EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAPOG00000003380 (Gene tree)
Gene ID: 110959395
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4-like
Gene Type: protein_coding
Species: Acanthochromis_polyacanthus
Status: putative
Strand: Plus strand
Length: 8184 bases
Position: chrMVNR01000689.1:282936-291119
Accession: 110959395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAPOP00000022285	RRM_5	PF13893.6	9.3e-11	1	2
ENSAPOP00000022285	RRM_5	PF13893.6	9.3e-11	2	2
ENSAPOP00000022315	RRM_5	PF13893.6	1.1e-10	1	2
ENSAPOP00000022315	RRM_5	PF13893.6	1.1e-10	2	2
ENSAPOP00000022285	RRM_1	PF00076.22	3.4e-33	1	2
ENSAPOP00000022285	RRM_1	PF00076.22	3.4e-33	2	2
ENSAPOP00000022315	RRM_1	PF00076.22	3.9e-33	1	2
ENSAPOP00000022315	RRM_1	PF00076.22	3.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAPOT00000014173	-	1856	XM_022206250	ENSAPOP00000022315	549 (aa)	XP_022061942	UPI000B8F656A
ENSAPOT00000014160	-	1775	-	ENSAPOP00000022285	522 (aa)	-	-

Gene Model

Click here to download ENSAPOG00000003380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAPOG00000003380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAPOG00000003380	-	71	63.177	ENSAPOG00000021712	rbm14b	69	63.177

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAPOG00000003380	-	100	89.837	ENSACIG00000021173	-	99	90.381	Amphilophus_citrinellus
ENSAPOG00000003380	-	73	61.806	ENSACIG00000000381	rbm14b	65	63.082	Amphilophus_citrinellus
ENSAPOG00000003380	-	100	98.084	ENSAOCG00000001659	-	100	98.084	Amphiprion_ocellaris
ENSAPOG00000003380	-	71	63.441	ENSAOCG00000008941	rbm14b	82	56.359	Amphiprion_ocellaris
ENSAPOG00000003380	-	100	97.996	ENSAPEG00000016988	-	100	97.996	Amphiprion_percula
ENSAPOG00000003380	-	71	63.441	ENSAPEG00000003161	rbm14b	82	55.860	Amphiprion_percula
ENSAPOG00000003380	-	69	59.416	ENSATEG00000003034	rbm14b	78	58.313	Anabas_testudineus
ENSAPOG00000003380	-	99	90.875	ENSATEG00000009700	-	97	90.875	Anabas_testudineus
ENSAPOG00000003380	-	99	91.439	ENSACLG00000009112	-	96	91.439	Astatotilapia_calliptera
ENSAPOG00000003380	-	74	47.942	ENSACLG00000014355	rbm14b	80	49.383	Astatotilapia_calliptera
ENSAPOG00000003380	-	74	61.538	ENSAMXG00000007233	rbm14a	83	61.538	Astyanax_mexicanus
ENSAPOG00000003380	-	71	60.208	ENSAMXG00000031225	rbm14b	86	48.408	Astyanax_mexicanus
ENSAPOG00000003380	-	99	85.818	ENSCSEG00000019690	-	99	86.182	Cynoglossus_semilaevis
ENSAPOG00000003380	-	69	54.567	ENSCSEG00000000357	rbm14b	80	53.167	Cynoglossus_semilaevis
ENSAPOG00000003380	-	74	49.170	ENSCVAG00000013776	rbm14b	84	49.793	Cyprinodon_variegatus
ENSAPOG00000003380	-	99	86.282	ENSCVAG00000014858	-	99	85.740	Cyprinodon_variegatus
ENSAPOG00000003380	-	68	61.538	ENSDARG00000103834	rbm14b	81	47.992	Danio_rerio
ENSAPOG00000003380	-	74	60.660	ENSDARG00000012723	rbm14a	80	60.560	Danio_rerio
