EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000003377 (Gene tree)
Gene ID: -
Gene Symbol: snrpf
Alias: snrpfl
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 4117 bases
Position: chrMVNR01002045.1:98538-102654
Accession: ZDB-GENE-040930-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000022281	LSM	PF01423.22	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014179	-	387	-	ENSAPOP00000022281	128 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000003377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000003377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000003377	snrpf	52	50.000	ENSAPOG00000019832	lsm6	83	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000003377	snrpf	66	97.647	ENSG00000139343	SNRPF	99	97.647	Homo_sapiens
ENSAPOG00000003377	snrpf	66	97.647	ENSAMEG00000002166	-	100	97.647	Ailuropoda_melanoleuca
ENSAPOG00000003377	snrpf	59	84.000	ENSAMEG00000018718	-	86	85.135	Ailuropoda_melanoleuca
ENSAPOG00000003377	snrpf	66	100.000	ENSACIG00000013216	snrpf	99	100.000	Amphilophus_citrinellus
ENSAPOG00000003377	snrpf	66	100.000	ENSAOCG00000015108	snrpf	99	100.000	Amphiprion_ocellaris
ENSAPOG00000003377	snrpf	66	100.000	ENSAPEG00000022022	snrpf	99	100.000	Amphiprion_percula
ENSAPOG00000003377	snrpf	67	97.674	ENSATEG00000022625	snrpf	92	97.674	Anabas_testudineus
ENSAPOG00000003377	snrpf	59	94.737	ENSACAG00000014073	SNRPF	87	94.737	Anolis_carolinensis
ENSAPOG00000003377	snrpf	66	97.647	ENSANAG00000032845	SNRPF	99	97.647	Aotus_nancymaae
ENSAPOG00000003377	snrpf	62	83.750	ENSANAG00000020297	-	73	83.750	Aotus_nancymaae
ENSAPOG00000003377	snrpf	59	66.667	ENSANAG00000025860	-	83	67.568	Aotus_nancymaae
ENSAPOG00000003377	snrpf	66	100.000	ENSACLG00000016066	snrpf	99	100.000	Astatotilapia_calliptera
ENSAPOG00000003377	snrpf	58	97.297	ENSAMXG00000007421	snrpf	86	97.297	Astyanax_mexicanus
ENSAPOG00000003377	snrpf	60	90.909	ENSBTAG00000050012	-	91	90.541	Bos_taurus
ENSAPOG00000003377	snrpf	66	97.647	ENSBTAG00000016271	SNRPF	99	97.647	Bos_taurus
ENSAPOG00000003377	snrpf	60	71.429	WBGene00004918	snr-5	85	73.611	Caenorhabditis_elegans
ENSAPOG00000003377	snrpf	66	97.647	ENSCJAG00000002705	-	99	97.647	Callithrix_jacchus
ENSAPOG00000003377	snrpf	66	97.647	ENSCAFG00000006395	-	77	97.647	Canis_familiaris
ENSAPOG00000003377	snrpf	55	91.549	ENSCAFG00000031151	-	85	91.781	Canis_familiaris
ENSAPOG00000003377	snrpf	61	85.897	ENSCAFG00020013161	-	74	94.286	Canis_lupus_dingo
ENSAPOG00000003377	snrpf	55	91.549	ENSCAFG00020010823	-	85	91.781	Canis_lupus_dingo
ENSAPOG00000003377	snrpf	63	92.500	ENSTSYG00000031636	-	61	93.151	Carlito_syrichta
