EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000003301 (Gene tree)
Gene ID: 110948293
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Minus strand
Length: 27231 bases
Position: chrMVNR01000070.1:317909-345139
Accession: 110948293
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000001940	RRM_1	PF00076.22	3.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014292	-	4875	XM_022189753	ENSAPOP00000001940	249 (aa)	XP_022045445	UPI000B8F23D1

Gene Model

Click here to download ENSAPOG00000003301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000003301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000003301	rbm38	81	30.667	ENSAPOG00000023458	-	87	30.667
ENSAPOG00000003301	rbm38	62	69.375	ENSAPOG00000000789	rbm24b	100	56.000
ENSAPOG00000003301	rbm38	98	65.079	ENSAPOG00000009939	-	100	66.403
ENSAPOG00000003301	rbm38	72	31.188	ENSAPOG00000003191	MSI1	80	31.188
ENSAPOG00000003301	rbm38	54	74.815	ENSAPOG00000019514	rbm24a	100	55.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000003301	rbm38	91	59.052	ENSG00000132819	RBM38	94	82.051	Homo_sapiens
ENSAPOG00000003301	rbm38	98	64.940	ENSACIG00000012502	-	100	84.615	Amphilophus_citrinellus
ENSAPOG00000003301	rbm38	100	94.400	ENSACIG00000000010	rbm38	100	94.400	Amphilophus_citrinellus
ENSAPOG00000003301	rbm38	100	99.598	ENSAOCG00000013497	-	100	99.598	Amphiprion_ocellaris
ENSAPOG00000003301	rbm38	94	64.017	ENSAOCG00000012559	RBM38	98	65.833	Amphiprion_ocellaris
ENSAPOG00000003301	rbm38	100	99.598	ENSAPEG00000013137	rbm38	100	99.598	Amphiprion_percula
ENSAPOG00000003301	rbm38	98	64.286	ENSAPEG00000023581	-	100	64.683	Amphiprion_percula
ENSAPOG00000003301	rbm38	100	91.600	ENSATEG00000016366	rbm38	100	91.600	Anabas_testudineus
ENSAPOG00000003301	rbm38	98	65.339	ENSATEG00000016710	-	100	65.354	Anabas_testudineus
ENSAPOG00000003301	rbm38	93	58.228	ENSACAG00000016238	RBM38	90	58.228	Anolis_carolinensis
ENSAPOG00000003301	rbm38	93	59.072	ENSANAG00000031959	RBM38	81	85.859	Aotus_nancymaae
ENSAPOG00000003301	rbm38	98	64.567	ENSACLG00000019514	-	100	64.567	Astatotilapia_calliptera
ENSAPOG00000003301	rbm38	98	61.044	ENSAMXG00000015601	-	100	61.446	Astyanax_mexicanus
ENSAPOG00000003301	rbm38	95	56.540	ENSAMXG00000038120	rbm38	96	56.540	Astyanax_mexicanus
ENSAPOG00000003301	rbm38	91	59.483	ENSBTAG00000008105	RBM38	89	59.483	Bos_taurus
ENSAPOG00000003301	rbm38	58	59.310	WBGene00006321	sup-12	68	71.569	Caenorhabditis_elegans
ENSAPOG00000003301	rbm38	91	58.621	ENSCJAG00000019139	RBM38	81	85.859	Callithrix_jacchus
ENSAPOG00000003301	rbm38	91	59.483	ENSCAFG00020021943	RBM38	89	59.483	Canis_lupus_dingo