ENSAPOG00000003380	-	88	58.483	ENSELUG00000023633	rbm14a	81	59.811	Esox_lucius
ENSAPOG00000003380	-	74	62.191	ENSELUG00000004690	rbm14b	78	62.191	Esox_lucius
ENSAPOG00000003380	-	99	84.877	ENSFHEG00000020913	-	99	84.499	Fundulus_heteroclitus
ENSAPOG00000003380	-	74	48.340	ENSFHEG00000021265	rbm14b	83	49.170	Fundulus_heteroclitus
ENSAPOG00000003380	-	73	80.729	ENSGMOG00000010840	-	79	80.729	Gadus_morhua
ENSAPOG00000003380	-	73	61.806	ENSGAFG00000001924	rbm14b	83	46.901	Gambusia_affinis
ENSAPOG00000003380	-	100	84.699	ENSGAFG00000004455	-	99	86.312	Gambusia_affinis
ENSAPOG00000003380	-	94	90.239	ENSGACG00000020440	-	94	90.239	Gasterosteus_aculeatus
ENSAPOG00000003380	-	99	91.439	ENSHBUG00000003665	-	96	91.439	Haplochromis_burtoni
ENSAPOG00000003380	-	74	47.942	ENSHBUG00000016754	rbm14b	80	49.383	Haplochromis_burtoni
ENSAPOG00000003380	-	79	53.756	ENSHCOG00000012571	rbm14b	99	67.500	Hippocampus_comes
ENSAPOG00000003380	-	99	77.467	ENSHCOG00000004071	-	99	79.065	Hippocampus_comes
ENSAPOG00000003380	-	74	55.875	ENSIPUG00000021256	rbm14a	83	55.769	Ictalurus_punctatus
ENSAPOG00000003380	-	68	61.039	ENSIPUG00000009089	rbm14b	86	48.195	Ictalurus_punctatus
ENSAPOG00000003380	-	100	86.260	ENSKMAG00000008514	-	100	86.641	Kryptolebias_marmoratus
ENSAPOG00000003380	-	53	61.458	ENSKMAG00000020444	rbm14b	83	46.392	Kryptolebias_marmoratus
ENSAPOG00000003380	-	55	60.943	ENSLBEG00000027934	rbm14b	65	60.943	Labrus_bergylta
ENSAPOG00000003380	-	99	87.956	ENSLBEG00000001217	-	99	88.139	Labrus_bergylta
ENSAPOG00000003380	-	70	63.004	ENSMAMG00000014394	rbm14b	78	48.447	Mastacembelus_armatus
ENSAPOG00000003380	-	99	89.170	ENSMAMG00000021313	-	99	88.989	Mastacembelus_armatus
ENSAPOG00000003380	-	74	47.942	ENSMZEG00005020834	rbm14b	82	49.383	Maylandia_zebra
ENSAPOG00000003380	-	99	91.439	ENSMZEG00005001201	-	99	91.439	Maylandia_zebra
ENSAPOG00000003380	-	99	86.131	ENSMMOG00000014501	-	99	87.409	Mola_mola
ENSAPOG00000003380	-	73	56.944	ENSMMOG00000012912	rbm14b	87	45.530	Mola_mola
ENSAPOG00000003380	-	74	47.942	ENSNBRG00000003378	rbm14b	82	49.383	Neolamprologus_brichardi
ENSAPOG00000003380	-	99	90.893	ENSNBRG00000004960	-	99	90.893	Neolamprologus_brichardi
ENSAPOG00000003380	-	69	58.886	ENSONIG00000013035	rbm14b	82	58.561	Oreochromis_niloticus
ENSAPOG00000003380	-	99	79.242	ENSONIG00000008557	-	94	89.103	Oreochromis_niloticus
ENSAPOG00000003380	-	74	50.413	ENSORLG00000008051	rbm14b	83	49.896	Oryzias_latipes
ENSAPOG00000003380	-	99	87.044	ENSORLG00000001900	-	99	86.564	Oryzias_latipes
ENSAPOG00000003380	-	99	87.044	ENSORLG00020019144	-	99	86.564	Oryzias_latipes_hni
ENSAPOG00000003380	-	74	50.518	ENSORLG00020005551	rbm14b	80	49.585	Oryzias_latipes_hni
ENSAPOG00000003380	-	74	50.207	ENSORLG00015022683	rbm14b	83	49.689	Oryzias_latipes_hsok
ENSAPOG00000003380	-	99	87.044	ENSORLG00015000082	-	99	86.861	Oryzias_latipes_hsok