ENSAPOG00000003377	snrpf	58	92.000	ENSTSYG00000036502	-	86	92.000	Carlito_syrichta
ENSAPOG00000003377	snrpf	58	83.784	ENSTSYG00000030635	-	86	83.784	Carlito_syrichta
ENSAPOG00000003377	snrpf	66	97.647	ENSCAPG00000007242	SNRPF	100	97.647	Cavia_aperea
ENSAPOG00000003377	snrpf	66	97.647	ENSCPOG00000013898	SNRPF	99	97.647	Cavia_porcellus
ENSAPOG00000003377	snrpf	66	96.471	ENSCCAG00000017356	-	99	96.471	Cebus_capucinus
ENSAPOG00000003377	snrpf	66	97.647	ENSCCAG00000037378	-	99	97.647	Cebus_capucinus
ENSAPOG00000003377	snrpf	84	74.766	ENSCCAG00000033627	-	72	73.958	Cebus_capucinus
ENSAPOG00000003377	snrpf	66	97.647	ENSCLAG00000007200	SNRPF	99	97.647	Chinchilla_lanigera
ENSAPOG00000003377	snrpf	76	77.320	ENSCSAG00000003602	-	79	77.320	Chlorocebus_sabaeus
ENSAPOG00000003377	snrpf	66	91.765	ENSCPBG00000024287	-	60	93.243	Chrysemys_picta_bellii
ENSAPOG00000003377	snrpf	66	87.059	ENSCPBG00000026463	-	86	87.838	Chrysemys_picta_bellii
ENSAPOG00000003377	snrpf	66	85.882	ENSCPBG00000001985	-	88	87.838	Chrysemys_picta_bellii
ENSAPOG00000003377	snrpf	58	89.189	ENSCPBG00000006227	-	86	89.189	Chrysemys_picta_bellii
ENSAPOG00000003377	snrpf	69	84.091	ENSCSAVG00000007498	-	88	85.714	Ciona_savignyi
ENSAPOG00000003377	snrpf	57	90.411	ENSCGRG00001008965	-	57	90.411	Cricetulus_griseus_chok1gshd
ENSAPOG00000003377	snrpf	66	97.647	ENSCGRG00001017100	-	99	97.647	Cricetulus_griseus_chok1gshd
ENSAPOG00000003377	snrpf	66	97.647	ENSCGRG00000000336	-	99	97.647	Cricetulus_griseus_crigri
ENSAPOG00000003377	snrpf	61	91.026	ENSCGRG00000018878	-	91	90.411	Cricetulus_griseus_crigri
ENSAPOG00000003377	snrpf	67	98.837	ENSCSEG00000004748	snrpf	99	98.824	Cynoglossus_semilaevis
ENSAPOG00000003377	snrpf	85	73.874	ENSCVAG00000000397	snrpf	88	73.874	Cyprinodon_variegatus
ENSAPOG00000003377	snrpf	66	97.701	ENSDARG00000105037	snrpf	99	97.701	Danio_rerio
ENSAPOG00000003377	snrpf	70	72.222	ENSDNOG00000049373	-	78	72.222	Dasypus_novemcinctus
ENSAPOG00000003377	snrpf	90	68.696	ENSDNOG00000043775	-	74	68.696	Dasypus_novemcinctus
ENSAPOG00000003377	snrpf	64	87.805	ENSDNOG00000048989	-	72	88.889	Dasypus_novemcinctus
ENSAPOG00000003377	snrpf	55	87.324	ENSDORG00000025351	-	99	87.324	Dipodomys_ordii
ENSAPOG00000003377	snrpf	66	76.471	FBgn0000426	SmF	84	79.730	Drosophila_melanogaster
ENSAPOG00000003377	snrpf	66	97.647	ENSETEG00000001558	-	99	97.647	Echinops_telfairi
ENSAPOG00000003377	snrpf	63	76.543	ENSEBUG00000001793	-	72	86.567	Eptatretus_burgeri
ENSAPOG00000003377	snrpf	91	69.231	ENSECAG00000019817	SNRPF	91	69.231	Equus_caballus