ENSAPOG00000003301	rbm38	91	58.621	ENSCHIG00000002609	RBM38	89	58.621	Capra_hircus
ENSAPOG00000003301	rbm38	91	59.914	ENSCPOG00000012781	RBM38	89	59.914	Cavia_porcellus
ENSAPOG00000003301	rbm38	91	58.621	ENSCCAG00000036872	RBM38	81	85.859	Cebus_capucinus
ENSAPOG00000003301	rbm38	91	59.483	ENSCATG00000032133	RBM38	81	85.859	Cercocebus_atys
ENSAPOG00000003301	rbm38	93	59.072	ENSCLAG00000005906	RBM38	94	59.072	Chinchilla_lanigera
ENSAPOG00000003301	rbm38	91	59.483	ENSCSAG00000015503	RBM38	89	59.483	Chlorocebus_sabaeus
ENSAPOG00000003301	rbm38	93	58.824	ENSCPBG00000024059	RBM38	100	58.824	Chrysemys_picta_bellii
ENSAPOG00000003301	rbm38	60	62.893	ENSCING00000025102	-	66	62.893	Ciona_intestinalis
ENSAPOG00000003301	rbm38	61	60.127	ENSCSAVG00000001132	-	58	60.127	Ciona_savignyi
ENSAPOG00000003301	rbm38	94	46.383	ENSCANG00000030105	-	80	46.383	Colobus_angolensis_palliatus
ENSAPOG00000003301	rbm38	72	65.574	ENSCGRG00001012928	Rbm38	89	58.621	Cricetulus_griseus_chok1gshd
ENSAPOG00000003301	rbm38	98	64.143	ENSCSEG00000004701	-	100	64.173	Cynoglossus_semilaevis
ENSAPOG00000003301	rbm38	84	69.856	ENSCSEG00000020943	rbm38	68	69.856	Cynoglossus_semilaevis
ENSAPOG00000003301	rbm38	98	64.542	ENSCVAG00000005472	-	100	65.737	Cyprinodon_variegatus
ENSAPOG00000003301	rbm38	100	87.600	ENSCVAG00000015952	rbm38	100	87.600	Cyprinodon_variegatus
ENSAPOG00000003301	rbm38	98	65.587	ENSDARG00000058818	rbm38	100	65.587	Danio_rerio
ENSAPOG00000003301	rbm38	93	57.384	ENSDNOG00000032004	RBM38	100	57.384	Dasypus_novemcinctus
ENSAPOG00000003301	rbm38	91	58.190	ENSECAG00000007700	RBM38	89	58.190	Equus_caballus
ENSAPOG00000003301	rbm38	91	60.173	ENSEEUG00000013489	RBM38	89	61.039	Erinaceus_europaeus
ENSAPOG00000003301	rbm38	92	73.913	ENSELUG00000000585	-	100	73.913	Esox_lucius
ENSAPOG00000003301	rbm38	98	65.490	ENSELUG00000005849	-	100	65.490	Esox_lucius
ENSAPOG00000003301	rbm38	91	58.621	ENSFCAG00000042916	RBM38	80	85.714	Felis_catus
ENSAPOG00000003301	rbm38	70	69.663	ENSFALG00000010805	RBM38	90	68.927	Ficedula_albicollis
ENSAPOG00000003301	rbm38	98	61.600	ENSFHEG00000006160	-	100	62.353	Fundulus_heteroclitus
ENSAPOG00000003301	rbm38	100	88.048	ENSFHEG00000017748	rbm38	100	88.048	Fundulus_heteroclitus
ENSAPOG00000003301	rbm38	76	70.157	ENSGMOG00000016655	-	100	72.775	Gadus_morhua
ENSAPOG00000003301	rbm38	93	57.983	ENSGALG00000026081	RBM38	100	57.384	Gallus_gallus
ENSAPOG00000003301	rbm38	93	63.136	ENSGACG00000009873	-	100	63.136	Gasterosteus_aculeatus
ENSAPOG00000003301	rbm38	93	81.466	ENSGACG00000015224	rbm38	100	81.466	Gasterosteus_aculeatus
