	79.095	Cyprinodon_variegatus
ENSAPOG00000003185	si:ch73-63e15.2	95	72.022	ENSDARG00000098801	sbno2a	92	77.147	Danio_rerio
ENSAPOG00000003185	si:ch73-63e15.2	93	75.745	ENSDARG00000016188	SBNO2	98	79.631	Danio_rerio
ENSAPOG00000003185	si:ch73-63e15.2	87	68.536	ENSDORG00000002916	Sbno2	90	66.374	Dipodomys_ordii
ENSAPOG00000003185	si:ch73-63e15.2	88	68.107	ENSEASG00005021621	SBNO2	88	69.356	Equus_asinus_asinus
ENSAPOG00000003185	si:ch73-63e15.2	88	68.194	ENSECAG00000011827	SBNO2	88	69.442	Equus_caballus
ENSAPOG00000003185	si:ch73-63e15.2	92	86.137	ENSELUG00000020457	si:ch73-63e15.2	97	86.624	Esox_lucius
ENSAPOG00000003185	si:ch73-63e15.2	88	70.790	ENSFALG00000013988	SBNO2	92	68.813	Ficedula_albicollis
ENSAPOG00000003185	si:ch73-63e15.2	85	65.681	ENSFDAG00000015186	SBNO2	86	67.432	Fukomys_damarensis
ENSAPOG00000003185	si:ch73-63e15.2	100	80.074	ENSFHEG00000022262	si:ch73-63e15.2	88	84.081	Fundulus_heteroclitus
ENSAPOG00000003185	si:ch73-63e15.2	88	86.256	ENSGMOG00000007542	si:ch73-63e15.2	96	88.734	Gadus_morhua
ENSAPOG00000003185	si:ch73-63e15.2	90	70.034	ENSGALG00000037522	SBNO2	90	68.807	Gallus_gallus
ENSAPOG00000003185	si:ch73-63e15.2	96	84.121	ENSGAFG00000004860	si:ch73-63e15.2	93	90.137	Gambusia_affinis
ENSAPOG00000003185	si:ch73-63e15.2	87	88.425	ENSGACG00000013190	si:ch73-63e15.2	95	92.087	Gasterosteus_aculeatus
ENSAPOG00000003185	si:ch73-63e15.2	90	70.678	ENSGAGG00000008348	SBNO2	89	71.053	Gopherus_agassizii
ENSAPOG00000003185	si:ch73-63e15.2	100	81.976	ENSHBUG00000010742	si:ch73-63e15.2	100	82.777	Haplochromis_burtoni
ENSAPOG00000003185	si:ch73-63e15.2	86	67.691	ENSHGLG00000008739	SBNO2	85	68.793	Heterocephalus_glaber_female
ENSAPOG00000003185	si:ch73-63e15.2	87	67.629	ENSHGLG00100005269	SBNO2	99	69.017	Heterocephalus_glaber_male
ENSAPOG00000003185	si:ch73-63e15.2	93	84.403	ENSHCOG00000000884	si:ch73-63e15.2	96	85.066	Hippocampus_comes
ENSAPOG00000003185	si:ch73-63e15.2	90	78.299	ENSIPUG00000000537	si:ch73-63e15.2	86	79.966	Ictalurus_punctatus
ENSAPOG00000003185	si:ch73-63e15.2	95	73.802	ENSIPUG00000019672	sbno2	99	77.878	Ictalurus_punctatus
ENSAPOG00000003185	si:ch73-63e15.2	87	68.241	ENSSTOG00000025832	SBNO2	90	66.426	Ictidomys_tridecemlineatus
ENSAPOG00000003185	si:ch73-63e15.2	88	64.879	ENSJJAG00000017397	Sbno2	91	63.121	Jaculus_jaculus
ENSAPOG00000003185	si:ch73-63e15.2	100	81.626	ENSKMAG00000005541	si:ch73-63e15.2	100	81.688	Kryptolebias_marmoratus
ENSAPOG00000003185	si:ch73-63e15.2	90	91.746	ENSLBEG00000025016	si:ch73-63e15.2	99	94.264	Labrus_bergylta
ENSAPOG00000003185	si:ch73-63e15.2	93	81.083	ENSLOCG00000004643	si:ch73-63e15.2	89	86.147	Lepisosteus_oculatus
ENSAPOG00000003185	si:ch73-63e15.2	86	64.305	ENSLAFG00000008824	SBNO2	89	65.817	Loxodonta_africana
ENSAPOG00000003185	si:ch73-63e15.2	87	66.346	ENSMFAG00000040030	SBNO2	89	67.851	Macaca_fascicularis
ENSAPOG00000003185	si:ch73-63e15.2	87	67.948	ENSMMUG00000010886	SBNO2	90	65.655	Macaca_mulatta
ENSAPOG00000003185	si:ch73-63e15.2	87	68.035	ENSMNEG00000039927	SBNO2	87	69.471	Macaca_nemestrina
ENSAPOG00000003185	si:ch73-63e15.2	80	68.246	ENSMLEG00000038556	SBNO2	97	66.007	Mandrillus_leucophaeus
