EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000003197 (Gene tree)
Gene ID: 110961180
Gene Symbol: rbfox1
Alias: a2bp1|zgc:103635
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 190756 bases
Position: chrMVNR01000875.1:10282-201037
Accession: 110961180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001853	Fox-1_C	PF12414.8	6.8e-43	1	1
ENSAPOP00000001825	Fox-1_C	PF12414.8	6.9e-43	1	1
ENSAPOP00000001842	Fox-1_C	PF12414.8	7.5e-43	1	1
ENSAPOP00000001842	RRM_1	PF00076.22	1.4e-17	1	1
ENSAPOP00000001853	RRM_1	PF00076.22	2.9e-17	1	1
ENSAPOP00000001825	RRM_1	PF00076.22	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014467	-	5911	XM_022208692	ENSAPOP00000001842	411 (aa)	XP_022064384	UPI000B8F9E0C
ENSAPOT00000014449	-	5518	XM_022208695	ENSAPOP00000001853	388 (aa)	XP_022064387	UPI000B8F3B47
ENSAPOT00000014494	-	5756	XM_022208694	ENSAPOP00000001825	390 (aa)	XP_022064386	UPI000B8F0341

Gene Model

Click here to download ENSAPOG00000003197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000003197's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000003197	rbfox1	98	65.092	ENSAPOG00000021630	rbfox3b	95	66.393
ENSAPOG00000003197	rbfox1	87	58.651	ENSAPOG00000015658	-	85	61.812
ENSAPOG00000003197	rbfox1	73	61.392	ENSAPOG00000004877	rbfox2	63	62.658
ENSAPOG00000003197	rbfox1	56	70.354	ENSAPOG00000016304	rbfox1l	61	69.099
ENSAPOG00000003197	rbfox1	98	49.515	ENSAPOG00000021561	-	90	51.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000003197	rbfox1	100	81.701	ENSG00000078328	RBFOX1	100	81.186	Homo_sapiens
ENSAPOG00000003197	rbfox1	61	72.881	ENSAMEG00000008605	RBFOX1	93	71.200	Ailuropoda_melanoleuca
ENSAPOG00000003197	rbfox1	68	71.478	ENSACIG00000005478	rbfox1	68	76.208	Amphilophus_citrinellus
ENSAPOG00000003197	rbfox1	74	98.966	ENSAOCG00000008283	rbfox1	99	98.966	Amphiprion_ocellaris
ENSAPOG00000003197	rbfox1	95	76.762	ENSAPEG00000010636	rbfox1	100	77.546	Amphiprion_percula
ENSAPOG00000003197	rbfox1	76	93.291	ENSATEG00000007513	rbfox1	100	93.291	Anabas_testudineus
ENSAPOG00000003197	rbfox1	99	76.271	ENSAPLG00000013263	RBFOX1	99	76.513	Anas_platyrhynchos
ENSAPOG00000003197	rbfox1	99	73.494	ENSACAG00000004013	RBFOX1	98	74.634	Anolis_carolinensis
ENSAPOG00000003197	rbfox1	98	81.890	ENSANAG00000029527	RBFOX1	97	81.842	Aotus_nancymaae
ENSAPOG00000003197	rbfox1	65	77.612	ENSAMXG00000002431	rbfox1	73	77.612	Astyanax_mexicanus
ENSAPOG00000003197	rbfox1	100	73.445	ENSBTAG00000007210	RBFOX1	100	73.684	Bos_taurus
ENSAPOG00000003197	rbfox1	98	80.105	ENSCJAG00000017351	RBFOX1	97	78.788	Callithrix_jacchus
ENSAPOG00000003197	rbfox1	98	74.328	ENSCAFG00000019082	RBFOX1	97	73.522	Canis_familiaris
ENSAPOG00000003197	rbfox1	67	68.293	ENSCAFG00020024881	RBFOX1	79	67.110	Canis_lupus_dingo
ENSAPOG00000003197	rbfox1	100	73.445	ENSCHIG00000023549	RBFOX1	100	73.684	Capra_hircus
ENSAPOG00000003197	rbfox1	98	82.058	ENSTSYG00000005334	RBFOX1	100	81.530	Carlito_syrichta
ENSAPOG00000003197	rbfox1	98	76.601	ENSCAPG00000017669	RBFOX1	100	76.108	Cavia_aperea