ENSAPOG00000003301	rbm38	93	59.244	ENSGAGG00000001187	RBM38	100	59.244	Gopherus_agassizii
ENSAPOG00000003301	rbm38	98	64.567	ENSHBUG00000011778	-	100	64.567	Haplochromis_burtoni
ENSAPOG00000003301	rbm38	100	94.400	ENSHBUG00000012058	rbm38	100	94.400	Haplochromis_burtoni
ENSAPOG00000003301	rbm38	93	59.072	ENSHGLG00000015077	RBM38	90	59.072	Heterocephalus_glaber_female
ENSAPOG00000003301	rbm38	86	67.130	ENSHCOG00000005622	-	60	68.056	Hippocampus_comes
ENSAPOG00000003301	rbm38	100	64.542	ENSHCOG00000019040	rbm38	100	64.542	Hippocampus_comes
ENSAPOG00000003301	rbm38	98	60.241	ENSIPUG00000019349	-	100	60.241	Ictalurus_punctatus
ENSAPOG00000003301	rbm38	91	77.350	ENSKMAG00000012402	rbm38	99	77.350	Kryptolebias_marmoratus
ENSAPOG00000003301	rbm38	100	92.400	ENSLBEG00000018878	rbm38	100	92.400	Labrus_bergylta
ENSAPOG00000003301	rbm38	98	64.400	ENSLBEG00000016163	RBM38	100	64.844	Labrus_bergylta
ENSAPOG00000003301	rbm38	98	64.516	ENSLOCG00000003456	rbm38	100	64.516	Lepisosteus_oculatus
ENSAPOG00000003301	rbm38	91	59.483	ENSMFAG00000043808	RBM38	81	85.859	Macaca_fascicularis
ENSAPOG00000003301	rbm38	91	59.483	ENSMMUG00000031391	RBM38	81	85.859	Macaca_mulatta
ENSAPOG00000003301	rbm38	91	59.483	ENSMNEG00000034683	RBM38	81	85.859	Macaca_nemestrina
ENSAPOG00000003301	rbm38	98	67.068	ENSMAMG00000020499	RBM38	100	67.589	Mastacembelus_armatus
ENSAPOG00000003301	rbm38	100	94.400	ENSMAMG00000024135	rbm38	100	94.400	Mastacembelus_armatus
ENSAPOG00000003301	rbm38	98	64.567	ENSMZEG00005000849	-	100	64.567	Maylandia_zebra
ENSAPOG00000003301	rbm38	100	94.400	ENSMZEG00005026036	rbm38	100	94.400	Maylandia_zebra
ENSAPOG00000003301	rbm38	72	66.120	ENSMAUG00000021211	Rbm38	89	59.483	Mesocricetus_auratus
ENSAPOG00000003301	rbm38	93	58.723	ENSMICG00000038011	RBM38	100	58.723	Microcebus_murinus
ENSAPOG00000003301	rbm38	72	66.120	ENSMOCG00000008715	Rbm38	89	59.483	Microtus_ochrogaster
ENSAPOG00000003301	rbm38	98	65.079	ENSMMOG00000020051	-	100	65.490	Mola_mola
ENSAPOG00000003301	rbm38	95	56.432	ENSMODG00000016458	RBM38	94	56.432	Monodelphis_domestica
ENSAPOG00000003301	rbm38	100	76.400	ENSMALG00000022327	rbm38	100	77.200	Monopterus_albus
ENSAPOG00000003301	rbm38	76	75.263	ENSMALG00000004680	RBM38	84	67.556	Monopterus_albus
ENSAPOG00000003301	rbm38	91	58.621	MGP_CAROLIEiJ_G0024745	Rbm38	89	58.621	Mus_caroli
ENSAPOG00000003301	rbm38	91	58.621	ENSMUSG00000027510	Rbm38	89	58.621	Mus_musculus
ENSAPOG00000003301	rbm38	91	58.621	MGP_PahariEiJ_G0026186	Rbm38	89	58.621	Mus_pahari
ENSAPOG00000003301	rbm38	91	58.621	MGP_SPRETEiJ_G0025665	Rbm38	89	58.621	Mus_spretus