ENSAPOG00000003377	snrpf	66	97.647	ENSEEUG00000013509	SNRPF	100	97.647	Erinaceus_europaeus
ENSAPOG00000003377	snrpf	66	94.118	ENSELUG00000007737	RUXF	85	95.946	Esox_lucius
ENSAPOG00000003377	snrpf	66	97.647	ENSELUG00000003121	RUXF	99	97.647	Esox_lucius
ENSAPOG00000003377	snrpf	66	97.647	ENSFCAG00000029966	-	99	97.647	Felis_catus
ENSAPOG00000003377	snrpf	58	72.973	ENSFCAG00000021942	-	85	72.973	Felis_catus
ENSAPOG00000003377	snrpf	82	64.762	ENSFCAG00000031148	-	91	62.626	Felis_catus
ENSAPOG00000003377	snrpf	67	97.674	ENSFALG00000010799	SNRPF	100	97.674	Ficedula_albicollis
ENSAPOG00000003377	snrpf	66	97.647	ENSFDAG00000002831	-	99	97.647	Fukomys_damarensis
ENSAPOG00000003377	snrpf	66	94.118	ENSFHEG00000003240	snrpf	74	94.118	Fundulus_heteroclitus
ENSAPOG00000003377	snrpf	66	100.000	ENSGMOG00000007741	snrpf	100	100.000	Gadus_morhua
ENSAPOG00000003377	snrpf	66	97.647	ENSGALG00000011409	SNRPF	99	97.647	Gallus_gallus
ENSAPOG00000003377	snrpf	66	100.000	ENSGAFG00000016187	snrpf	97	100.000	Gambusia_affinis
ENSAPOG00000003377	snrpf	66	98.824	ENSGACG00000020055	snrpf	100	98.824	Gasterosteus_aculeatus
ENSAPOG00000003377	snrpf	70	84.270	ENSGAGG00000022991	-	87	85.897	Gopherus_agassizii
ENSAPOG00000003377	snrpf	58	90.541	ENSGAGG00000012945	-	68	91.892	Gopherus_agassizii
ENSAPOG00000003377	snrpf	53	83.824	ENSGAGG00000014132	-	82	83.824	Gopherus_agassizii
ENSAPOG00000003377	snrpf	66	97.647	ENSGGOG00000001127	-	99	97.647	Gorilla_gorilla
ENSAPOG00000003377	snrpf	65	78.313	ENSGGOG00000039936	-	82	75.676	Gorilla_gorilla
ENSAPOG00000003377	snrpf	61	74.359	ENSGGOG00000039564	-	89	72.973	Gorilla_gorilla
ENSAPOG00000003377	snrpf	66	97.647	ENSHGLG00000009108	SNRPF	99	97.647	Heterocephalus_glaber_female
ENSAPOG00000003377	snrpf	66	96.471	ENSHGLG00000021172	-	99	96.471	Heterocephalus_glaber_female
ENSAPOG00000003377	snrpf	66	97.647	ENSHGLG00100008103	-	100	97.647	Heterocephalus_glaber_male
ENSAPOG00000003377	snrpf	66	96.471	ENSHGLG00100019596	-	99	96.471	Heterocephalus_glaber_male
ENSAPOG00000003377	snrpf	66	100.000	ENSIPUG00000018994	snrpf	99	100.000	Ictalurus_punctatus
ENSAPOG00000003377	snrpf	66	97.647	ENSSTOG00000010434	-	99	97.647	Ictidomys_tridecemlineatus
ENSAPOG00000003377	snrpf	66	82.353	ENSJJAG00000010502	-	88	83.784	Jaculus_jaculus
ENSAPOG00000003377	snrpf	66	78.824	ENSJJAG00000004558	-	88	79.730	Jaculus_jaculus
ENSAPOG00000003377	snrpf	52	91.045	ENSJJAG00000004828	-	86	92.857	Jaculus_jaculus
ENSAPOG00000003377	snrpf	66	97.647	ENSJJAG00000011272	-	99	97.647	Jaculus_jaculus
ENSAPOG00000003377	snrpf	66	100.000	ENSKMAG00000013566	snrpf	98	100.000	Kryptolebias_marmoratus