ENSAPOG00000003185	si:ch73-63e15.2	100	84.889	ENSMAMG00000018758	si:ch73-63e15.2	100	84.979	Mastacembelus_armatus
ENSAPOG00000003185	si:ch73-63e15.2	100	82.027	ENSMZEG00005010682	si:ch73-63e15.2	100	82.203	Maylandia_zebra
ENSAPOG00000003185	si:ch73-63e15.2	87	70.761	ENSMGAG00000003801	SBNO2	89	72.837	Meleagris_gallopavo
ENSAPOG00000003185	si:ch73-63e15.2	88	68.000	ENSMAUG00000008034	Sbno2	91	66.348	Mesocricetus_auratus
ENSAPOG00000003185	si:ch73-63e15.2	88	67.012	ENSMICG00000013071	SBNO2	88	68.977	Microcebus_murinus
ENSAPOG00000003185	si:ch73-63e15.2	88	68.111	ENSMOCG00000010504	Sbno2	85	69.603	Microtus_ochrogaster
ENSAPOG00000003185	si:ch73-63e15.2	87	69.497	ENSMODG00000005382	SBNO2	89	67.670	Monodelphis_domestica
ENSAPOG00000003185	si:ch73-63e15.2	75	85.100	ENSMALG00000021831	si:ch73-63e15.2	99	85.213	Monopterus_albus
ENSAPOG00000003185	si:ch73-63e15.2	88	67.767	ENSMUSG00000035673	Sbno2	97	66.830	Mus_musculus
ENSAPOG00000003185	si:ch73-63e15.2	88	67.680	MGP_PahariEiJ_G0030976	Sbno2	88	66.803	Mus_pahari
ENSAPOG00000003185	si:ch73-63e15.2	88	67.941	MGP_SPRETEiJ_G0016381	Sbno2	94	66.993	Mus_spretus
ENSAPOG00000003185	si:ch73-63e15.2	74	70.061	ENSMPUG00000008747	SBNO2	91	71.643	Mustela_putorius_furo
ENSAPOG00000003185	si:ch73-63e15.2	87	67.426	ENSNGAG00000004308	Sbno2	86	68.739	Nannospalax_galili
ENSAPOG00000003185	si:ch73-63e15.2	93	82.422	ENSNBRG00000022968	si:ch73-63e15.2	99	90.888	Neolamprologus_brichardi
ENSAPOG00000003185	si:ch73-63e15.2	82	70.449	ENSNLEG00000001305	SBNO2	89	70.449	Nomascus_leucogenys
ENSAPOG00000003185	si:ch73-63e15.2	72	66.066	ENSMEUG00000013511	-	78	67.550	Notamacropus_eugenii
ENSAPOG00000003185	si:ch73-63e15.2	87	67.222	ENSOPRG00000017238	SBNO2	94	69.014	Ochotona_princeps
ENSAPOG00000003185	si:ch73-63e15.2	87	67.311	ENSODEG00000011822	SBNO2	86	67.670	Octodon_degus
ENSAPOG00000003185	si:ch73-63e15.2	100	83.022	ENSONIG00000002490	si:ch73-63e15.2	99	89.505	Oreochromis_niloticus
ENSAPOG00000003185	si:ch73-63e15.2	100	79.094	ENSORLG00000000913	si:ch73-63e15.2	99	79.662	Oryzias_latipes
ENSAPOG00000003185	si:ch73-63e15.2	100	79.419	ENSORLG00020010978	si:ch73-63e15.2	100	79.140	Oryzias_latipes_hni
ENSAPOG00000003185	si:ch73-63e15.2	100	79.032	ENSORLG00015000202	si:ch73-63e15.2	100	79.140	Oryzias_latipes_hsok
ENSAPOG00000003185	si:ch73-63e15.2	100	79.924	ENSOMEG00000000359	si:ch73-63e15.2	100	79.319	Oryzias_melastigma
ENSAPOG00000003185	si:ch73-63e15.2	88	65.603	ENSOARG00000011130	SBNO2	86	67.271	Ovis_aries
ENSAPOG00000003185	si:ch73-63e15.2	87	67.042	ENSPPAG00000032482	SBNO2	90	68.444	Pan_paniscus
ENSAPOG00000003185	si:ch73-63e15.2	87	67.979	ENSPTRG00000010185	SBNO2	88	69.430	Pan_troglodytes
ENSAPOG00000003185	si:ch73-63e15.2	87	64.541	ENSPANG00000009658	SBNO2	87	65.742	Papio_anubis
ENSAPOG00000003185	si:ch73-63e15.2	90	81.678	ENSPKIG00000024201	si:ch73-63e15.2	84	83.348	Paramormyrops_kingsleyae
ENSAPOG00000003185	si:ch73-63e15.2	88	73.002	ENSPKIG00000009707	-	93	73.002	Paramormyrops_kingsleyae
ENSAPOG00000003185	si:ch73-63e15.2	73	71.617	ENSPSIG00000002852	SBNO2	99	73.631	Pelodiscus_sinensis