ENSAPOG00000003197	rbfox1	100	76.627	ENSCPOG00000011314	RBFOX1	100	76.145	Cavia_porcellus
ENSAPOG00000003197	rbfox1	98	81.890	ENSCCAG00000023031	RBFOX1	97	81.842	Cebus_capucinus
ENSAPOG00000003197	rbfox1	98	81.365	ENSCATG00000033816	RBFOX1	97	81.316	Cercocebus_atys
ENSAPOG00000003197	rbfox1	100	76.145	ENSCLAG00000012761	RBFOX1	100	75.663	Chinchilla_lanigera
ENSAPOG00000003197	rbfox1	85	71.588	ENSCSAG00000008739	RBFOX1	91	71.866	Chlorocebus_sabaeus
ENSAPOG00000003197	rbfox1	73	90.769	ENSCHOG00000012843	RBFOX1	67	90.769	Choloepus_hoffmanni
ENSAPOG00000003197	rbfox1	100	82.809	ENSCPBG00000026626	RBFOX1	96	83.051	Chrysemys_picta_bellii
ENSAPOG00000003197	rbfox1	98	81.365	ENSCANG00000033125	RBFOX1	97	81.316	Colobus_angolensis_palliatus
ENSAPOG00000003197	rbfox1	100	75.663	ENSCGRG00001013729	Rbfox1	100	75.181	Cricetulus_griseus_chok1gshd
ENSAPOG00000003197	rbfox1	100	75.663	ENSCGRG00000003272	Rbfox1	100	75.181	Cricetulus_griseus_crigri
ENSAPOG00000003197	rbfox1	95	85.135	ENSCSEG00000008840	rbfox1	100	84.865	Cynoglossus_semilaevis
ENSAPOG00000003197	rbfox1	100	83.033	ENSDARG00000014746	rbfox1	100	83.033	Danio_rerio
ENSAPOG00000003197	rbfox1	98	76.225	ENSDNOG00000043612	RBFOX1	99	73.333	Dasypus_novemcinctus
ENSAPOG00000003197	rbfox1	98	74.693	ENSDORG00000010024	Rbfox1	100	74.224	Dipodomys_ordii
ENSAPOG00000003197	rbfox1	98	64.059	ENSETEG00000003771	RBFOX1	97	62.884	Echinops_telfairi
ENSAPOG00000003197	rbfox1	100	77.045	ENSEASG00005011599	RBFOX1	100	74.402	Equus_asinus_asinus
ENSAPOG00000003197	rbfox1	100	76.359	ENSECAG00000012667	RBFOX1	96	76.596	Equus_caballus
ENSAPOG00000003197	rbfox1	100	56.701	ENSELUG00000013096	rbfox1	66	75.701	Esox_lucius
ENSAPOG00000003197	rbfox1	100	82.082	ENSFCAG00000025322	RBFOX1	96	81.598	Felis_catus
ENSAPOG00000003197	rbfox1	83	72.365	ENSFALG00000004027	RBFOX1	99	73.775	Ficedula_albicollis
ENSAPOG00000003197	rbfox1	100	76.386	ENSFDAG00000007388	RBFOX1	100	75.904	Fukomys_damarensis
ENSAPOG00000003197	rbfox1	98	74.146	ENSGALG00000034325	RBFOX1	98	71.526	Gallus_gallus
ENSAPOG00000003197	rbfox1	98	80.366	ENSGAGG00000023681	RBFOX1	100	77.665	Gopherus_agassizii
ENSAPOG00000003197	rbfox1	98	81.365	ENSGGOG00000016871	-	97	81.316	Gorilla_gorilla
ENSAPOG00000003197	rbfox1	100	76.386	ENSHGLG00000016944	RBFOX1	100	75.904	Heterocephalus_glaber_female
ENSAPOG00000003197	rbfox1	100	76.386	ENSHGLG00100003272	RBFOX1	100	75.904	Heterocephalus_glaber_male
ENSAPOG00000003197	rbfox1	84	84.894	ENSHCOG00000016419	rbfox1	91	85.196	Hippocampus_comes
ENSAPOG00000003197	rbfox1	95	83.106	ENSIPUG00000015215	rbfox1	100	84.196	Ictalurus_punctatus
ENSAPOG00000003197	rbfox1	100	76.627	ENSSTOG00000000322	RBFOX1	100	76.145	Ictidomys_tridecemlineatus
ENSAPOG00000003197	rbfox1	100	76.145	ENSJJAG00000002575	Rbfox1	100	75.181	Jaculus_jaculus
ENSAPOG00000003197	rbfox1	95	94.070	ENSLBEG00000014659	rbfox1	98	94.580	Labrus_bergylta
ENSAPOG00000003197	rbfox1	98	77.129	ENSLOCG00000006675	rbfox1	100	76.683	Lepisosteus_oculatus