ENSAPOG00000003377	snrpf	66	98.824	ENSLBEG00000008800	snrpf	99	98.824	Labrus_bergylta
ENSAPOG00000003377	snrpf	92	75.424	ENSLACG00000002456	-	100	75.424	Latimeria_chalumnae
ENSAPOG00000003377	snrpf	66	97.647	ENSLOCG00000015744	snrpf	99	97.647	Lepisosteus_oculatus
ENSAPOG00000003377	snrpf	67	97.674	ENSLAFG00000017426	SNRPF	100	97.674	Loxodonta_africana
ENSAPOG00000003377	snrpf	66	98.810	ENSMAMG00000016593	snrpf	99	98.810	Mastacembelus_armatus
ENSAPOG00000003377	snrpf	66	100.000	ENSMZEG00005014701	snrpf	99	100.000	Maylandia_zebra
ENSAPOG00000003377	snrpf	86	76.577	ENSMGAG00000011453	-	100	76.577	Meleagris_gallopavo
ENSAPOG00000003377	snrpf	59	92.000	ENSMAUG00000008799	-	86	93.243	Mesocricetus_auratus
ENSAPOG00000003377	snrpf	58	97.297	ENSMAUG00000016909	-	100	97.297	Mesocricetus_auratus
ENSAPOG00000003377	snrpf	58	97.297	ENSMAUG00000019737	-	100	97.297	Mesocricetus_auratus
ENSAPOG00000003377	snrpf	65	72.289	ENSMAUG00000010289	-	86	72.222	Mesocricetus_auratus
ENSAPOG00000003377	snrpf	66	97.647	ENSMICG00000012153	-	99	97.647	Microcebus_murinus
ENSAPOG00000003377	snrpf	64	82.927	ENSMICG00000030494	-	67	82.143	Microcebus_murinus
ENSAPOG00000003377	snrpf	66	97.647	ENSMOCG00000020437	Snrpf	99	97.647	Microtus_ochrogaster
ENSAPOG00000003377	snrpf	53	80.882	ENSMOCG00000020220	-	87	80.882	Microtus_ochrogaster
ENSAPOG00000003377	snrpf	58	83.784	ENSMOCG00000022166	-	81	83.784	Microtus_ochrogaster
ENSAPOG00000003377	snrpf	66	98.824	ENSMMOG00000007127	snrpf	100	98.824	Mola_mola
ENSAPOG00000003377	snrpf	66	97.647	ENSMODG00000008091	SNRPF	75	97.647	Monodelphis_domestica
ENSAPOG00000003377	snrpf	66	100.000	ENSMALG00000012328	snrpf	99	100.000	Monopterus_albus
ENSAPOG00000003377	snrpf	66	97.647	MGP_CAROLIEiJ_G0015735	-	99	97.647	Mus_caroli
ENSAPOG00000003377	snrpf	66	97.647	ENSMUSG00000020018	Snrpf	99	97.647	Mus_musculus
ENSAPOG00000003377	snrpf	66	97.647	MGP_PahariEiJ_G0031350	Snrpf	99	97.647	Mus_pahari
ENSAPOG00000003377	snrpf	66	97.647	MGP_SPRETEiJ_G0016553	Snrpf	99	97.647	Mus_spretus
ENSAPOG00000003377	snrpf	74	87.755	ENSMPUG00000007176	-	88	87.755	Mustela_putorius_furo
ENSAPOG00000003377	snrpf	74	82.105	ENSMLUG00000026149	-	90	82.105	Myotis_lucifugus
ENSAPOG00000003377	snrpf	66	78.824	ENSMLUG00000026269	-	70	77.027	Myotis_lucifugus
ENSAPOG00000003377	snrpf	66	97.647	ENSMLUG00000013577	-	100	97.647	Myotis_lucifugus
ENSAPOG00000003377	snrpf	74	82.105	ENSMLUG00000027932	-	90	82.105	Myotis_lucifugus
ENSAPOG00000003377	snrpf	74	82.105	ENSMLUG00000029201	-	90	82.105	Myotis_lucifugus
ENSAPOG00000003377	snrpf	66	97.647	ENSNGAG00000024292	-	99	97.647	Nannospalax_galili