ENSAPOG00000003301	rbm38	74	65.426	ENSMPUG00000006518	RBM38	98	63.415	Mustela_putorius_furo
ENSAPOG00000003301	rbm38	91	58.547	ENSMLUG00000011140	RBM38	98	58.547	Myotis_lucifugus
ENSAPOG00000003301	rbm38	100	94.000	ENSNBRG00000022685	rbm38	100	94.000	Neolamprologus_brichardi
ENSAPOG00000003301	rbm38	98	64.567	ENSNBRG00000022545	-	100	64.567	Neolamprologus_brichardi
ENSAPOG00000003301	rbm38	91	60.345	ENSODEG00000007980	RBM38	89	60.345	Octodon_degus
ENSAPOG00000003301	rbm38	98	64.427	ENSONIG00000020324	-	100	64.427	Oreochromis_niloticus
ENSAPOG00000003301	rbm38	98	94.694	ENSONIG00000017073	rbm38	100	94.694	Oreochromis_niloticus
ENSAPOG00000003301	rbm38	91	57.328	ENSOANG00000009259	RBM38	74	63.776	Ornithorhynchus_anatinus
ENSAPOG00000003301	rbm38	100	84.462	ENSORLG00000012154	rbm38	100	84.462	Oryzias_latipes
ENSAPOG00000003301	rbm38	98	62.846	ENSORLG00000027180	-	100	63.780	Oryzias_latipes
ENSAPOG00000003301	rbm38	100	85.259	ENSORLG00020017871	rbm38	100	85.259	Oryzias_latipes_hni
ENSAPOG00000003301	rbm38	100	62.257	ENSORLG00020020751	-	100	63.780	Oryzias_latipes_hni
ENSAPOG00000003301	rbm38	98	63.492	ENSORLG00015017040	-	100	64.173	Oryzias_latipes_hsok
ENSAPOG00000003301	rbm38	100	85.259	ENSORLG00015012606	rbm38	100	85.259	Oryzias_latipes_hsok
ENSAPOG00000003301	rbm38	100	85.259	ENSOMEG00000006805	rbm38	100	85.259	Oryzias_melastigma
ENSAPOG00000003301	rbm38	98	63.745	ENSOMEG00000023912	-	100	64.143	Oryzias_melastigma
ENSAPOG00000003301	rbm38	91	59.483	ENSOGAG00000029136	RBM38	88	59.483	Otolemur_garnettii
ENSAPOG00000003301	rbm38	91	58.621	ENSPPRG00000009507	RBM38	80	85.714	Panthera_pardus
ENSAPOG00000003301	rbm38	50	80.000	ENSPTRG00000045845	-	68	80.000	Pan_troglodytes
ENSAPOG00000003301	rbm38	76	64.583	ENSPTRG00000013661	RBM38	81	85.859	Pan_troglodytes
ENSAPOG00000003301	rbm38	95	47.521	ENSPANG00000033127	-	93	47.521	Papio_anubis
ENSAPOG00000003301	rbm38	91	59.483	ENSPANG00000020919	-	81	85.859	Papio_anubis
ENSAPOG00000003301	rbm38	98	60.317	ENSPKIG00000025417	rbm38	100	61.905	Paramormyrops_kingsleyae
ENSAPOG00000003301	rbm38	98	60.643	ENSPKIG00000018122	-	100	81.197	Paramormyrops_kingsleyae
ENSAPOG00000003301	rbm38	93	57.806	ENSPSIG00000011649	RBM38	92	57.806	Pelodiscus_sinensis
ENSAPOG00000003301	rbm38	100	80.478	ENSPMGG00000011343	rbm38	100	83.267	Periophthalmus_magnuspinnatus
ENSAPOG00000003301	rbm38	98	61.811	ENSPMGG00000017094	-	100	61.811	Periophthalmus_magnuspinnatus
ENSAPOG00000003301	rbm38	95	56.846	ENSPCIG00000013648	RBM38	94	56.846	Phascolarctos_cinereus
ENSAPOG00000003301	rbm38	100	89.764	ENSPFOG00000011658	rbm38	100	89.764	Poecilia_formosa