ENSAPOG00000003380	-	70	55.814	ENSOMEG00000000910	rbm14b	78	56.391	Oryzias_melastigma
ENSAPOG00000003380	-	80	87.952	ENSOMEG00000006508	-	94	93.197	Oryzias_melastigma
ENSAPOG00000003380	-	77	50.826	ENSPKIG00000009078	rbm14b	89	51.240	Paramormyrops_kingsleyae
ENSAPOG00000003380	-	73	61.806	ENSPMGG00000013064	rbm14b	67	62.857	Periophthalmus_magnuspinnatus
ENSAPOG00000003380	-	80	80.430	ENSPMGG00000018869	-	94	86.667	Periophthalmus_magnuspinnatus
ENSAPOG00000003380	-	74	49.174	ENSPFOG00000003614	rbm14b	83	49.587	Poecilia_formosa
ENSAPOG00000003380	-	99	85.551	ENSPFOG00000004843	-	99	86.312	Poecilia_formosa
ENSAPOG00000003380	-	74	47.934	ENSPLAG00000001395	rbm14b	83	48.554	Poecilia_latipinna
ENSAPOG00000003380	-	99	85.551	ENSPLAG00000017359	-	99	86.312	Poecilia_latipinna
ENSAPOG00000003380	-	74	48.347	ENSPMEG00000012911	rbm14b	83	48.554	Poecilia_mexicana
ENSAPOG00000003380	-	99	86.076	ENSPMEG00000004894	-	99	86.799	Poecilia_mexicana
ENSAPOG00000003380	-	99	85.932	ENSPREG00000007274	-	99	86.692	Poecilia_reticulata
ENSAPOG00000003380	-	55	60.943	ENSPREG00000003013	rbm14b	83	48.554	Poecilia_reticulata
ENSAPOG00000003380	-	74	49.383	ENSPNYG00000023605	rbm14b	82	50.000	Pundamilia_nyererei
ENSAPOG00000003380	-	99	91.439	ENSPNYG00000015906	-	99	91.439	Pundamilia_nyererei
ENSAPOG00000003380	-	74	59.135	ENSPNAG00000012473	rbm14a	84	58.894	Pygocentrus_nattereri
ENSAPOG00000003380	-	69	61.034	ENSPNAG00000001977	rbm14b	83	48.517	Pygocentrus_nattereri
ENSAPOG00000003380	-	70	51.016	ENSSFOG00015023796	rbm14b	84	50.216	Scleropages_formosus
ENSAPOG00000003380	-	69	63.194	ENSSMAG00000004522	rbm14b	79	64.516	Scophthalmus_maximus
ENSAPOG00000003380	-	100	90.893	ENSSMAG00000002055	-	99	91.803	Scophthalmus_maximus
ENSAPOG00000003380	-	73	61.806	ENSSDUG00000007975	rbm14b	65	63.082	Seriola_dumerili
ENSAPOG00000003380	-	99	91.516	ENSSDUG00000020756	-	99	92.419	Seriola_dumerili
ENSAPOG00000003380	-	73	61.806	ENSSLDG00000006472	rbm14b	65	63.082	Seriola_lalandi_dorsalis
ENSAPOG00000003380	-	99	91.023	ENSSLDG00000006311	-	99	91.921	Seriola_lalandi_dorsalis
ENSAPOG00000003380	-	73	61.806	ENSSPAG00000004231	rbm14b	81	46.817	Stegastes_partitus
ENSAPOG00000003380	-	100	95.802	ENSSPAG00000010825	-	99	95.100	Stegastes_partitus
ENSAPOG00000003380	-	99	80.344	ENSTRUG00000009504	-	93	80.344	Takifugu_rubripes
ENSAPOG00000003380	-	72	61.806	ENSTRUG00000005716	rbm14b	83	47.531	Takifugu_rubripes
ENSAPOG00000003380	-	69	54.111	ENSTNIG00000006844	rbm14b	79	54.094	Tetraodon_nigroviridis
ENSAPOG00000003380	-	90	78.166	ENSTNIG00000000058	-	99	78.166	Tetraodon_nigroviridis
ENSAPOG00000003380	-	99	83.903	ENSXCOG00000006825	-	99	83.903	Xiphophorus_couchianus
ENSAPOG00000003380	-	99	86.076	ENSXMAG00000000338	-	99	86.618	Xiphophorus_maculatus
ENSAPOG00000003380	-	74	48.347	ENSXMAG00000008390	rbm14b	83	48.760	Xiphophorus_maculatus