ENSAPOG00000003377	snrpf	70	98.876	ENSNBRG00000011682	snrpf	91	98.876	Neolamprologus_brichardi
ENSAPOG00000003377	snrpf	58	70.270	ENSMEUG00000000671	SNRPF	87	70.270	Notamacropus_eugenii
ENSAPOG00000003377	snrpf	66	97.647	ENSODEG00000010328	-	99	97.647	Octodon_degus
ENSAPOG00000003377	snrpf	84	82.243	ENSOCUG00000010925	SNRPF	93	82.243	Oryctolagus_cuniculus
ENSAPOG00000003377	snrpf	58	97.297	ENSORLG00020008216	snrpf	87	97.297	Oryzias_latipes_hni
ENSAPOG00000003377	snrpf	58	97.297	ENSORLG00015007418	snrpf	87	97.297	Oryzias_latipes_hsok
ENSAPOG00000003377	snrpf	66	98.810	ENSOMEG00000003018	snrpf	99	98.810	Oryzias_melastigma
ENSAPOG00000003377	snrpf	58	95.946	ENSOGAG00000030323	-	86	95.946	Otolemur_garnettii
ENSAPOG00000003377	snrpf	85	78.761	ENSOARG00000011853	-	96	78.761	Ovis_aries
ENSAPOG00000003377	snrpf	65	78.313	ENSPPAG00000037544	-	82	75.676	Pan_paniscus
ENSAPOG00000003377	snrpf	61	74.359	ENSPPAG00000037479	-	89	72.973	Pan_paniscus
ENSAPOG00000003377	snrpf	65	74.699	ENSPPRG00000007449	-	76	74.324	Panthera_pardus
ENSAPOG00000003377	snrpf	66	97.647	ENSPPRG00000005875	-	99	97.647	Panthera_pardus
ENSAPOG00000003377	snrpf	65	77.108	ENSPTIG00000005117	-	88	74.324	Panthera_tigris_altaica
ENSAPOG00000003377	snrpf	66	97.647	ENSPTIG00000007520	SNRPF	99	97.647	Panthera_tigris_altaica
ENSAPOG00000003377	snrpf	61	74.359	ENSPTRG00000047717	-	89	72.973	Pan_troglodytes
ENSAPOG00000003377	snrpf	65	78.313	ENSPTRG00000043814	-	82	75.676	Pan_troglodytes
ENSAPOG00000003377	snrpf	70	97.753	ENSPKIG00000014784	snrpf	98	97.753	Paramormyrops_kingsleyae
ENSAPOG00000003377	snrpf	67	97.674	ENSPSIG00000016462	SNRPF	100	97.674	Pelodiscus_sinensis
ENSAPOG00000003377	snrpf	66	98.824	ENSPMGG00000023548	snrpf	100	98.824	Periophthalmus_magnuspinnatus
ENSAPOG00000003377	snrpf	66	97.647	ENSPEMG00000023326	Snrpf	99	97.647	Peromyscus_maniculatus_bairdii
ENSAPOG00000003377	snrpf	66	100.000	ENSPLAG00000023932	snrpf	99	100.000	Poecilia_latipinna
ENSAPOG00000003377	snrpf	66	100.000	ENSPMEG00000003377	snrpf	99	100.000	Poecilia_mexicana
ENSAPOG00000003377	snrpf	66	100.000	ENSPREG00000022635	snrpf	97	100.000	Poecilia_reticulata
ENSAPOG00000003377	snrpf	66	97.647	ENSPPYG00000004847	-	99	97.647	Pongo_abelii
ENSAPOG00000003377	snrpf	66	97.647	ENSPCOG00000023833	-	99	97.647	Propithecus_coquereli
ENSAPOG00000003377	snrpf	66	97.647	ENSPVAG00000009036	SNRPF	99	97.647	Pteropus_vampyrus
ENSAPOG00000003377	snrpf	66	100.000	ENSPNYG00000021712	snrpf	99	100.000	Pundamilia_nyererei
ENSAPOG00000003377	snrpf	66	98.810	ENSPNAG00000019117	snrpf	99	98.810	Pygocentrus_nattereri