ENSAPOG00000003301	rbm38	100	89.370	ENSPLAG00000005218	rbm38	100	89.370	Poecilia_latipinna
ENSAPOG00000003301	rbm38	98	63.529	ENSPLAG00000002500	-	100	64.800	Poecilia_latipinna
ENSAPOG00000003301	rbm38	100	89.370	ENSPMEG00000015770	rbm38	100	89.370	Poecilia_mexicana
ENSAPOG00000003301	rbm38	100	89.370	ENSPREG00000007398	rbm38	100	89.370	Poecilia_reticulata
ENSAPOG00000003301	rbm38	91	59.565	ENSPCOG00000026201	RBM38	84	83.495	Propithecus_coquereli
ENSAPOG00000003301	rbm38	76	40.838	ENSPVAG00000006457	RBM38	92	38.750	Pteropus_vampyrus
ENSAPOG00000003301	rbm38	98	64.567	ENSPNYG00000019727	-	100	84.615	Pundamilia_nyererei
ENSAPOG00000003301	rbm38	100	94.000	ENSPNYG00000021373	rbm38	100	94.000	Pundamilia_nyererei
ENSAPOG00000003301	rbm38	98	62.651	ENSPNAG00000015123	-	91	82.203	Pygocentrus_nattereri
ENSAPOG00000003301	rbm38	81	67.488	ENSPNAG00000010596	rbm38	84	67.488	Pygocentrus_nattereri
ENSAPOG00000003301	rbm38	91	59.914	ENSRNOG00000006420	Rbm38	89	59.914	Rattus_norvegicus
ENSAPOG00000003301	rbm38	93	51.709	ENSRROG00000036388	-	89	51.709	Rhinopithecus_roxellana
ENSAPOG00000003301	rbm38	93	58.228	ENSSBOG00000031053	RBM38	92	85.859	Saimiri_boliviensis_boliviensis
ENSAPOG00000003301	rbm38	98	58.635	ENSSFOG00015004453	rbm38	100	62.651	Scleropages_formosus
ENSAPOG00000003301	rbm38	100	96.000	ENSSDUG00000022611	rbm38	100	96.000	Seriola_dumerili
ENSAPOG00000003301	rbm38	98	65.079	ENSSDUG00000021082	RBM38	100	65.490	Seriola_dumerili
ENSAPOG00000003301	rbm38	100	96.000	ENSSLDG00000010845	rbm38	100	96.000	Seriola_lalandi_dorsalis
ENSAPOG00000003301	rbm38	98	65.079	ENSSLDG00000011778	RBM38	100	65.490	Seriola_lalandi_dorsalis
ENSAPOG00000003301	rbm38	98	65.476	ENSSPAG00000020989	RBM38	100	65.476	Stegastes_partitus
ENSAPOG00000003301	rbm38	100	98.800	ENSSPAG00000011113	rbm38	100	98.800	Stegastes_partitus
ENSAPOG00000003301	rbm38	91	59.483	ENSSSCG00000007504	RBM38	89	59.483	Sus_scrofa
ENSAPOG00000003301	rbm38	98	62.846	ENSTRUG00000019869	-	100	63.889	Takifugu_rubripes
ENSAPOG00000003301	rbm38	100	85.600	ENSTRUG00000024954	rbm38	100	86.000	Takifugu_rubripes
ENSAPOG00000003301	rbm38	93	66.245	ENSTNIG00000007093	-	100	66.245	Tetraodon_nigroviridis
ENSAPOG00000003301	rbm38	91	59.052	ENSUAMG00000019780	RBM38	90	58.650	Ursus_americanus
ENSAPOG00000003301	rbm38	91	59.483	ENSVVUG00000017246	RBM38	89	59.483	Vulpes_vulpes
ENSAPOG00000003301	rbm38	77	62.564	ENSXETG00000011268	rbm38	99	56.432	Xenopus_tropicalis
ENSAPOG00000003301	rbm38	84	54.709	ENSXCOG00000017324	-	99	54.709	Xiphophorus_couchianus
ENSAPOG00000003301	rbm38	100	90.800	ENSXMAG00000023662	rbm38	100	90.800	Xiphophorus_maculatus