ENSAPOG00000003197	rbfox1	72	83.172	ENSLAFG00000011480	RBFOX1	100	83.172	Loxodonta_africana
ENSAPOG00000003197	rbfox1	98	81.365	ENSMFAG00000036447	RBFOX1	97	81.316	Macaca_fascicularis
ENSAPOG00000003197	rbfox1	98	81.365	ENSMMUG00000003458	RBFOX1	97	81.316	Macaca_mulatta
ENSAPOG00000003197	rbfox1	98	73.839	ENSMNEG00000032034	RBFOX1	97	72.813	Macaca_nemestrina
ENSAPOG00000003197	rbfox1	98	81.365	ENSMLEG00000015382	RBFOX1	97	81.316	Mandrillus_leucophaeus
ENSAPOG00000003197	rbfox1	95	92.371	ENSMAMG00000003142	rbfox1	100	92.098	Mastacembelus_armatus
ENSAPOG00000003197	rbfox1	72	70.550	ENSMGAG00000008606	RBFOX1	98	70.066	Meleagris_gallopavo
ENSAPOG00000003197	rbfox1	99	42.786	ENSMAUG00000020570	Rbfox1	99	42.195	Mesocricetus_auratus
ENSAPOG00000003197	rbfox1	98	81.102	ENSMICG00000034286	RBFOX1	99	79.847	Microcebus_murinus
ENSAPOG00000003197	rbfox1	100	75.904	ENSMOCG00000020932	Rbfox1	100	76.145	Microtus_ochrogaster
ENSAPOG00000003197	rbfox1	84	85.627	ENSMMOG00000009716	rbfox1	86	83.486	Mola_mola
ENSAPOG00000003197	rbfox1	80	73.214	ENSMODG00000005826	RBFOX1	90	73.512	Monodelphis_domestica
ENSAPOG00000003197	rbfox1	100	92.214	ENSMALG00000003337	rbfox1	100	90.722	Monopterus_albus
ENSAPOG00000003197	rbfox1	100	75.904	MGP_CAROLIEiJ_G0020427	Rbfox1	100	75.422	Mus_caroli
ENSAPOG00000003197	rbfox1	100	76.145	ENSMUSG00000008658	Rbfox1	99	88.636	Mus_musculus
ENSAPOG00000003197	rbfox1	100	75.904	MGP_PahariEiJ_G0016135	Rbfox1	100	75.422	Mus_pahari
ENSAPOG00000003197	rbfox1	100	75.904	MGP_SPRETEiJ_G0021321	Rbfox1	100	76.145	Mus_spretus
ENSAPOG00000003197	rbfox1	83	71.920	ENSMPUG00000014822	RBFOX1	88	70.604	Mustela_putorius_furo
ENSAPOG00000003197	rbfox1	72	83.442	ENSMLUG00000015896	RBFOX1	100	83.442	Myotis_lucifugus
ENSAPOG00000003197	rbfox1	100	75.181	ENSNGAG00000023276	Rbfox1	100	75.616	Nannospalax_galili
ENSAPOG00000003197	rbfox1	98	70.443	ENSNBRG00000011084	rbfox1	95	70.098	Neolamprologus_brichardi
ENSAPOG00000003197	rbfox1	98	81.102	ENSNLEG00000010017	-	97	81.053	Nomascus_leucogenys
ENSAPOG00000003197	rbfox1	78	93.846	ENSMEUG00000012525	RBFOX1	71	93.846	Notamacropus_eugenii
ENSAPOG00000003197	rbfox1	87	72.881	ENSOPRG00000006199	-	81	68.797	Ochotona_princeps
ENSAPOG00000003197	rbfox1	100	76.627	ENSODEG00000013166	RBFOX1	100	76.145	Octodon_degus
ENSAPOG00000003197	rbfox1	85	71.309	ENSOANG00000002379	RBFOX1	91	71.588	Ornithorhynchus_anatinus
ENSAPOG00000003197	rbfox1	63	72.840	ENSOCUG00000001205	-	100	72.016	Oryctolagus_cuniculus
ENSAPOG00000003197	rbfox1	100	74.699	ENSOGAG00000025535	RBFOX1	100	74.217	Otolemur_garnettii
ENSAPOG00000003197	rbfox1	62	63.071	ENSOARG00000005135	RBFOX1	87	63.071	Ovis_aries
ENSAPOG00000003197	rbfox1	98	81.794	ENSPPAG00000036238	-	100	81.266	Pan_paniscus
ENSAPOG00000003197	rbfox1	98	81.627	ENSPPRG00000006546	RBFOX1	99	80.720	Panthera_pardus
ENSAPOG00000003197	rbfox1	100	68.939	ENSPTIG00000021154	RBFOX1	100	69.409	Panthera_tigris_altaica
ENSAPOG00000003197	rbfox1	98	81.365	ENSPTRG00000007744	RBFOX1	97	81.316	Pan_troglodytes
ENSAPOG00000003197	rbfox1	98	81.365	ENSPANG00000026500	RBFOX1	97	81.316	Papio_anubis