ENSAPOG00000003377	snrpf	66	97.647	ENSRNOG00000005556	Snrpf	99	97.647	Rattus_norvegicus
ENSAPOG00000003377	snrpf	58	94.595	ENSRBIG00000030414	-	86	94.595	Rhinopithecus_bieti
ENSAPOG00000003377	snrpf	58	94.595	ENSRROG00000021975	-	86	94.595	Rhinopithecus_roxellana
ENSAPOG00000003377	snrpf	55	60.563	YPR182W	SMX3	83	60.563	Saccharomyces_cerevisiae
ENSAPOG00000003377	snrpf	60	77.500	ENSSBOG00000027638	-	90	77.500	Saimiri_boliviensis_boliviensis
ENSAPOG00000003377	snrpf	59	81.333	ENSSBOG00000032297	-	85	82.432	Saimiri_boliviensis_boliviensis
ENSAPOG00000003377	snrpf	66	97.647	ENSSBOG00000036179	-	99	97.647	Saimiri_boliviensis_boliviensis
ENSAPOG00000003377	snrpf	66	96.471	ENSSBOG00000012868	-	99	96.471	Saimiri_boliviensis_boliviensis
ENSAPOG00000003377	snrpf	66	97.647	ENSSHAG00000012294	SNRPF	77	97.647	Sarcophilus_harrisii
ENSAPOG00000003377	snrpf	51	98.462	ENSSFOG00015021523	snrpf	97	98.462	Scleropages_formosus
ENSAPOG00000003377	snrpf	66	98.824	ENSSMAG00000005533	snrpf	98	98.824	Scophthalmus_maximus
ENSAPOG00000003377	snrpf	50	100.000	ENSSDUG00000016283	snrpf	76	100.000	Seriola_dumerili
ENSAPOG00000003377	snrpf	64	69.512	ENSSLDG00000003885	-	93	72.368	Seriola_lalandi_dorsalis
ENSAPOG00000003377	snrpf	66	100.000	ENSSLDG00000005119	snrpf	98	100.000	Seriola_lalandi_dorsalis
ENSAPOG00000003377	snrpf	66	97.619	ENSSPUG00000014590	-	99	97.619	Sphenodon_punctatus
ENSAPOG00000003377	snrpf	66	100.000	ENSSPAG00000003283	snrpf	97	100.000	Stegastes_partitus
ENSAPOG00000003377	snrpf	66	97.647	ENSSSCG00000000895	SNRPF	99	97.647	Sus_scrofa
ENSAPOG00000003377	snrpf	54	98.551	ENSTRUG00000014956	snrpf	100	98.551	Takifugu_rubripes
ENSAPOG00000003377	snrpf	66	98.824	ENSTNIG00000012672	snrpf	99	98.824	Tetraodon_nigroviridis
ENSAPOG00000003377	snrpf	58	70.270	ENSTTRG00000006070	SNRPF	86	70.270	Tursiops_truncatus
ENSAPOG00000003377	snrpf	66	84.706	ENSUAMG00000001101	-	87	86.486	Ursus_americanus
ENSAPOG00000003377	snrpf	66	97.647	ENSUAMG00000008176	-	99	97.647	Ursus_americanus
ENSAPOG00000003377	snrpf	58	86.486	ENSUMAG00000006177	-	87	86.486	Ursus_maritimus
ENSAPOG00000003377	snrpf	66	97.647	ENSUMAG00000003528	-	99	97.647	Ursus_maritimus
ENSAPOG00000003377	snrpf	66	97.647	ENSVPAG00000008712	-	99	97.647	Vicugna_pacos
ENSAPOG00000003377	snrpf	60	89.610	ENSVVUG00000023821	-	95	89.189	Vulpes_vulpes
ENSAPOG00000003377	snrpf	58	75.000	ENSXETG00000021630	snrpf	87	75.000	Xenopus_tropicalis
ENSAPOG00000003377	snrpf	68	96.552	ENSXCOG00000013860	snrpf	100	96.552	Xiphophorus_couchianus
ENSAPOG00000003377	snrpf	66	100.000	ENSXMAG00000015448	snrpf	99	100.000	Xiphophorus_maculatus