ENSAPOG00000003185	si:ch73-63e15.2	93	86.072	ENSPMGG00000014375	si:ch73-63e15.2	94	85.655	Periophthalmus_magnuspinnatus
ENSAPOG00000003185	si:ch73-63e15.2	88	65.969	ENSPEMG00000024122	Sbno2	88	65.913	Peromyscus_maniculatus_bairdii
ENSAPOG00000003185	si:ch73-63e15.2	85	71.145	ENSPCIG00000011264	SBNO2	89	68.277	Phascolarctos_cinereus
ENSAPOG00000003185	si:ch73-63e15.2	93	85.952	ENSPFOG00000004096	si:ch73-63e15.2	100	88.525	Poecilia_formosa
ENSAPOG00000003185	si:ch73-63e15.2	93	85.869	ENSPLAG00000014653	si:ch73-63e15.2	100	78.788	Poecilia_latipinna
ENSAPOG00000003185	si:ch73-63e15.2	93	87.162	ENSPMEG00000002129	si:ch73-63e15.2	96	86.917	Poecilia_mexicana
ENSAPOG00000003185	si:ch73-63e15.2	93	86.605	ENSPREG00000006755	si:ch73-63e15.2	100	78.768	Poecilia_reticulata
ENSAPOG00000003185	si:ch73-63e15.2	80	69.015	ENSPCAG00000012256	SBNO2	79	68.779	Procavia_capensis
ENSAPOG00000003185	si:ch73-63e15.2	88	62.738	ENSPCOG00000015216	SBNO2	90	60.734	Propithecus_coquereli
ENSAPOG00000003185	si:ch73-63e15.2	100	82.152	ENSPNYG00000019926	si:ch73-63e15.2	100	82.896	Pundamilia_nyererei
ENSAPOG00000003185	si:ch73-63e15.2	92	78.217	ENSPNAG00000026609	sbno2a	99	71.525	Pygocentrus_nattereri
ENSAPOG00000003185	si:ch73-63e15.2	91	79.470	ENSPNAG00000020260	si:ch73-63e15.2	87	80.613	Pygocentrus_nattereri
ENSAPOG00000003185	si:ch73-63e15.2	88	68.261	ENSRNOG00000013987	Sbno2	89	69.939	Rattus_norvegicus
ENSAPOG00000003185	si:ch73-63e15.2	80	67.176	ENSRBIG00000009740	SBNO2	86	68.381	Rhinopithecus_bieti
ENSAPOG00000003185	si:ch73-63e15.2	76	69.865	ENSRROG00000044671	SBNO2	85	71.498	Rhinopithecus_roxellana
ENSAPOG00000003185	si:ch73-63e15.2	87	67.395	ENSSBOG00000023562	SBNO2	88	68.517	Saimiri_boliviensis_boliviensis
ENSAPOG00000003185	si:ch73-63e15.2	85	70.079	ENSSHAG00000010241	SBNO2	99	70.923	Sarcophilus_harrisii
ENSAPOG00000003185	si:ch73-63e15.2	90	79.673	ENSSFOG00015005861	si:ch73-63e15.2	98	82.168	Scleropages_formosus
ENSAPOG00000003185	si:ch73-63e15.2	100	88.203	ENSSMAG00000012489	si:ch73-63e15.2	100	88.509	Scophthalmus_maximus
ENSAPOG00000003185	si:ch73-63e15.2	100	88.253	ENSSDUG00000003527	si:ch73-63e15.2	100	88.454	Seriola_dumerili
ENSAPOG00000003185	si:ch73-63e15.2	100	88.645	ENSSLDG00000004623	si:ch73-63e15.2	100	88.393	Seriola_lalandi_dorsalis
ENSAPOG00000003185	si:ch73-63e15.2	95	91.683	ENSSPAG00000017717	si:ch73-63e15.2	99	91.880	Stegastes_partitus
ENSAPOG00000003185	si:ch73-63e15.2	88	67.903	ENSSSCG00000030042	SBNO2	89	69.705	Sus_scrofa
ENSAPOG00000003185	si:ch73-63e15.2	85	89.234	ENSTRUG00000018193	si:ch73-63e15.2	86	90.859	Takifugu_rubripes
ENSAPOG00000003185	si:ch73-63e15.2	82	66.972	ENSUAMG00000006568	SBNO2	93	71.824	Ursus_americanus
ENSAPOG00000003185	si:ch73-63e15.2	87	69.002	ENSVVUG00000022823	SBNO2	89	66.454	Vulpes_vulpes
ENSAPOG00000003185	si:ch73-63e15.2	81	71.717	ENSXETG00000021579	sbno2	91	75.354	Xenopus_tropicalis
ENSAPOG00000003185	si:ch73-63e15.2	83	90.097	ENSXCOG00000009209	si:ch73-63e15.2	94	90.097	Xiphophorus_couchianus
ENSAPOG00000003185	si:ch73-63e15.2	93	86.993	ENSXMAG00000012091	si:ch73-63e15.2	91	90.274	Xiphophorus_maculatus