ENSAPOG00000003197	rbfox1	100	81.701	ENSPKIG00000009667	-	95	82.865	Paramormyrops_kingsleyae
ENSAPOG00000003197	rbfox1	76	80.635	ENSPKIG00000019353	rbfox1	89	80.635	Paramormyrops_kingsleyae
ENSAPOG00000003197	rbfox1	100	76.259	ENSPSIG00000006523	RBFOX1	100	76.499	Pelodiscus_sinensis
ENSAPOG00000003197	rbfox1	100	75.904	ENSPEMG00000017607	Rbfox1	100	75.422	Peromyscus_maniculatus_bairdii
ENSAPOG00000003197	rbfox1	68	79.655	ENSPCIG00000026887	RBFOX1	100	79.655	Phascolarctos_cinereus
ENSAPOG00000003197	rbfox1	83	72.206	ENSPPYG00000007079	-	88	70.604	Pongo_abelii
ENSAPOG00000003197	rbfox1	88	66.125	ENSPCAG00000002630	RBFOX1	97	64.491	Procavia_capensis
ENSAPOG00000003197	rbfox1	98	81.365	ENSPCOG00000025687	RBFOX1	99	80.102	Propithecus_coquereli
ENSAPOG00000003197	rbfox1	98	70.416	ENSPVAG00000013467	RBFOX1	97	69.504	Pteropus_vampyrus
ENSAPOG00000003197	rbfox1	95	80.311	ENSPNAG00000023109	rbfox1	100	79.793	Pygocentrus_nattereri
ENSAPOG00000003197	rbfox1	99	75.243	ENSRNOG00000002827	Rbfox1	97	73.697	Rattus_norvegicus
ENSAPOG00000003197	rbfox1	98	81.794	ENSRBIG00000044478	RBFOX1	100	81.266	Rhinopithecus_bieti
ENSAPOG00000003197	rbfox1	98	81.365	ENSRROG00000044411	RBFOX1	97	81.316	Rhinopithecus_roxellana
ENSAPOG00000003197	rbfox1	98	81.890	ENSSBOG00000033726	RBFOX1	97	81.842	Saimiri_boliviensis_boliviensis
ENSAPOG00000003197	rbfox1	100	75.663	ENSSHAG00000009257	RBFOX1	100	75.904	Sarcophilus_harrisii
ENSAPOG00000003197	rbfox1	88	72.141	ENSSFOG00015009955	-	85	71.143	Scleropages_formosus
ENSAPOG00000003197	rbfox1	100	68.462	ENSSFOG00015023675	rbfox1	100	67.005	Scleropages_formosus
ENSAPOG00000003197	rbfox1	100	95.631	ENSSMAG00000015505	rbfox1	100	95.631	Scophthalmus_maximus
ENSAPOG00000003197	rbfox1	100	90.769	ENSSDUG00000016413	rbfox1	100	90.769	Seriola_dumerili
ENSAPOG00000003197	rbfox1	81	95.783	ENSSLDG00000009353	rbfox1	98	95.783	Seriola_lalandi_dorsalis
ENSAPOG00000003197	rbfox1	84	76.970	ENSSPUG00000009732	RBFOX1	87	77.273	Sphenodon_punctatus
ENSAPOG00000003197	rbfox1	98	98.681	ENSSPAG00000009723	rbfox1	100	98.681	Stegastes_partitus
ENSAPOG00000003197	rbfox1	95	74.937	ENSSSCG00000007917	RBFOX1	94	74.083	Sus_scrofa
ENSAPOG00000003197	rbfox1	98	77.150	ENSTGUG00000004562	RBFOX1	100	77.641	Taeniopygia_guttata
ENSAPOG00000003197	rbfox1	98	93.473	ENSTRUG00000020940	rbfox1	100	93.734	Takifugu_rubripes
ENSAPOG00000003197	rbfox1	62	68.293	ENSTNIG00000002567	rbfox1	100	70.732	Tetraodon_nigroviridis
ENSAPOG00000003197	rbfox1	61	88.971	ENSTBEG00000009169	-	56	88.971	Tupaia_belangeri
ENSAPOG00000003197	rbfox1	98	73.839	ENSTTRG00000005700	RBFOX1	97	73.050	Tursiops_truncatus
ENSAPOG00000003197	rbfox1	100	69.880	ENSUAMG00000024633	RBFOX1	100	73.936	Ursus_americanus
ENSAPOG00000003197	rbfox1	100	66.080	ENSUMAG00000003579	RBFOX1	100	66.838	Ursus_maritimus
ENSAPOG00000003197	rbfox1	72	80.583	ENSVPAG00000001284	RBFOX1	74	80.583	Vicugna_pacos
ENSAPOG00000003197	rbfox1	100	82.324	ENSVVUG00000017311	RBFOX1	96	81.840	Vulpes_vulpes